RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeastyeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKP2YNL311C ARL3Q02804 198 aa1.18□□□□□ -2.22
SKP2YNL311C YMR103CQ04436 120 aa1.18□□□□□ -2.22
SKP2YNL311C RPL28P02406 149 aaKnown RBP1.17□□□□□ -2.22
SKP2YNL311C YIA6P40556 373 aa1.17□□□□□ -2.22
SKP2YNL311C PAU23Q07987 124 aa1.17□□□□□ -2.22
SKP2YNL311C YDL157CQ12082 118 aa1.17□□□□□ -2.22
SKP2YNL311C MID2P36027 376 aa1.15□□□□□ -2.23
SKP2YNL311C YPR153WQ06537 140 aa1.15□□□□□ -2.23
SKP2YNL311C YIL002W-AQ3E7Z5 69 aa1.15□□□□□ -2.23
SKP2YNL311C YLR255CO13574 117 aa1.14□□□□□ -2.23
SKP2YNL311C RSM19P53733 91 aaPredicted RBP1.14□□□□□ -2.23
SKP2YNL311C YPL261CQ08976 102 aa1.14□□□□□ -2.23
SKP2YNL311C GSP2P32836 220 aaKnown RBP1.14□□□□□ -2.23
SKP2YNL311C DSE2P38844 325 aa1.14□□□□□ -2.23
SKP2YNL311C SNN1P48232 102 aa1.14□□□□□ -2.23
SKP2YNL311C MPC3P53311 146 aa1.14□□□□□ -2.23
SKP2YNL311C VMA9Q3E7B6 73 aa1.14□□□□□ -2.23
SKP2YNL311C YDL022C-AP0C5L6 82 aa1.13□□□□□ -2.23
SKP2YNL311C EDC1P53080 175 aaPredicted RBP1.13□□□□□ -2.23
SKP2YNL311C POP3P53833 195 aaPredicted RBP1.13□□□□□ -2.23
SKP2YNL311C IGO2Q9P305 131 aa1.13□□□□□ -2.23
SKP2YNL311C YLR162WQ06235 118 aa1.12□□□□□ -2.23
SKP2YNL311C ATP14Q12349 124 aa1.12□□□□□ -2.23
SKP2YNL311C UBC12P52491 188 aa1.12□□□□□ -2.23
SKP2YNL311C YJL133C-AQ3E7A3 74 aa1.11□□□□□ -2.23
SKP2YNL311C YJL144WP47009 104 aa1.1□□□□□ -2.23
SKP2YNL311C MIC10Q96VH5 97 aa1.1□□□□□ -2.23
SKP2YNL311C FYV4P38783 130 aaPredicted RBP1.09□□□□□ -2.23
SKP2YNL311C YLR361C-AQ3E795 98 aa1.09□□□□□ -2.24
SKP2YNL311C CYT2Q00873 224 aa1.08□□□□□ -2.24
SKP2YNL311C YOR316C-AQ3E806 69 aa1.08□□□□□ -2.24
SKP2YNL311C SRB6P32570 121 aa1.08□□□□□ -2.24
SKP2YNL311C YHR130CP38834 111 aa1.08□□□□□ -2.24
SKP2YNL311C TSC3Q3E790 80 aa1.08□□□□□ -2.24
SKP2YNL311C AIM4P38305 123 aaPredicted RBP1.06□□□□□ -2.24
SKP2YNL311C YLR050CQ12155 161 aaKnown RBP1.06□□□□□ -2.24
SKP2YNL311C YKL183C-AQ3E765 70 aa1.06□□□□□ -2.24
SKP2YNL311C YKL044WP36092 106 aa1.05□□□□□ -2.24
SKP2YNL311C ISD11Q6Q560 94 aa1.05□□□□□ -2.24
SKP2YNL311C YHR213W-BQ8TGK1 99 aa1.05□□□□□ -2.24
SKP2YNL311C SEC11P15367 167 aa1.04□□□□□ -2.24
SKP2YNL311C HHO1P53551 258 aa1.04□□□□□ -2.24
SKP2YNL311C YNR077CP53758 84 aa1.04□□□□□ -2.24
SKP2YNL311C YOR034C-AQ3E735 80 aa1.04□□□□□ -2.24
SKP2YNL311C YBL008W-AQ3E821 79 aa1.04□□□□□ -2.24
SKP2YNL311C VMA21P41806 77 aa1.03□□□□□ -2.24
SKP2YNL311C RPL36AP05745 100 aaPredicted RBP1.01□□□□□ -2.25
SKP2YNL311C YHR032W-AP0C5N6 59 aa1.01□□□□□ -2.25
SKP2YNL311C ICS3P47034 131 aa1.01□□□□□ -2.25
SKP2YNL311C COA6Q3E846 104 aa1□□□□□ -2.25
SKP2YNL311C YHR125WP38831 101 aa1□□□□□ -2.25
SKP2YNL311C ATG8P38182 117 aaRIP-Chip data0.99□□□□□ -2.25not detected
SKP2YNL311C COX23P38824 151 aa0.99□□□□□ -2.25
SKP2YNL311C YOR304C-AO14468 76 aa0.99□□□□□ -2.25
SKP2YNL311C YBR121C-AP0C5L4 52 aa0.99□□□□□ -2.25
SKP2YNL311C HUR1P45820 110 aa0.99□□□□□ -2.25
SKP2YNL311C TDA2P40045 126 aa0.98□□□□□ -2.25
SKP2YNL311C NSE4P43124 402 aa0.98□□□□□ -2.25
SKP2YNL311C SKI6P46948 246 aaPredicted RBP0.98□□□□□ -2.25
SKP2YNL311C LIP1Q03579 150 aa0.98□□□□□ -2.25
SKP2YNL311C CNL1Q06333 122 aa0.98□□□□□ -2.25
SKP2YNL311C YBL044WP38194 122 aa0.97□□□□□ -2.25
SKP2YNL311C ATP18P81450 59 aa0.97□□□□□ -2.25
SKP2YNL311C EMC6Q12431 108 aa0.97□□□□□ -2.25
SKP2YNL311C YFR009W-AP0C5M9 85 aa0.96□□□□□ -2.26
SKP2YNL311C YHL042WP38729 150 aa0.96□□□□□ -2.26
SKP2YNL311C MRPL44P19956 98 aa0.96□□□□□ -2.26
SKP2YNL311C YFR032C-BQ8TGU2 87 aa0.96□□□□□ -2.26
SKP2YNL311C YJR107C-AP0CT86 78 aa0.95□□□□□ -2.26
SKP2YNL311C YAR064WP39563 99 aa0.95□□□□□ -2.26
SKP2YNL311C YHR086W-AQ3E746 53 aa0.95□□□□□ -2.26
SKP2YNL311C ZEO1Q08245 113 aa0.94□□□□□ -2.26
SKP2YNL311C YPR170W-BP0C5R9 85 aa0.94□□□□□ -2.26
SKP2YNL311C LSO2Q3E772 92 aaKnown RBP0.92□□□□□ -2.26
SKP2YNL311C YIL156W-BQ2V2P4 73 aa0.91□□□□□ -2.26
SKP2YNL311C YCR050CP25630 102 aa0.91□□□□□ -2.26
SKP2YNL311C POP7P38291 140 aa0.91□□□□□ -2.26
SKP2YNL311C MSL1P40567 111 aaPredicted RBP0.91□□□□□ -2.26
SKP2YNL311C COX8P04039 78 aa0.9□□□□□ -2.26
SKP2YNL311C CUE4Q04201 117 aaPredicted RBP0.89□□□□□ -2.27
SKP2YNL311C RPS30AP0CX33 63 aaKnown RBP0.88□□□□□ -2.27
SKP2YNL311C RPS30BP0CX34 63 aaKnown RBP0.88□□□□□ -2.27
SKP2YNL311C CGR1P53188 120 aa0.88□□□□□ -2.27
SKP2YNL311C ELC1Q03071 99 aa0.88□□□□□ -2.27
SKP2YNL311C YOL014WQ08110 124 aa0.88□□□□□ -2.27
SKP2YNL311C YGR146C-AQ8TGT9 53 aa0.88□□□□□ -2.27
SKP2YNL311C OLI1P61829 76 aa0.87□□□□□ -2.27
SKP2YNL311C YLR296WQ05898 108 aa0.87□□□□□ -2.27
SKP2YNL311C GTT1P40582 234 aa0.87□□□□□ -2.27
SKP2YNL311C YML108WQ03759 105 aa0.86□□□□□ -2.27
SKP2YNL311C LSM6Q06406 86 aaKnown RBP0.86□□□□□ -2.27
SKP2YNL311C YER181CP40097 107 aa0.85□□□□□ -2.27
SKP2YNL311C RAD6P06104 172 aa0.85□□□□□ -2.27
SKP2YNL311C ATP20Q12233 115 aa0.84□□□□□ -2.27
SKP2YNL311C YKL065W-AQ2V2P2 73 aa0.83□□□□□ -2.28
SKP2YNL311C YDR381C-AQ3E6R5 114 aa0.83□□□□□ -2.28
SKP2YNL311C YML100W-AQ8TGT0 57 aa0.82□□□□□ -2.28
SKP2YNL311C YIL102CP40488 101 aa0.82□□□□□ -2.28
SKP2YNL311C NAT5Q08689 176 aa0.81□□□□□ -2.28
SKP2YNL311C YOR381W-AQ3E804 55 aa0.81□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms