RNA–Protein interactions for RNA: YNR023W

SNF12, Transcript of 73 kDa subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF12, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF12YNR023W YNL190WP53872 204 aa0.38□□□□□ -2.35
SNF12YNR023W ICY1Q04329 127 aa0.38□□□□□ -2.35
SNF12YNR023W UBC5P15732 148 aa0.37□□□□□ -2.35
SNF12YNR023W MRPL38P35996 138 aaPredicted RBP0.37□□□□□ -2.35
SNF12YNR023W PAU5P43575 122 aa0.37□□□□□ -2.35
SNF12YNR023W YBR090CP38253 122 aa0.36□□□□□ -2.35
SNF12YNR023W YBR292CP38357 123 aa0.36□□□□□ -2.35
SNF12YNR023W PAU20Q08322 120 aa0.36□□□□□ -2.35
SNF12YNR023W ROX3P25046 220 aa0.35□□□□□ -2.35
SNF12YNR023W RGI1P40043 161 aaPredicted RBP0.35□□□□□ -2.35
SNF12YNR023W MIX14Q04341 121 aa0.35□□□□□ -2.35
SNF12YNR023W PAU6P0CE90 120 aa0.35□□□□□ -2.35
SNF12YNR023W PAU18P0CE91 120 aa0.35□□□□□ -2.35
SNF12YNR023W YFR010W-AP0C5N0 62 aa0.33□□□□□ -2.36
SNF12YNR023W RPS27AP35997 82 aaKnown RBP0.33□□□□□ -2.36
SNF12YNR023W ATX1P38636 73 aa0.33□□□□□ -2.36
SNF12YNR023W RPS27BP38711 82 aa0.33□□□□□ -2.36
SNF12YNR023W RSM19P53733 91 aaPredicted RBP0.33□□□□□ -2.36
SNF12YNR023W YNR034W-AQ3E841 98 aa0.33□□□□□ -2.36
SNF12YNR023W AIM19P40502 157 aa0.33□□□□□ -2.36
SNF12YNR023W PAU1P0CE88 120 aa0.32□□□□□ -2.36
SNF12YNR023W PAU14P0CE89 120 aa0.32□□□□□ -2.36
SNF12YNR023W PAU8P0CE92 120 aa0.32□□□□□ -2.36
SNF12YNR023W PAU11P0CE93 120 aa0.32□□□□□ -2.36
SNF12YNR023W YBL071CP38185 102 aa0.32□□□□□ -2.36
SNF12YNR023W PAU13P38725 120 aa0.32□□□□□ -2.36
SNF12YNR023W RSM18P40033 138 aa0.32□□□□□ -2.36
SNF12YNR023W YNL198CP40166 100 aa0.32□□□□□ -2.36
SNF12YNR023W PAU10Q03050 120 aa0.32□□□□□ -2.36
SNF12YNR023W PAU9Q3E770 120 aa0.32□□□□□ -2.36
SNF12YNR023W YHL005CP38752 130 aa0.3□□□□□ -2.36
SNF12YNR023W RPC10P40422 70 aa0.3□□□□□ -2.36
SNF12YNR023W EMC5P40540 141 aa0.3□□□□□ -2.36
SNF12YNR023W KSH1Q8TGJ3 72 aa0.3□□□□□ -2.36
SNF12YNR023W YOR289WQ12012 251 aaPredicted RBP0.29□□□□□ -2.36
SNF12YNR023W HMRA1P0CY11 126 aa0.28□□□□□ -2.36
SNF12YNR023W PAU4P53427 120 aa0.28□□□□□ -2.36
SNF12YNR023W YHR214C-DP0CX93 97 aa0.27□□□□□ -2.37
SNF12YNR023W SPC1P46965 94 aa0.27□□□□□ -2.37
SNF12YNR023W FYV7Q12247 151 aa0.27□□□□□ -2.37
SNF12YNR023W RPL38P49167 78 aaKnown RBP0.26□□□□□ -2.37
SNF12YNR023W NHP10Q03435 203 aa0.26□□□□□ -2.37
SNF12YNR023W YJR107C-AP0CT86 78 aa0.25□□□□□ -2.37
SNF12YNR023W YFR009W-AP0C5M9 85 aa0.24□□□□□ -2.37
SNF12YNR023W SIP18P50263 79 aa0.24□□□□□ -2.37
SNF12YNR023W PDX3P38075 228 aaKnown RBP0.23□□□□□ -2.37
SNF12YNR023W YBR016WP38216 128 aa0.23□□□□□ -2.37
SNF12YNR023W SNU13P39990 126 aaKnown RBP0.23□□□□□ -2.37
SNF12YNR023W COX7P10174 60 aa0.21□□□□□ -2.38
SNF12YNR023W YNL042W-BQ3E7Z2 85 aa0.21□□□□□ -2.38
SNF12YNR023W RRT15Q3E811 62 aa0.21□□□□□ -2.38
SNF12YNR023W MSL1P40567 111 aaPredicted RBP0.21□□□□□ -2.38
SNF12YNR023W YIL134C-AQ45U18 67 aa0.21□□□□□ -2.38
SNF12YNR023W Q0032Q9ZZX7 96 aa0.21□□□□□ -2.38
SNF12YNR023W SGF11Q03067 99 aa0.19□□□□□ -2.38
SNF12YNR023W HOR7Q05827 59 aa0.19□□□□□ -2.38
SNF12YNR023W SUS1Q6WNK7 96 aa0.18□□□□□ -2.38
SNF12YNR023W ZEO1Q08245 113 aa0.18□□□□□ -2.38
SNF12YNR023W BSC4P53841 131 aa0.17□□□□□ -2.38
SNF12YNR023W YOR343CQ12484 108 aa0.17□□□□□ -2.38
SNF12YNR023W YBR201C-AQ2V2Q3 67 aa0.17□□□□□ -2.38
SNF12YNR023W RPL39P04650 51 aa0.16□□□□□ -2.38
SNF12YNR023W YDR029WQ12111 104 aa0.16□□□□□ -2.38
SNF12YNR023W MHF2Q3E829 80 aa0.16□□□□□ -2.38
SNF12YNR023W TOM6P33448 61 aa0.16□□□□□ -2.38
SNF12YNR023W NCE101Q02820 53 aa0.15□□□□□ -2.39
SNF12YNR023W YDR042CQ03205 200 aa0.13□□□□□ -2.39
SNF12YNR023W YPL225WQ08971 146 aaKnown RBP0.13□□□□□ -2.39
SNF12YNR023W YDR034C-AP0C289 58 aa0.13□□□□□ -2.39
SNF12YNR023W YMR105W-AQ8TGS8 64 aa0.13□□□□□ -2.39
SNF12YNR023W NHP2P32495 156 aaPredicted RBP0.11□□□□□ -2.39
SNF12YNR023W YAL065CO13511 128 aa0.1□□□□□ -2.39
SNF12YNR023W SDH6Q3E785 79 aa0.1□□□□□ -2.39
SNF12YNR023W YMR122W-AQ3E842 84 aa0.1□□□□□ -2.39
SNF12YNR023W ATP18P81450 59 aa0.1□□□□□ -2.39
SNF12YNR023W FPR2P32472 135 aa0.09□□□□□ -2.4
SNF12YNR023W YLL066W-BQ8TGJ7 56 aa0.08□□□□□ -2.4
SNF12YNR023W SCP1Q08873 200 aa0.07□□□□□ -2.4
SNF12YNR023W YCL001W-BQ96VH2 84 aa0.07□□□□□ -2.4
SNF12YNR023W YDR381C-AQ3E6R5 114 aa0.07□□□□□ -2.4
SNF12YNR023W TOM7P53507 60 aa0.06□□□□□ -2.4
SNF12YNR023W PAU23Q07987 124 aa0.05□□□□□ -2.4
SNF12YNR023W PAU17Q12370 124 aa0.05□□□□□ -2.4
SNF12YNR023W YKL068W-AQ3E826 78 aa0.05□□□□□ -2.4
SNF12YNR023W ECM12O13529 151 aa0.04□□□□□ -2.4
SNF12YNR023W YGR025WP53216 100 aa0.03□□□□□ -2.4
SNF12YNR023W YCR075W-AQ3E830 75 aa0.03□□□□□ -2.4
SNF12YNR023W Q0017Q9ZZX8 53 aa0.03□□□□□ -2.4
SNF12YNR023W YCR085WP25650 117 aa0.02□□□□□ -2.41
SNF12YNR023W EDC1P53080 175 aaPredicted RBP0.01□□□□□ -2.41
SNF12YNR023W YCR108CQ3E819 63 aa0.01□□□□□ -2.41
SNF12YNR023W YMR082CQ04276 118 aa0.01□□□□□ -2.41
SNF12YNR023W YPR108W-AQ3E7B3 70 aa0.01□□□□□ -2.41
SNF12YNR023W YBR032WP38223 100 aa-0.01□□□□□ -2.41
SNF12YNR023W YOL097W-AQ3E7Y9 61 aa-0.01□□□□□ -2.41
SNF12YNR023W TIM12P32830 109 aa-0.01□□□□□ -2.41
SNF12YNR023W NOP10Q6Q547 58 aaPredicted RBP-0.02□□□□□ -2.41
SNF12YNR023W YPR010C-AA5Z2X5 72 aa-0.03□□□□□ -2.41
SNF12YNR023W YMR175W-AQ3E766 64 aa-0.04□□□□□ -2.42
SNF12YNR023W YOR011W-AQ3E807 68 aa-0.04□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms