RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W YIR020CP40575 100 aa4.37□□□□□ -1.71
SKN1YGR143W YFL015CP43578 164 aa4.37□□□□□ -1.71
SKN1YGR143W SPC1P46965 94 aa4.37□□□□□ -1.71
SKN1YGR143W LIP1Q03579 150 aa4.37□□□□□ -1.71
SKN1YGR143W SOM1Q05676 74 aa4.37□□□□□ -1.71
SKN1YGR143W RRT1P38192 103 aa4.36□□□□□ -1.71
SKN1YGR143W YHL037CP38733 133 aa4.36□□□□□ -1.71
SKN1YGR143W YOR034C-AQ3E735 80 aa4.35□□□□□ -1.71
SKN1YGR143W YCR043CP25361 127 aa4.35□□□□□ -1.71
SKN1YGR143W YIL156W-BQ2V2P4 73 aa4.35□□□□□ -1.71
SKN1YGR143W YCL042WP25572 119 aa4.34□□□□□ -1.71
SKN1YGR143W UTP20P35194 2493 aaKnown RBP4.33□□□□□ -1.72
SKN1YGR143W YER084WP40057 128 aa4.33□□□□□ -1.72
SKN1YGR143W YGL258W-AQ3E740 77 aa4.33□□□□□ -1.72
SKN1YGR143W YAR023CD6VPM8 179 aa4.33□□□□□ -1.72
SKN1YGR143W YJR107C-AP0CT86 78 aa4.32□□□□□ -1.72
SKN1YGR143W MRPL38P35996 138 aaPredicted RBP4.32□□□□□ -1.72
SKN1YGR143W ARC15P40518 154 aaRIP-Chip data4.32□□□□□ -1.72not detected
SKN1YGR143W RPL38P49167 78 aaKnown RBP4.32□□□□□ -1.72
SKN1YGR143W YOR008C-AQ3E7B9 74 aa4.32□□□□□ -1.72
SKN1YGR143W YBL008W-AQ3E821 79 aa4.32□□□□□ -1.72
SKN1YGR143W CCW14O13547 238 aa4.31□□□□□ -1.72
SKN1YGR143W SIP18P50263 79 aa4.31□□□□□ -1.72
SKN1YGR143W TMC1Q08422 150 aaPredicted RBP4.31□□□□□ -1.72
SKN1YGR143W URM1P40554 99 aaPredicted RBP4.29□□□□□ -1.72
SKN1YGR143W YMR244WQ04018 355 aa4.29□□□□□ -1.72
SKN1YGR143W YDR010CQ12426 110 aa4.29□□□□□ -1.72
SKN1YGR143W YER175W-AQ8TGU4 54 aa4.29□□□□□ -1.72
SKN1YGR143W Q0297Q9ZZV8 51 aa4.29□□□□□ -1.72
SKN1YGR143W COX23P38824 151 aa4.28□□□□□ -1.72
SKN1YGR143W YCR095W-AQ3E787 52 aa4.28□□□□□ -1.72
SKN1YGR143W YCR022CP25620 114 aa4.27□□□□□ -1.73
SKN1YGR143W YLR342W-AQ3E810 57 aa4.26□□□□□ -1.73
SKN1YGR143W YGL149WP53116 101 aa4.25□□□□□ -1.73
SKN1YGR143W YMR254CQ04838 102 aa4.25□□□□□ -1.73
SKN1YGR143W POR2P40478 281 aa4.24□□□□□ -1.73
SKN1YGR143W YDL241WQ07738 123 aa4.24□□□□□ -1.73
SKN1YGR143W YNL042W-BQ3E7Z2 85 aa4.24□□□□□ -1.73
SKN1YGR143W YLR236CA0A023PZG4 107 aa4.24□□□□□ -1.73
SKN1YGR143W RPS11AP0CX47 156 aaKnown RBP4.24□□□□□ -1.73
SKN1YGR143W RPS11BP0CX48 156 aaKnown RBP4.24□□□□□ -1.73
SKN1YGR143W MRX7P53869 86 aa4.24□□□□□ -1.73
SKN1YGR143W ATP18P81450 59 aa4.24□□□□□ -1.73
SKN1YGR143W MRPS8Q03799 155 aa4.24□□□□□ -1.73
SKN1YGR143W RPL39P04650 51 aa4.22□□□□□ -1.73
SKN1YGR143W SNA2P56508 79 aa4.22□□□□□ -1.73
SKN1YGR143W YDR114CQ04597 100 aa4.21□□□□□ -1.74
SKN1YGR143W URA2P07259 2214 aaKnown RBP4.21□□□□□ -1.74
SKN1YGR143W RTC6O14464 93 aa4.21□□□□□ -1.74
SKN1YGR143W YFR009W-AP0C5M9 85 aa4.21□□□□□ -1.74
SKN1YGR143W YJL197C-AP0C5P0 93 aa4.21□□□□□ -1.74
SKN1YGR143W YIL102CP40488 101 aa4.21□□□□□ -1.74
SKN1YGR143W QCR8P08525 94 aa4.2□□□□□ -1.74
SKN1YGR143W YJR146WP47174 117 aa4.2□□□□□ -1.74
SKN1YGR143W YCL048W-AQ2V2Q2 79 aa4.2□□□□□ -1.74
SKN1YGR143W BSC4P53841 131 aa4.19□□□□□ -1.74
SKN1YGR143W CCW12Q12127 133 aa4.19□□□□□ -1.74
SKN1YGR143W DYN1P36022 4092 aa4.18□□□□□ -1.74
SKN1YGR143W YCR041WP37265 110 aa4.18□□□□□ -1.74
SKN1YGR143W HUB1Q6Q546 73 aa4.18□□□□□ -1.74
SKN1YGR143W YBR219CP38317 127 aa4.18□□□□□ -1.74
SKN1YGR143W YPR013CQ12145 317 aa4.17□□□□□ -1.74
SKN1YGR143W ECM19Q06011 112 aa4.16□□□□□ -1.74
SKN1YGR143W YMR105W-AQ8TGS8 64 aa4.16□□□□□ -1.74
SKN1YGR143W YJL027CP47063 138 aaPredicted RBP4.15□□□□□ -1.74
SKN1YGR143W AQY2P0CD90 149 aa4.15□□□□□ -1.75
SKN1YGR143W IGD1P43598 195 aa4.15□□□□□ -1.75
SKN1YGR143W YPR010C-AA5Z2X5 72 aa4.14□□□□□ -1.75
SKN1YGR143W YLR157W-DP0CE99 70 aa4.13□□□□□ -1.75
SKN1YGR143W YEL008WP40001 126 aa4.13□□□□□ -1.75
SKN1YGR143W YCR001WP25347 104 aa4.13□□□□□ -1.75
SKN1YGR143W YMR001C-AQ8TGS9 76 aa4.12□□□□□ -1.75
SKN1YGR143W ATP17Q06405 101 aa4.12□□□□□ -1.75
SKN1YGR143W LCL2Q08045 131 aa4.1□□□□□ -1.75
SKN1YGR143W YER078W-AQ3E7A2 54 aa4.1□□□□□ -1.75
SKN1YGR143W SDH6Q3E785 79 aa4.1□□□□□ -1.75
SKN1YGR143W MRP10O75012 95 aa4.08□□□□□ -1.76
SKN1YGR143W YLL006W-AQ3E814 58 aa4.08□□□□□ -1.76
SKN1YGR143W YMR122W-AQ3E842 84 aa4.08□□□□□ -1.76
SKN1YGR143W YOL013W-AP0C272 63 aaPredicted RBP4.07□□□□□ -1.76
SKN1YGR143W YBR027CP38220 110 aa4.07□□□□□ -1.76
SKN1YGR143W YNL122CP53921 115 aaPredicted RBP4.06□□□□□ -1.76
SKN1YGR143W YOL085CQ99345 113 aa4.06□□□□□ -1.76
SKN1YGR143W YBR200W-AQ3E755 54 aa4.05□□□□□ -1.76
SKN1YGR143W YGR025WP53216 100 aa4.05□□□□□ -1.76
SKN1YGR143W COX14P39103 70 aa4.04□□□□□ -1.76
SKN1YGR143W YGL014C-AP0C5N1 53 aa4.04□□□□□ -1.76
SKN1YGR143W CMC4Q3E7A9 73 aa4.04□□□□□ -1.76
SKN1YGR143W SGF11Q03067 99 aa4.03□□□□□ -1.76
SKN1YGR143W VAM10Q08474 114 aa4.03□□□□□ -1.76
SKN1YGR143W YHR125WP38831 101 aa4.03□□□□□ -1.77
SKN1YGR143W YHR213W-BQ8TGK1 99 aa4.01□□□□□ -1.77
SKN1YGR143W Q0032Q9ZZX7 96 aa4□□□□□ -1.77
SKN1YGR143W YDR210WQ03482 75 aa3.98□□□□□ -1.77
SKN1YGR143W YJL133C-AQ3E7A3 74 aa3.97□□□□□ -1.77
SKN1YGR143W AUA1P32450 94 aa3.95□□□□□ -1.78
SKN1YGR143W YEL014CP39999 101 aa3.94□□□□□ -1.78
SKN1YGR143W HOR7Q05827 59 aa3.92□□□□□ -1.78
SKN1YGR143W YBL039W-BP0C268 59 aa3.91□□□□□ -1.78
SKN1YGR143W YDL012CQ12489 107 aa3.9□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 174 ms