RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C YBL071CP38185 102 aa0□□□□□ -2.41
SGD1YLR336C RPS12P48589 143 aaKnown RBP0□□□□□ -2.41
SGD1YLR336C YBR016WP38216 128 aa-0□□□□□ -2.41
SGD1YLR336C YER137CP40083 148 aaKnown RBP-0□□□□□ -2.41
SGD1YLR336C ATX1P38636 73 aa-0.01□□□□□ -2.41
SGD1YLR336C YBR090CP38253 122 aa-0.02□□□□□ -2.41
SGD1YLR336C MIX14Q04341 121 aa-0.02□□□□□ -2.41
SGD1YLR336C YFR009W-AP0C5M9 85 aa-0.02□□□□□ -2.41
SGD1YLR336C CSF1Q12150 2958 aa-0.02□□□□□ -2.41
SGD1YLR336C KSH1Q8TGJ3 72 aa-0.03□□□□□ -2.41
SGD1YLR336C SPC1P46965 94 aa-0.04□□□□□ -2.42
SGD1YLR336C YOR289WQ12012 251 aaPredicted RBP-0.04□□□□□ -2.42
SGD1YLR336C PAU1P0CE88 120 aa-0.05□□□□□ -2.42
SGD1YLR336C PAU14P0CE89 120 aa-0.05□□□□□ -2.42
SGD1YLR336C PAU8P0CE92 120 aa-0.05□□□□□ -2.42
SGD1YLR336C PAU11P0CE93 120 aa-0.05□□□□□ -2.42
SGD1YLR336C PAU13P38725 120 aa-0.05□□□□□ -2.42
SGD1YLR336C AIM19P40502 157 aa-0.05□□□□□ -2.42
SGD1YLR336C PAU10Q03050 120 aa-0.05□□□□□ -2.42
SGD1YLR336C NHP10Q03435 203 aa-0.05□□□□□ -2.42
SGD1YLR336C PAU9Q3E770 120 aa-0.05□□□□□ -2.42
SGD1YLR336C YJR107C-AP0CT86 78 aa-0.05□□□□□ -2.42
SGD1YLR336C RRT15Q3E811 62 aa-0.06□□□□□ -2.42
SGD1YLR336C HMRA1P0CY11 126 aa-0.07□□□□□ -2.42
SGD1YLR336C YHL005CP38752 130 aa-0.07□□□□□ -2.42
SGD1YLR336C UTP10P42945 1769 aaKnown RBP-0.07□□□□□ -2.42
SGD1YLR336C PAU4P53427 120 aa-0.08□□□□□ -2.42
SGD1YLR336C RGI1P40043 161 aaPredicted RBP-0.09□□□□□ -2.42
SGD1YLR336C RPL38P49167 78 aaKnown RBP-0.09□□□□□ -2.42
SGD1YLR336C SGF11Q03067 99 aa-0.09□□□□□ -2.42
SGD1YLR336C YIL046W-AQ3E7Z4 54 aa-0.1□□□□□ -2.43
SGD1YLR336C YIL134C-AQ45U18 67 aa-0.1□□□□□ -2.43
SGD1YLR336C Q0032Q9ZZX7 96 aa-0.1□□□□□ -2.43
SGD1YLR336C EMC5P40540 141 aa-0.1□□□□□ -2.43
SGD1YLR336C YNL042W-BQ3E7Z2 85 aa-0.1□□□□□ -2.43
SGD1YLR336C YMR105W-AQ8TGS8 64 aa-0.11□□□□□ -2.43
SGD1YLR336C COX7P10174 60 aa-0.13□□□□□ -2.43
SGD1YLR336C YBR201C-AQ2V2Q3 67 aa-0.13□□□□□ -2.43
SGD1YLR336C TRA1P38811 3744 aa-0.13□□□□□ -2.43
SGD1YLR336C COA2Q3E823 68 aa-0.14□□□□□ -2.43
SGD1YLR336C PDX3P38075 228 aaKnown RBP-0.15□□□□□ -2.43
SGD1YLR336C HKR1P41809 1802 aa-0.15□□□□□ -2.43
SGD1YLR336C YGR025WP53216 100 aa-0.16□□□□□ -2.43
SGD1YLR336C SNU13P39990 126 aaKnown RBP-0.16□□□□□ -2.44
SGD1YLR336C MSL1P40567 111 aaPredicted RBP-0.16□□□□□ -2.44
SGD1YLR336C BSC4P53841 131 aa-0.17□□□□□ -2.44
SGD1YLR336C FYV7Q12247 151 aa-0.17□□□□□ -2.44
SGD1YLR336C STT4P37297 1900 aa-0.17□□□□□ -2.44
SGD1YLR336C BPH1P25356 2167 aa-0.18□□□□□ -2.44
SGD1YLR336C YMR122W-AQ3E842 84 aa-0.18□□□□□ -2.44
SGD1YLR336C YDR042CQ03205 200 aa-0.19□□□□□ -2.44
SGD1YLR336C NHP2P32495 156 aaPredicted RBP-0.2□□□□□ -2.44
SGD1YLR336C TOM6P33448 61 aa-0.2□□□□□ -2.44
SGD1YLR336C YAL065CO13511 128 aa-0.2□□□□□ -2.44
SGD1YLR336C YDR524C-BQ3E6R4 66 aa-0.2□□□□□ -2.44
SGD1YLR336C YCR108CQ3E819 63 aa-0.21□□□□□ -2.44
SGD1YLR336C YHR214C-DP0CX93 97 aa-0.22□□□□□ -2.44
SGD1YLR336C SUS1Q6WNK7 96 aa-0.22□□□□□ -2.44
SGD1YLR336C ATP18P81450 59 aa-0.22□□□□□ -2.45
SGD1YLR336C YHR050W-AQ05451 56 aa-0.22□□□□□ -2.45
SGD1YLR336C YDR029WQ12111 104 aa-0.22□□□□□ -2.45
SGD1YLR336C YDR381C-AQ3E6R5 114 aa-0.22□□□□□ -2.45
SGD1YLR336C SDH6Q3E785 79 aa-0.22□□□□□ -2.45
SGD1YLR336C Q0017Q9ZZX8 53 aa-0.22□□□□□ -2.45
SGD1YLR336C MOT1P32333 1867 aa-0.23□□□□□ -2.45
SGD1YLR336C MHF2Q3E829 80 aa-0.24□□□□□ -2.45
SGD1YLR336C PAU23Q07987 124 aa-0.25□□□□□ -2.45
SGD1YLR336C PAU17Q12370 124 aa-0.25□□□□□ -2.45
SGD1YLR336C FPR2P32472 135 aa-0.25□□□□□ -2.45
SGD1YLR336C ZEO1Q08245 113 aa-0.25□□□□□ -2.45
SGD1YLR336C YOR343CQ12484 108 aa-0.25□□□□□ -2.45
SGD1YLR336C YML054C-AQ3E809 52 aa-0.25□□□□□ -2.45
SGD1YLR336C SCP1Q08873 200 aa-0.26□□□□□ -2.45
SGD1YLR336C YKL068W-AQ3E826 78 aa-0.26□□□□□ -2.45
SGD1YLR336C EDC1P53080 175 aaPredicted RBP-0.27□□□□□ -2.45
SGD1YLR336C YKL018C-AQ3E7A7 99 aa-0.27□□□□□ -2.45
SGD1YLR336C YOR008C-AQ3E7B9 74 aa-0.28□□□□□ -2.45
SGD1YLR336C YMR001C-AQ8TGS9 76 aa-0.28□□□□□ -2.45
SGD1YLR336C POC4Q12245 148 aaPredicted RBP-0.29□□□□□ -2.46
SGD1YLR336C YDR119W-AQ2V2P9 66 aa-0.29□□□□□ -2.46
SGD1YLR336C YOR192C-CQ3E736 78 aa-0.29□□□□□ -2.46
SGD1YLR336C YPR108W-AQ3E7B3 70 aa-0.29□□□□□ -2.46
SGD1YLR336C Q0297Q9ZZV8 51 aa-0.29□□□□□ -2.46
SGD1YLR336C YCR085WP25650 117 aa-0.3□□□□□ -2.46
SGD1YLR336C YPL225WQ08971 146 aaKnown RBP-0.3□□□□□ -2.46
SGD1YLR336C YCR075W-AQ3E830 75 aa-0.3□□□□□ -2.46
SGD1YLR336C NOP10Q6Q547 58 aaPredicted RBP-0.3□□□□□ -2.46
SGD1YLR336C YMR082CQ04276 118 aa-0.31□□□□□ -2.46
SGD1YLR336C YDR246W-AQ3E763 66 aa-0.31□□□□□ -2.46
SGD1YLR336C YBL044WP38194 122 aa-0.32□□□□□ -2.46
SGD1YLR336C LSM2P38203 95 aaKnown RBP-0.32□□□□□ -2.46
SGD1YLR336C ECM12O13529 151 aa-0.33□□□□□ -2.46
SGD1YLR336C YIL156W-BQ2V2P4 73 aa-0.33□□□□□ -2.46
SGD1YLR336C YMR175W-AQ3E766 64 aa-0.33□□□□□ -2.46
SGD1YLR336C YOR072W-BQ3E832 53 aa-0.33□□□□□ -2.46
SGD1YLR336C YCL001W-BQ96VH2 84 aa-0.33□□□□□ -2.46
SGD1YLR336C YBR032WP38223 100 aa-0.34□□□□□ -2.46
SGD1YLR336C YGR035W-AQ45U48 73 aa-0.34□□□□□ -2.46
SGD1YLR336C YDR182W-AQ3E796 67 aa-0.35□□□□□ -2.47
SGD1YLR336C YOL097W-AQ3E7Y9 61 aa-0.36□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms