RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C RPL33BP41056 107 aaKnown RBP3.42□□□□□ -1.86
SEC9YGR009C HUB1Q6Q546 73 aa3.42□□□□□ -1.86
SEC9YGR009C BPH1P25356 2167 aa3.42□□□□□ -1.86
SEC9YGR009C CCW12Q12127 133 aa3.42□□□□□ -1.86
SEC9YGR009C YOL085CQ99345 113 aa3.42□□□□□ -1.86
SEC9YGR009C YBR219CP38317 127 aa3.41□□□□□ -1.86
SEC9YGR009C YJL027CP47063 138 aaPredicted RBP3.41□□□□□ -1.86
SEC9YGR009C YKR032WP36127 104 aa3.4□□□□□ -1.86
SEC9YGR009C CCW14O13547 238 aa3.39□□□□□ -1.87
SEC9YGR009C YLR122CQ12312 125 aa3.39□□□□□ -1.87
SEC9YGR009C YCR001WP25347 104 aa3.38□□□□□ -1.87
SEC9YGR009C SHU1P38751 150 aa3.38□□□□□ -1.87
SEC9YGR009C ATP17Q06405 101 aa3.38□□□□□ -1.87
SEC9YGR009C YGL014C-AP0C5N1 53 aa3.36□□□□□ -1.87
SEC9YGR009C RPL38P49167 78 aaKnown RBP3.35□□□□□ -1.87
SEC9YGR009C LCL2Q08045 131 aa3.35□□□□□ -1.87
SEC9YGR009C GLT1Q12680 2145 aaKnown RBP3.35□□□□□ -1.87
SEC9YGR009C YJR107C-AP0CT86 78 aa3.34□□□□□ -1.87
SEC9YGR009C YNL122CP53921 115 aaPredicted RBP3.34□□□□□ -1.87
SEC9YGR009C MGR2Q02889 113 aa3.34□□□□□ -1.87
SEC9YGR009C FIG2P25653 1609 aa3.34□□□□□ -1.87
SEC9YGR009C HUA1P40325 198 aa3.34□□□□□ -1.88
SEC9YGR009C SGF11Q03067 99 aa3.34□□□□□ -1.88
SEC9YGR009C YDR210WQ03482 75 aa3.34□□□□□ -1.88
SEC9YGR009C YSF3P0C074 85 aaPredicted RBP3.33□□□□□ -1.88
SEC9YGR009C MRPS12P53732 153 aa3.33□□□□□ -1.88
SEC9YGR009C CDC39P25655 2108 aaKnown RBP3.32□□□□□ -1.88
SEC9YGR009C AQY2P0CD90 149 aa3.32□□□□□ -1.88
SEC9YGR009C YIL102CP40488 101 aa3.32□□□□□ -1.88
SEC9YGR009C TOS6P48560 102 aa3.31□□□□□ -1.88
SEC9YGR009C YLR157W-DP0CE99 70 aa3.31□□□□□ -1.88
SEC9YGR009C TOM7P53507 60 aa3.31□□□□□ -1.88
SEC9YGR009C YGL041C-BQ3E750 60 aa3.31□□□□□ -1.88
SEC9YGR009C YMR001C-AQ8TGS9 76 aa3.31□□□□□ -1.88
SEC9YGR009C YMR122W-AQ3E842 84 aa3.3□□□□□ -1.88
SEC9YGR009C RPL33AP05744 107 aaKnown RBP3.29□□□□□ -1.88
SEC9YGR009C SDH6Q3E785 79 aa3.29□□□□□ -1.88
SEC9YGR009C HUG1Q6Q5K6 68 aa3.29□□□□□ -1.88
SEC9YGR009C FAS1P07149 2051 aaKnown RBP3.28□□□□□ -1.88
SEC9YGR009C ATP18P81450 59 aa3.27□□□□□ -1.89
SEC9YGR009C YER084WP40057 128 aa3.25□□□□□ -1.89
SEC9YGR009C YJL144WP47009 104 aa3.25□□□□□ -1.89
SEC9YGR009C YBR201C-AQ2V2Q3 67 aa3.25□□□□□ -1.89
SEC9YGR009C YPR108W-AQ3E7B3 70 aa3.25□□□□□ -1.89
SEC9YGR009C YOR008C-AQ3E7B9 74 aa3.25□□□□□ -1.89
SEC9YGR009C YKR073CP36153 106 aa3.24□□□□□ -1.89
SEC9YGR009C YPR010C-AA5Z2X5 72 aa3.23□□□□□ -1.89
SEC9YGR009C BRR2P32639 2163 aaKnown RBP3.22□□□□□ -1.89
SEC9YGR009C YHR007C-AQ07074 71 aa3.22□□□□□ -1.89
SEC9YGR009C YFR009W-AP0C5M9 85 aa3.21□□□□□ -1.89
SEC9YGR009C VAM10Q08474 114 aa3.21□□□□□ -1.89
SEC9YGR009C YMR141CP40211 102 aa3.21□□□□□ -1.9
SEC9YGR009C YGR240C-AQ3E786 66 aa3.21□□□□□ -1.9
SEC9YGR009C TAR1Q8TGM6 124 aa3.21□□□□□ -1.9
SEC9YGR009C YLR255CO13574 117 aa3.2□□□□□ -1.9
SEC9YGR009C MVB12P42939 101 aa3.2□□□□□ -1.9
SEC9YGR009C YOL097W-AQ3E7Y9 61 aa3.2□□□□□ -1.9
SEC9YGR009C Q0032Q9ZZX7 96 aa3.2□□□□□ -1.9
SEC9YGR009C YOL013W-AP0C272 63 aaPredicted RBP3.19□□□□□ -1.9
SEC9YGR009C YBL039W-BP0C268 59 aa3.18□□□□□ -1.9
SEC9YGR009C FLO1P32768 1537 aa3.16□□□□□ -1.9
SEC9YGR009C YDL012CQ12489 107 aa3.16□□□□□ -1.9
SEC9YGR009C YJR146WP47174 117 aa3.15□□□□□ -1.91
SEC9YGR009C YEL008WP40001 126 aa3.14□□□□□ -1.91
SEC9YGR009C YDR114CQ04597 100 aa3.14□□□□□ -1.91
SEC9YGR009C YGL258W-AQ3E740 77 aa3.13□□□□□ -1.91
SEC9YGR009C YLR342W-AQ3E810 57 aa3.13□□□□□ -1.91
SEC9YGR009C YIL086CP40503 102 aa3.12□□□□□ -1.91
SEC9YGR009C YOR072WQ08486 104 aa3.12□□□□□ -1.91
SEC9YGR009C YBR200W-AQ3E755 54 aa3.11□□□□□ -1.91
SEC9YGR009C YGR025WP53216 100 aa3.11□□□□□ -1.91
SEC9YGR009C ACC1Q00955 2233 aaKnown RBP3.09□□□□□ -1.91
SEC9YGR009C YCL042WP25572 119 aa3.09□□□□□ -1.91
SEC9YGR009C YOR011W-AQ3E807 68 aa3.09□□□□□ -1.91
SEC9YGR009C LCL1Q02786 101 aa3.08□□□□□ -1.92
SEC9YGR009C COX7P10174 60 aa3.07□□□□□ -1.92
SEC9YGR009C AUA1P32450 94 aa3.07□□□□□ -1.92
SEC9YGR009C RDS3Q06835 107 aaPredicted RBP3.06□□□□□ -1.92
SEC9YGR009C YHR213W-BQ8TGK1 99 aa3.06□□□□□ -1.92
SEC9YGR009C BLM10P43583 2143 aa3.05□□□□□ -1.92
SEC9YGR009C YJR128WP47162 119 aa3.05□□□□□ -1.92
SEC9YGR009C YLL006W-AQ3E814 58 aa3.05□□□□□ -1.92
SEC9YGR009C YJL133C-AQ3E7A3 74 aa3.03□□□□□ -1.92
SEC9YGR009C YOR394C-AQ8TGJ0 55 aa3.01□□□□□ -1.93
SEC9YGR009C YJL009WP47078 108 aa3.01□□□□□ -1.93
SEC9YGR009C SIP18P50263 79 aa3.01□□□□□ -1.93
SEC9YGR009C YBR230W-AQ3E762 66 aa2.99□□□□□ -1.93
SEC9YGR009C YAR064WP39563 99 aa2.97□□□□□ -1.93
SEC9YGR009C SEN1Q00416 2231 aaKnown RBP2.95□□□□□ -1.94
SEC9YGR009C GIS2P53849 153 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
SEC9YGR009C RPL43AP0CX25 92 aaKnown RBP2.94□□□□□ -1.94
SEC9YGR009C RPL43BP0CX26 92 aa2.94□□□□□ -1.94
SEC9YGR009C YNL146C-AQ3E7Z1 64 aa2.94□□□□□ -1.94
SEC9YGR009C BEM2P39960 2167 aaKnown RBP2.94□□□□□ -1.94
SEC9YGR009C OLI1P61829 76 aa2.94□□□□□ -1.94
SEC9YGR009C YMR230W-AQ3E7B5 62 aa2.93□□□□□ -1.94
SEC9YGR009C YLR307C-AQ3E825 87 aa2.93□□□□□ -1.94
SEC9YGR009C RPC10P40422 70 aa2.92□□□□□ -1.94
SEC9YGR009C YNL162W-AQ3E7A8 72 aa2.92□□□□□ -1.94
SEC9YGR009C NCE101Q02820 53 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms