RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C YCR043CP25361 127 aa3.99□□□□□ -1.77
PUP2YGR253C RSM18P40033 138 aa3.99□□□□□ -1.77
PUP2YGR253C OST2P46964 130 aa3.99□□□□□ -1.77
PUP2YGR253C FYV7Q12247 151 aa3.99□□□□□ -1.77
PUP2YGR253C YLR157W-DP0CE99 70 aa3.98□□□□□ -1.77
PUP2YGR253C ELC1Q03071 99 aa3.98□□□□□ -1.77
PUP2YGR253C YAR1P46683 200 aa3.97□□□□□ -1.77
PUP2YGR253C CWC27Q02770 301 aa3.95□□□□□ -1.78
PUP2YGR253C YOL097W-AQ3E7Y9 61 aa3.95□□□□□ -1.78
PUP2YGR253C HUR1P45820 110 aa3.94□□□□□ -1.78
PUP2YGR253C TDA8Q6B2U8 126 aa3.94□□□□□ -1.78
PUP2YGR253C DSE2P38844 325 aa3.93□□□□□ -1.78
PUP2YGR253C NHP2P32495 156 aaPredicted RBP3.92□□□□□ -1.78
PUP2YGR253C CGR1P53188 120 aa3.92□□□□□ -1.78
PUP2YGR253C NAT5Q08689 176 aa3.92□□□□□ -1.78
PUP2YGR253C UIP3P39547 235 aa3.91□□□□□ -1.78
PUP2YGR253C FUN14P18411 198 aa3.9□□□□□ -1.79
PUP2YGR253C YKL069WP36088 180 aa3.9□□□□□ -1.79
PUP2YGR253C YML108WQ03759 105 aa3.9□□□□□ -1.79
PUP2YGR253C YER181CP40097 107 aa3.89□□□□□ -1.79
PUP2YGR253C TSC3Q3E790 80 aa3.89□□□□□ -1.79
PUP2YGR253C RSM19P53733 91 aaPredicted RBP3.88□□□□□ -1.79
PUP2YGR253C FYV12Q08559 129 aa3.87□□□□□ -1.79
PUP2YGR253C TIM11P81449 96 aaPredicted RBP3.86□□□□□ -1.79
PUP2YGR253C POP7P38291 140 aa3.85□□□□□ -1.79
PUP2YGR253C YLR162WQ06235 118 aa3.85□□□□□ -1.79
PUP2YGR253C LSM6Q06406 86 aaKnown RBP3.85□□□□□ -1.79
PUP2YGR253C MIC10Q96VH5 97 aa3.85□□□□□ -1.79
PUP2YGR253C YHR213W-BQ8TGK1 99 aa3.84□□□□□ -1.79
PUP2YGR253C Q0017Q9ZZX8 53 aa3.84□□□□□ -1.79
PUP2YGR253C PAI3P01094 68 aa3.83□□□□□ -1.8
PUP2YGR253C YJR107C-AP0CT86 78 aa3.83□□□□□ -1.8
PUP2YGR253C YLR363W-AQ3E747 85 aa3.82□□□□□ -1.8
PUP2YGR253C YJL133C-AQ3E7A3 74 aa3.82□□□□□ -1.8
PUP2YGR253C ECM19Q06011 112 aa3.81□□□□□ -1.8
PUP2YGR253C YFR009W-AP0C5M9 85 aa3.8□□□□□ -1.8
PUP2YGR253C ATP18P81450 59 aa3.8□□□□□ -1.8
PUP2YGR253C COF1Q03048 143 aaKnown RBP3.8□□□□□ -1.8
PUP2YGR253C YLR296WQ05898 108 aa3.8□□□□□ -1.8
PUP2YGR253C ICS3P47034 131 aa3.78□□□□□ -1.8
PUP2YGR253C YER187WP40102 141 aa3.77□□□□□ -1.81
PUP2YGR253C SHH4Q06236 168 aa3.77□□□□□ -1.81
PUP2YGR253C YJR128WP47162 119 aa3.76□□□□□ -1.81
PUP2YGR253C YDR210WQ03482 75 aa3.74□□□□□ -1.81
PUP2YGR253C YHR073W-AP0C5N7 58 aa3.73□□□□□ -1.81
PUP2YGR253C YLR361C-AQ3E795 98 aa3.73□□□□□ -1.81
PUP2YGR253C YJL009WP47078 108 aa3.72□□□□□ -1.81
PUP2YGR253C SAE3P89114 91 aa3.72□□□□□ -1.81
PUP2YGR253C COX23P38824 151 aa3.71□□□□□ -1.82
PUP2YGR253C YBR182C-AQ8TGU6 64 aa3.71□□□□□ -1.82
PUP2YGR253C YDL085C-AQ3E7B7 68 aaKnown RBP3.7□□□□□ -1.82
PUP2YGR253C EDC1P53080 175 aaPredicted RBP3.69□□□□□ -1.82
PUP2YGR253C YOL014WQ08110 124 aa3.67□□□□□ -1.82
PUP2YGR253C ISD11Q6Q560 94 aa3.66□□□□□ -1.82
PUP2YGR253C YGR164WP53291 111 aa3.65□□□□□ -1.83
PUP2YGR253C YDL012CQ12489 107 aa3.65□□□□□ -1.83
PUP2YGR253C YDR381C-AQ3E6R5 114 aa3.65□□□□□ -1.83
PUP2YGR253C YPR153WQ06537 140 aa3.64□□□□□ -1.83
PUP2YGR253C YIL102C-AQ2V2P5 75 aa3.64□□□□□ -1.83
PUP2YGR253C RPL36AP05745 100 aaPredicted RBP3.63□□□□□ -1.83
PUP2YGR253C GLC8P41818 229 aa3.63□□□□□ -1.83
PUP2YGR253C RPL38P49167 78 aaKnown RBP3.63□□□□□ -1.83
PUP2YGR253C TDA2P40045 126 aa3.62□□□□□ -1.83
PUP2YGR253C YOR316C-AQ3E806 69 aa3.62□□□□□ -1.83
PUP2YGR253C YOR304C-AO14468 76 aa3.61□□□□□ -1.83
PUP2YGR253C YGL034CP53186 121 aa3.61□□□□□ -1.83
PUP2YGR253C YAR064WP39563 99 aa3.6□□□□□ -1.83
PUP2YGR253C YJL144WP47009 104 aa3.6□□□□□ -1.83
PUP2YGR253C YHL042WP38729 150 aa3.59□□□□□ -1.83
PUP2YGR253C LSM8P47093 109 aaKnown RBP3.59□□□□□ -1.83
PUP2YGR253C YNL198CP40166 100 aa3.57□□□□□ -1.84
PUP2YGR253C SKI6P46948 246 aaPredicted RBP3.57□□□□□ -1.84
PUP2YGR253C YCR050CP25630 102 aa3.55□□□□□ -1.84
PUP2YGR253C RPS29AP41057 56 aaKnown RBP3.53□□□□□ -1.84
PUP2YGR253C PBI2P0CT04 75 aaKnown RBP3.52□□□□□ -1.85
PUP2YGR253C RPS29BP41058 56 aaKnown RBP3.52□□□□□ -1.85
PUP2YGR253C ATP20Q12233 115 aa3.52□□□□□ -1.85
PUP2YGR253C RPP2AP05319 106 aaKnown RBP3.48□□□□□ -1.85
PUP2YGR253C YPR170W-BP0C5R9 85 aa3.47□□□□□ -1.85
PUP2YGR253C RAD6P06104 172 aa3.46□□□□□ -1.86
PUP2YGR253C HHF1P02309 103 aaKnown RBP3.45□□□□□ -1.86
PUP2YGR253C RPA12P32529 125 aaKnown RBP3.45□□□□□ -1.86
PUP2YGR253C YBR016WP38216 128 aa3.45□□□□□ -1.86
PUP2YGR253C YPL080CQ02826 108 aa3.45□□□□□ -1.86
PUP2YGR253C LIP1Q03579 150 aa3.42□□□□□ -1.86
PUP2YGR253C YML054C-AQ3E809 52 aa3.39□□□□□ -1.87
PUP2YGR253C YLR255CO13574 117 aa3.38□□□□□ -1.87
PUP2YGR253C YBL008W-AQ3E821 79 aa3.38□□□□□ -1.87
PUP2YGR253C YGR039WP53225 103 aa3.36□□□□□ -1.87
PUP2YGR253C YCR085WP25650 117 aa3.34□□□□□ -1.87
PUP2YGR253C COX8P04039 78 aa3.33□□□□□ -1.88
PUP2YGR253C YGR146C-AQ8TGT9 53 aa3.33□□□□□ -1.88
PUP2YGR253C YLR285C-AQ3E771 56 aa3.32□□□□□ -1.88
PUP2YGR253C RPS30AP0CX33 63 aaKnown RBP3.3□□□□□ -1.88
PUP2YGR253C RPS30BP0CX34 63 aaKnown RBP3.3□□□□□ -1.88
PUP2YGR253C EMC6Q12431 108 aa3.3□□□□□ -1.88
PUP2YGR253C YIL156W-BQ2V2P4 73 aa3.3□□□□□ -1.88
PUP2YGR253C YOL013W-AP0C272 63 aaPredicted RBP3.29□□□□□ -1.88
PUP2YGR253C YBL044WP38194 122 aa3.28□□□□□ -1.88
PUP2YGR253C YKL065W-AQ2V2P2 73 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 128.4 ms