RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeastyeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APL4YPR029C TAR1Q8TGM6 124 aa2.48□□□□□ -2.01
APL4YPR029C LCL2Q08045 131 aa2.48□□□□□ -2.01
APL4YPR029C PAU20Q08322 120 aa2.48□□□□□ -2.01
APL4YPR029C YKL018C-AQ3E7A7 99 aa2.48□□□□□ -2.01
APL4YPR029C SLH1P53327 1967 aaKnown RBP2.48□□□□□ -2.01
APL4YPR029C HKR1P41809 1802 aa2.47□□□□□ -2.01
APL4YPR029C RPS11AP0CX47 156 aaKnown RBP2.47□□□□□ -2.01
APL4YPR029C RPS11BP0CX48 156 aaKnown RBP2.47□□□□□ -2.01
APL4YPR029C YDR210WQ03482 75 aa2.47□□□□□ -2.01
APL4YPR029C YDR182W-AQ3E796 67 aa2.47□□□□□ -2.01
APL4YPR029C CCW12Q12127 133 aa2.46□□□□□ -2.02
APL4YPR029C YBR219CP38317 127 aa2.45□□□□□ -2.02
APL4YPR029C FAS1P07149 2051 aaKnown RBP2.44□□□□□ -2.02
APL4YPR029C MRPS12P53732 153 aa2.43□□□□□ -2.02
APL4YPR029C YGR240C-AQ3E786 66 aa2.43□□□□□ -2.02
APL4YPR029C YNL042W-BQ3E7Z2 85 aa2.42□□□□□ -2.02
APL4YPR029C YDL022C-AP0C5L6 82 aa2.41□□□□□ -2.02
APL4YPR029C HUB1Q6Q546 73 aa2.41□□□□□ -2.02
APL4YPR029C YPR096CO13587 100 aa2.4□□□□□ -2.03
APL4YPR029C AGA2P32781 87 aa2.4□□□□□ -2.03
APL4YPR029C YEL008WP40001 126 aa2.4□□□□□ -2.03
APL4YPR029C ATP17Q06405 101 aa2.4□□□□□ -2.03
APL4YPR029C YOR032W-AQ8TGS1 66 aa2.4□□□□□ -2.03
APL4YPR029C STT4P37297 1900 aa2.39□□□□□ -2.03
APL4YPR029C YCR001WP25347 104 aa2.39□□□□□ -2.03
APL4YPR029C RPS30AP0CX33 63 aaKnown RBP2.39□□□□□ -2.03
APL4YPR029C RPS30BP0CX34 63 aaKnown RBP2.39□□□□□ -2.03
APL4YPR029C FIG2P25653 1609 aa2.38□□□□□ -2.03
APL4YPR029C YJL009WP47078 108 aa2.37□□□□□ -2.03
APL4YPR029C CYR1P08678 2026 aaKnown RBP2.37□□□□□ -2.03
APL4YPR029C AQY2P0CD90 149 aa2.36□□□□□ -2.03
APL4YPR029C SGF11Q03067 99 aa2.36□□□□□ -2.03
APL4YPR029C EDC1P53080 175 aaPredicted RBP2.36□□□□□ -2.03
APL4YPR029C YOR034C-AQ3E735 80 aa2.36□□□□□ -2.03
APL4YPR029C YMR122W-AQ3E842 84 aa2.36□□□□□ -2.03
APL4YPR029C YLR255CO13574 117 aa2.35□□□□□ -2.03
APL4YPR029C YNL122CP53921 115 aaPredicted RBP2.35□□□□□ -2.03
APL4YPR029C YMR007WQ03675 126 aa2.35□□□□□ -2.03
APL4YPR029C YNL146C-AQ3E7Z1 64 aa2.35□□□□□ -2.03
APL4YPR029C YCL042WP25572 119 aa2.35□□□□□ -2.03
APL4YPR029C COA2Q3E823 68 aa2.35□□□□□ -2.03
APL4YPR029C YOL166W-AQ8TGJ1 51 aa2.35□□□□□ -2.03
APL4YPR029C YNL190WP53872 204 aa2.34□□□□□ -2.03
APL4YPR029C YIL086CP40503 102 aa2.34□□□□□ -2.04
APL4YPR029C YOL097W-AQ3E7Y9 61 aa2.34□□□□□ -2.04
APL4YPR029C YOR192C-CQ3E736 78 aa2.33□□□□□ -2.04
APL4YPR029C YBR201C-AQ2V2Q3 67 aa2.32□□□□□ -2.04
APL4YPR029C ATP18P81450 59 aa2.32□□□□□ -2.04
APL4YPR029C MGR2Q02889 113 aa2.32□□□□□ -2.04
APL4YPR029C SHU1P38751 150 aa2.31□□□□□ -2.04
APL4YPR029C Q0032Q9ZZX7 96 aa2.3□□□□□ -2.04
APL4YPR029C CDC39P25655 2108 aaKnown RBP2.3□□□□□ -2.04
APL4YPR029C SDH6Q3E785 79 aa2.3□□□□□ -2.04
APL4YPR029C YMR141CP40211 102 aa2.29□□□□□ -2.04
APL4YPR029C LCL1Q02786 101 aa2.28□□□□□ -2.04
APL4YPR029C YOR072WQ08486 104 aa2.28□□□□□ -2.04
APL4YPR029C YPR108W-AQ3E7B3 70 aa2.28□□□□□ -2.04
APL4YPR029C MVB12P42939 101 aa2.27□□□□□ -2.05
APL4YPR029C YJR107C-AP0CT86 78 aa2.26□□□□□ -2.05
APL4YPR029C TOS6P48560 102 aa2.26□□□□□ -2.05
APL4YPR029C COX7P10174 60 aa2.26□□□□□ -2.05
APL4YPR029C YMR001C-AQ8TGS9 76 aa2.25□□□□□ -2.05
APL4YPR029C YLR157W-DP0CE99 70 aa2.24□□□□□ -2.05
APL4YPR029C YGL258W-AQ3E740 77 aa2.24□□□□□ -2.05
APL4YPR029C HUG1Q6Q5K6 68 aa2.24□□□□□ -2.05
APL4YPR029C YHR086W-AQ3E746 53 aa2.23□□□□□ -2.05
APL4YPR029C YLR342W-AQ3E810 57 aa2.22□□□□□ -2.05
APL4YPR029C YBL039W-BP0C268 59 aa2.21□□□□□ -2.06
APL4YPR029C BRR2P32639 2163 aaKnown RBP2.2□□□□□ -2.06
APL4YPR029C YAR064WP39563 99 aa2.2□□□□□ -2.06
APL4YPR029C YJR128WP47162 119 aa2.2□□□□□ -2.06
APL4YPR029C YDL012CQ12489 107 aa2.19□□□□□ -2.06
APL4YPR029C YOR008C-AQ3E7B9 74 aa2.19□□□□□ -2.06
APL4YPR029C YOR011W-AQ3E807 68 aa2.19□□□□□ -2.06
APL4YPR029C YHR212W-AP0CX91 67 aa2.18□□□□□ -2.06
APL4YPR029C YIL102CP40488 101 aa2.18□□□□□ -2.06
APL4YPR029C RPL38P49167 78 aaKnown RBP2.18□□□□□ -2.06
APL4YPR029C BPH1P25356 2167 aa2.18□□□□□ -2.06
APL4YPR029C TOM7P53507 60 aa2.17□□□□□ -2.06
APL4YPR029C YBR200W-AQ3E755 54 aa2.17□□□□□ -2.06
APL4YPR029C YOL013W-AP0C272 63 aaPredicted RBP2.16□□□□□ -2.06
APL4YPR029C YGR025WP53216 100 aa2.14□□□□□ -2.07
APL4YPR029C NCE101Q02820 53 aa2.14□□□□□ -2.07
APL4YPR029C YPR010C-AA5Z2X5 72 aa2.12□□□□□ -2.07
APL4YPR029C HHY1P39982 102 aa2.12□□□□□ -2.07
APL4YPR029C YBR072C-AQ3E794 53 aa2.11□□□□□ -2.07
APL4YPR029C YOR394C-AQ8TGJ0 55 aa2.11□□□□□ -2.07
APL4YPR029C RPC10P40422 70 aa2.1□□□□□ -2.07
APL4YPR029C ACC1Q00955 2233 aaKnown RBP2.1□□□□□ -2.07
APL4YPR029C HUA1P40325 198 aa2.09□□□□□ -2.07
APL4YPR029C YFR009W-AP0C5M9 85 aa2.09□□□□□ -2.08
APL4YPR029C GIS2P53849 153 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
APL4YPR029C OLI1P61829 76 aa2.09□□□□□ -2.08
APL4YPR029C YBR230W-AQ3E762 66 aa2.08□□□□□ -2.08
APL4YPR029C BLM10P43583 2143 aa2.07□□□□□ -2.08
APL4YPR029C YLR307C-AQ3E825 87 aa2.07□□□□□ -2.08
APL4YPR029C RPL29P05747 59 aaPredicted RBP2.06□□□□□ -2.08
APL4YPR029C YLL006W-AQ3E814 58 aa2.06□□□□□ -2.08
APL4YPR029C SEC16P48415 2195 aaKnown RBP2.04□□□□□ -2.08
APL4YPR029C YHR213W-BQ8TGK1 99 aa2.03□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 80.8 ms