RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W YFR032C-BQ8TGU2 87 aa2.6□□□□□ -1.99
SWI1YPL016W YSF3P0C074 85 aaPredicted RBP2.6□□□□□ -1.99
SWI1YPL016W YEL008WP40001 126 aa2.59□□□□□ -1.99
SWI1YPL016W YGR045CP53229 120 aa2.59□□□□□ -1.99
SWI1YPL016W LIP1Q03579 150 aa2.59□□□□□ -1.99
SWI1YPL016W YPR117WQ06116 2489 aa2.59□□□□□ -1.99
SWI1YPL016W PRP8P33334 2413 aaKnown RBP2.59□□□□□ -1.99
SWI1YPL016W FYV5P25585 152 aa2.59□□□□□ -1.99
SWI1YPL016W SPC1P46965 94 aa2.59□□□□□ -1.99
SWI1YPL016W DDR48P18899 430 aaKnown RBP2.59□□□□□ -2
SWI1YPL016W YER084WP40057 128 aa2.58□□□□□ -2
SWI1YPL016W YPS5P53057 165 aa2.58□□□□□ -2
SWI1YPL016W YMR254CQ04838 102 aa2.58□□□□□ -2
SWI1YPL016W YJR107C-AP0CT86 78 aa2.58□□□□□ -2
SWI1YPL016W RPL38P49167 78 aaKnown RBP2.58□□□□□ -2
SWI1YPL016W YOR008C-AQ3E7B9 74 aa2.58□□□□□ -2
SWI1YPL016W YBR200W-AQ3E755 54 aa2.57□□□□□ -2
SWI1YPL016W YLR342W-AQ3E810 57 aa2.57□□□□□ -2
SWI1YPL016W YNL042W-BQ3E7Z2 85 aa2.57□□□□□ -2
SWI1YPL016W MRPS8Q03799 155 aa2.56□□□□□ -2
SWI1YPL016W OST5Q92316 86 aa2.56□□□□□ -2
SWI1YPL016W LCL2Q08045 131 aa2.56□□□□□ -2
SWI1YPL016W RNH203Q12338 110 aa2.56□□□□□ -2
SWI1YPL016W RPL39P04650 51 aa2.56□□□□□ -2
SWI1YPL016W RPL36BO14455 100 aaKnown RBP2.55□□□□□ -2
SWI1YPL016W RTC6O14464 93 aa2.55□□□□□ -2
SWI1YPL016W RPL36AP05745 100 aaPredicted RBP2.55□□□□□ -2
SWI1YPL016W TSC3Q3E790 80 aa2.55□□□□□ -2
SWI1YPL016W SIP18P50263 79 aa2.54□□□□□ -2
SWI1YPL016W YMR122W-AQ3E842 84 aa2.54□□□□□ -2
SWI1YPL016W YPL278CQ08990 100 aa2.54□□□□□ -2
SWI1YPL016W RPL43AP0CX25 92 aaKnown RBP2.53□□□□□ -2
SWI1YPL016W RPL43BP0CX26 92 aa2.53□□□□□ -2
SWI1YPL016W ATP18P81450 59 aa2.53□□□□□ -2
SWI1YPL016W RRT1P38192 103 aa2.52□□□□□ -2.01
SWI1YPL016W YDR182W-AQ3E796 67 aa2.52□□□□□ -2.01
SWI1YPL016W YDL241WQ07738 123 aa2.52□□□□□ -2.01
SWI1YPL016W YPR010C-AA5Z2X5 72 aa2.51□□□□□ -2.01
SWI1YPL016W UTP20P35194 2493 aaKnown RBP2.51□□□□□ -2.01
SWI1YPL016W TDA2P40045 126 aa2.5□□□□□ -2.01
SWI1YPL016W COX14P39103 70 aa2.5□□□□□ -2.01
SWI1YPL016W YLL006W-AQ3E814 58 aa2.5□□□□□ -2.01
SWI1YPL016W AQY2P0CD90 149 aa2.49□□□□□ -2.01
SWI1YPL016W COX23P38824 151 aa2.49□□□□□ -2.01
SWI1YPL016W YBR144CP34215 104 aa2.49□□□□□ -2.01
SWI1YPL016W YNL122CP53921 115 aaPredicted RBP2.48□□□□□ -2.01
SWI1YPL016W YCL042WP25572 119 aa2.47□□□□□ -2.01
SWI1YPL016W YNL162W-AQ3E7A8 72 aa2.47□□□□□ -2.01
SWI1YPL016W YOL013W-AP0C272 63 aaPredicted RBP2.46□□□□□ -2.02
SWI1YPL016W QCR10P37299 77 aa2.46□□□□□ -2.02
SWI1YPL016W IGD1P43598 195 aa2.46□□□□□ -2.02
SWI1YPL016W SOM1Q05676 74 aa2.46□□□□□ -2.02
SWI1YPL016W CCW12Q12127 133 aa2.45□□□□□ -2.02
SWI1YPL016W YKL065W-AQ2V2P2 73 aa2.45□□□□□ -2.02
SWI1YPL016W TAO3P40468 2376 aa2.45□□□□□ -2.02
SWI1YPL016W MRX7P53869 86 aa2.44□□□□□ -2.02
SWI1YPL016W YDR210WQ03482 75 aa2.44□□□□□ -2.02
SWI1YPL016W AUA1P32450 94 aa2.44□□□□□ -2.02
SWI1YPL016W TAR1Q8TGM6 124 aa2.44□□□□□ -2.02
SWI1YPL016W QCR8P08525 94 aa2.43□□□□□ -2.02
SWI1YPL016W YMR230W-AQ3E7B5 62 aa2.43□□□□□ -2.02
SWI1YPL016W YHR213W-BQ8TGK1 99 aa2.43□□□□□ -2.02
SWI1YPL016W RDS3Q06835 107 aaPredicted RBP2.43□□□□□ -2.02
SWI1YPL016W YJL197C-AP0C5P0 93 aa2.42□□□□□ -2.02
SWI1YPL016W YKR073CP36153 106 aa2.42□□□□□ -2.02
SWI1YPL016W YOR011W-AQ3E807 68 aa2.42□□□□□ -2.02
SWI1YPL016W YHR125WP38831 101 aa2.42□□□□□ -2.02
SWI1YPL016W YIL102CP40488 101 aa2.42□□□□□ -2.02
SWI1YPL016W YGL149WP53116 101 aa2.42□□□□□ -2.02
SWI1YPL016W BSC4P53841 131 aa2.42□□□□□ -2.02
SWI1YPL016W YCR095W-AQ3E787 52 aa2.41□□□□□ -2.02
SWI1YPL016W YMR001C-AQ8TGS9 76 aa2.41□□□□□ -2.02
SWI1YPL016W YCL048W-AQ2V2Q2 79 aa2.4□□□□□ -2.02
SWI1YPL016W YLR255CO13574 117 aa2.4□□□□□ -2.03
SWI1YPL016W GIS2P53849 153 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
SWI1YPL016W YCR001WP25347 104 aa2.4□□□□□ -2.03
SWI1YPL016W YDL012CQ12489 107 aa2.39□□□□□ -2.03
SWI1YPL016W Q0032Q9ZZX7 96 aa2.39□□□□□ -2.03
SWI1YPL016W CMC4Q3E7A9 73 aa2.39□□□□□ -2.03
SWI1YPL016W YLR157W-DP0CE99 70 aa2.38□□□□□ -2.03
SWI1YPL016W YBR027CP38220 110 aa2.38□□□□□ -2.03
SWI1YPL016W YJL133C-AQ3E7A3 74 aa2.38□□□□□ -2.03
SWI1YPL016W YAR023CD6VPM8 179 aa2.36□□□□□ -2.03
SWI1YPL016W YLR307C-AQ3E825 87 aa2.36□□□□□ -2.03
SWI1YPL016W EDC2P40023 145 aaPredicted RBP2.35□□□□□ -2.03
SWI1YPL016W YBR230W-AQ3E762 66 aa2.35□□□□□ -2.03
SWI1YPL016W TOR2P32600 2474 aaKnown RBP2.34□□□□□ -2.03
SWI1YPL016W YLR122CQ12312 125 aa2.34□□□□□ -2.04
SWI1YPL016W YER078W-AQ3E7A2 54 aa2.33□□□□□ -2.04
SWI1YPL016W MRPL39P36533 70 aa2.33□□□□□ -2.04
SWI1YPL016W MEC1P38111 2368 aa2.32□□□□□ -2.04
SWI1YPL016W RPL29P05747 59 aaPredicted RBP2.32□□□□□ -2.04
SWI1YPL016W YNL146C-AQ3E7Z1 64 aa2.32□□□□□ -2.04
SWI1YPL016W ATP17Q06405 101 aa2.32□□□□□ -2.04
SWI1YPL016W YGL014C-AP0C5N1 53 aa2.31□□□□□ -2.04
SWI1YPL016W SPG1P50088 95 aa2.31□□□□□ -2.04
SWI1YPL016W MVB12P42939 101 aa2.31□□□□□ -2.04
SWI1YPL016W YCR043CP25361 127 aa2.3□□□□□ -2.04
SWI1YPL016W YAR064WP39563 99 aa2.3□□□□□ -2.04
SWI1YPL016W YJR128WP47162 119 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 48.4 ms