RNA–Protein interactions for RNA: YHR171W

ATG7, Transcript of Autophagy-related protein and dual specificity member of the E1 family, yeastyeast

Gene ATG7, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG7YHR171W YIL102CP40488 101 aa3.01□□□□□ -1.93
ATG7YHR171W IML1P47170 1584 aa3.01□□□□□ -1.93
ATG7YHR171W DNF3Q12674 1656 aa3□□□□□ -1.93
ATG7YHR171W PDR5P33302 1511 aaKnown RBP3□□□□□ -1.93
ATG7YHR171W TY2B-LR1P0C2J3 1770 aa2.99□□□□□ -1.93
ATG7YHR171W TY2B-FP0CX63 1770 aa2.99□□□□□ -1.93
ATG7YHR171W TY2B-GR2P0CX64 1770 aa2.99□□□□□ -1.93
ATG7YHR171W TY2B-DR2Q03494 1770 aa2.99□□□□□ -1.93
ATG7YHR171W TY2B-OR1Q12113 1770 aa2.99□□□□□ -1.93
ATG7YHR171W TY2B-BQ12491 1770 aa2.99□□□□□ -1.93
ATG7YHR171W TY2B-OR2Q12501 1770 aa2.99□□□□□ -1.93
ATG7YHR171W POL2P21951 2222 aaKnown RBP2.99□□□□□ -1.93
ATG7YHR171W SNQ2P32568 1501 aaKnown RBP2.99□□□□□ -1.93
ATG7YHR171W ATP18P81450 59 aa2.99□□□□□ -1.93
ATG7YHR171W YOR034C-AQ3E735 80 aa2.99□□□□□ -1.93
ATG7YHR171W YCF1P39109 1515 aaKnown RBP2.98□□□□□ -1.93
ATG7YHR171W TY2B-DR3Q07791 1770 aaKnown RBP2.97□□□□□ -1.93
ATG7YHR171W SPT6P23615 1451 aaKnown RBP2.97□□□□□ -1.93
ATG7YHR171W YNL190WP53872 204 aa2.97□□□□□ -1.93
ATG7YHR171W DNF2Q12675 1612 aa2.97□□□□□ -1.93
ATG7YHR171W RPO21P04050 1733 aaKnown RBP2.96□□□□□ -1.94
ATG7YHR171W APC1P53886 1748 aa2.96□□□□□ -1.94
ATG7YHR171W CDC25P04821 1589 aa2.95□□□□□ -1.94
ATG7YHR171W TY3B-GQ99315 1547 aa2.94□□□□□ -1.94
ATG7YHR171W BEM2P39960 2167 aaKnown RBP2.93□□□□□ -1.94
ATG7YHR171W ATP17Q06405 101 aa2.92□□□□□ -1.94
ATG7YHR171W VTH1P40438 1549 aa2.92□□□□□ -1.94
ATG7YHR171W VTH2P40890 1549 aa2.92□□□□□ -1.94
ATG7YHR171W ARO1P08566 1588 aaKnown RBP2.92□□□□□ -1.94
ATG7YHR171W COX7P10174 60 aa2.92□□□□□ -1.94
ATG7YHR171W MMS1Q06211 1407 aa2.91□□□□□ -1.94
ATG7YHR171W YMR141CP40211 102 aa2.91□□□□□ -1.94
ATG7YHR171W BLM10P43583 2143 aa2.9□□□□□ -1.95
ATG7YHR171W YHR213W-BQ8TGK1 99 aa2.9□□□□□ -1.95
ATG7YHR171W SDH6Q3E785 79 aa2.89□□□□□ -1.95
ATG7YHR171W SPO14P36126 1683 aa2.89□□□□□ -1.95
ATG7YHR171W HUA1P40325 198 aa2.88□□□□□ -1.95
ATG7YHR171W RIM15P43565 1770 aa2.88□□□□□ -1.95
ATG7YHR171W RPC10P40422 70 aa2.87□□□□□ -1.95
ATG7YHR171W RPS30AP0CX33 63 aaKnown RBP2.86□□□□□ -1.95
ATG7YHR171W RPS30BP0CX34 63 aaKnown RBP2.86□□□□□ -1.95
ATG7YHR171W AUA1P32450 94 aa2.86□□□□□ -1.95
ATG7YHR171W YOL097W-AQ3E7Y9 61 aa2.86□□□□□ -1.95
ATG7YHR171W BCK1Q01389 1478 aa2.86□□□□□ -1.95
ATG7YHR171W SSK2P53599 1579 aa2.86□□□□□ -1.95
ATG7YHR171W EDC1P53080 175 aaPredicted RBP2.86□□□□□ -1.95
ATG7YHR171W YDR182W-AQ3E796 67 aa2.84□□□□□ -1.96
ATG7YHR171W URA2P07259 2214 aaKnown RBP2.83□□□□□ -1.96
ATG7YHR171W YKL023C-AQ2V2P3 75 aa2.82□□□□□ -1.96
ATG7YHR171W YBR072C-AQ3E794 53 aa2.82□□□□□ -1.96
ATG7YHR171W YPR108W-AQ3E7B3 70 aa2.82□□□□□ -1.96
ATG7YHR171W RPL38P49167 78 aaKnown RBP2.8□□□□□ -1.96
ATG7YHR171W HUB1Q6Q546 73 aa2.79□□□□□ -1.96
ATG7YHR171W YJR107C-AP0CT86 78 aa2.76□□□□□ -1.97
ATG7YHR171W YBT1P32386 1661 aa2.76□□□□□ -1.97
ATG7YHR171W PEP1P32319 1579 aa2.76□□□□□ -1.97
ATG7YHR171W YOL166W-AQ8TGJ1 51 aa2.75□□□□□ -1.97
ATG7YHR171W IRC20Q06554 1556 aa2.74□□□□□ -1.97
ATG7YHR171W YLR146W-AQ2V2P1 62 aa2.74□□□□□ -1.97
ATG7YHR171W YOR192C-CQ3E736 78 aa2.73□□□□□ -1.97
ATG7YHR171W YOR093CQ12275 1648 aa2.72□□□□□ -1.97
ATG7YHR171W RPL43AP0CX25 92 aaKnown RBP2.71□□□□□ -1.98
ATG7YHR171W RPL43BP0CX26 92 aa2.71□□□□□ -1.98
ATG7YHR171W VMR1P38735 1592 aa2.7□□□□□ -1.98
ATG7YHR171W YBR032WP38223 100 aa2.69□□□□□ -1.98
ATG7YHR171W YBL039W-BP0C268 59 aa2.67□□□□□ -1.98
ATG7YHR171W ULS1Q08562 1619 aa2.66□□□□□ -1.98
ATG7YHR171W YBR200W-AQ3E755 54 aa2.65□□□□□ -1.99
ATG7YHR171W NUP188P52593 1655 aaKnown RBP2.63□□□□□ -1.99
ATG7YHR171W USO1P25386 1790 aa2.62□□□□□ -1.99
ATG7YHR171W PDR15Q04182 1529 aaKnown RBP2.62□□□□□ -1.99
ATG7YHR171W RPL37AP49166 88 aaKnown RBP2.61□□□□□ -1.99
ATG7YHR171W SNF2P22082 1703 aa2.61□□□□□ -1.99
ATG7YHR171W YLR157W-EP0CF00 54 aa2.6□□□□□ -1.99
ATG7YHR171W YLR307C-AQ3E825 87 aa2.6□□□□□ -1.99
ATG7YHR171W YMR001C-AQ8TGS9 76 aa2.6□□□□□ -1.99
ATG7YHR171W HKR1P41809 1802 aa2.59□□□□□ -1.99
ATG7YHR171W YLR157W-DP0CE99 70 aa2.58□□□□□ -2
ATG7YHR171W YOL164W-AQ3E7A5 60 aa2.58□□□□□ -2
ATG7YHR171W YOR011W-AQ3E807 68 aa2.57□□□□□ -2
ATG7YHR171W YOR394C-AQ8TGJ0 55 aa2.53□□□□□ -2
ATG7YHR171W RPS27AP35997 82 aaKnown RBP2.52□□□□□ -2.01
ATG7YHR171W KOG1P38873 1557 aa2.52□□□□□ -2.01
ATG7YHR171W THO2P53552 1597 aaKnown RBP2.48□□□□□ -2.01
ATG7YHR171W STU1P38198 1513 aa2.47□□□□□ -2.01
ATG7YHR171W OLI1P61829 76 aa2.45□□□□□ -2.02
ATG7YHR171W NUP192P47054 1683 aa2.42□□□□□ -2.02
ATG7YHR171W YFR009W-AP0C5M9 85 aa2.42□□□□□ -2.02
ATG7YHR171W RKR1Q04781 1562 aa2.41□□□□□ -2.02
ATG7YHR171W YBR016WP38216 128 aa2.41□□□□□ -2.02
ATG7YHR171W NUP170P38181 1502 aa2.39□□□□□ -2.03
ATG7YHR171W RPL37BP51402 88 aaKnown RBP2.38□□□□□ -2.03
ATG7YHR171W YGR025WP53216 100 aa2.38□□□□□ -2.03
ATG7YHR171W YBL044WP38194 122 aa2.3□□□□□ -2.04
ATG7YHR171W SMX2P40204 77 aaKnown RBP2.3□□□□□ -2.04
ATG7YHR171W YBR230W-AQ3E762 66 aa2.29□□□□□ -2.04
ATG7YHR171W YPR010C-AA5Z2X5 72 aa2.28□□□□□ -2.04
ATG7YHR171W RPS27BP38711 82 aa2.28□□□□□ -2.04
ATG7YHR171W SIP18P50263 79 aa2.26□□□□□ -2.05
ATG7YHR171W MLP2P40457 1679 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms