RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C MHF2Q3E829 80 aa1.58□□□□□ -2.16
SSN2YDR443C CSF1Q12150 2958 aa1.58□□□□□ -2.16
SSN2YDR443C YBL071CP38185 102 aa1.58□□□□□ -2.16
SSN2YDR443C Q0297Q9ZZV8 51 aa1.58□□□□□ -2.16
SSN2YDR443C TOR1P35169 2470 aa1.57□□□□□ -2.16
SSN2YDR443C PDX3P38075 228 aaKnown RBP1.57□□□□□ -2.16
SSN2YDR443C NCE101Q02820 53 aa1.57□□□□□ -2.16
SSN2YDR443C LCL2Q08045 131 aa1.57□□□□□ -2.16
SSN2YDR443C YOR105WQ08504 108 aa1.57□□□□□ -2.16
SSN2YDR443C YKL065W-AQ2V2P2 73 aa1.57□□□□□ -2.16
SSN2YDR443C YGR035W-AQ45U48 73 aa1.57□□□□□ -2.16
SSN2YDR443C YHR086W-AQ3E746 53 aa1.57□□□□□ -2.16
SSN2YDR443C PAU6P0CE90 120 aa1.57□□□□□ -2.16
SSN2YDR443C PAU18P0CE91 120 aa1.57□□□□□ -2.16
SSN2YDR443C RPS11AP0CX47 156 aaKnown RBP1.56□□□□□ -2.16
SSN2YDR443C RPS11BP0CX48 156 aaKnown RBP1.56□□□□□ -2.16
SSN2YDR443C TIM12P32830 109 aa1.56□□□□□ -2.16
SSN2YDR443C MPC2P38857 129 aa1.56□□□□□ -2.16
SSN2YDR443C TOR2P32600 2474 aaKnown RBP1.56□□□□□ -2.16
SSN2YDR443C MRPL31P14063 131 aaPredicted RBP1.56□□□□□ -2.16
SSN2YDR443C YIL102C-AQ2V2P5 75 aa1.55□□□□□ -2.16
SSN2YDR443C COX19Q3E731 98 aa1.55□□□□□ -2.16
SSN2YDR443C FMP27Q06179 2628 aa1.55□□□□□ -2.16
SSN2YDR443C SPI1P40092 148 aa1.55□□□□□ -2.16
SSN2YDR443C YLR255CO13574 117 aa1.55□□□□□ -2.16
SSN2YDR443C SMX2P40204 77 aaKnown RBP1.55□□□□□ -2.16
SSN2YDR443C SNA2P56508 79 aa1.54□□□□□ -2.16
SSN2YDR443C YIL156W-BQ2V2P4 73 aa1.54□□□□□ -2.16
SSN2YDR443C POL2P21951 2222 aaKnown RBP1.54□□□□□ -2.16
SSN2YDR443C YBR032WP38223 100 aa1.53□□□□□ -2.16
SSN2YDR443C YHR173CP38864 112 aa1.53□□□□□ -2.16
SSN2YDR443C BSC4P53841 131 aa1.53□□□□□ -2.16
SSN2YDR443C PRM7Q12459 698 aa1.53□□□□□ -2.16
SSN2YDR443C QCR9P22289 66 aa1.53□□□□□ -2.16
SSN2YDR443C YKL018C-AQ3E7A7 99 aa1.53□□□□□ -2.16
SSN2YDR443C COA3Q3E7B2 85 aa1.53□□□□□ -2.16
SSN2YDR443C SEN1Q00416 2231 aaKnown RBP1.52□□□□□ -2.17
SSN2YDR443C YNL146C-AQ3E7Z1 64 aa1.52□□□□□ -2.17
SSN2YDR443C AIM19P40502 157 aa1.52□□□□□ -2.17
SSN2YDR443C YGL041C-BQ3E750 60 aa1.52□□□□□ -2.17
SSN2YDR443C PAU8P0CE92 120 aa1.52□□□□□ -2.17
SSN2YDR443C PAU11P0CE93 120 aa1.52□□□□□ -2.17
SSN2YDR443C PAU13P38725 120 aa1.52□□□□□ -2.17
SSN2YDR443C PAU4P53427 120 aa1.52□□□□□ -2.17
SSN2YDR443C PAU10Q03050 120 aa1.52□□□□□ -2.17
SSN2YDR443C PAU9Q3E770 120 aa1.52□□□□□ -2.17
SSN2YDR443C ERI1P62651 68 aaKnown RBP1.52□□□□□ -2.17
SSN2YDR443C NOP10Q6Q547 58 aaPredicted RBP1.52□□□□□ -2.17
SSN2YDR443C YNL122CP53921 115 aaPredicted RBP1.51□□□□□ -2.17
SSN2YDR443C YGR240C-AQ3E786 66 aa1.51□□□□□ -2.17
SSN2YDR443C YDR010CQ12426 110 aa1.51□□□□□ -2.17
SSN2YDR443C YDL022C-AP0C5L6 82 aa1.5□□□□□ -2.17
SSN2YDR443C PAU1P0CE88 120 aa1.5□□□□□ -2.17
SSN2YDR443C PAU14P0CE89 120 aa1.5□□□□□ -2.17
SSN2YDR443C SIP18P50263 79 aa1.5□□□□□ -2.17
SSN2YDR443C YJL009WP47078 108 aa1.49□□□□□ -2.17
SSN2YDR443C HFA1P32874 2273 aa1.48□□□□□ -2.17
SSN2YDR443C YKL023C-AQ2V2P3 75 aa1.48□□□□□ -2.17
SSN2YDR443C FPR2P32472 135 aa1.47□□□□□ -2.17
SSN2YDR443C YSY6P38374 65 aa1.47□□□□□ -2.17
SSN2YDR443C PAU20Q08322 120 aa1.46□□□□□ -2.18
SSN2YDR443C YDL012CQ12489 107 aa1.46□□□□□ -2.18
SSN2YDR443C MGR2Q02889 113 aa1.46□□□□□ -2.18
SSN2YDR443C YHR212W-AP0CX91 67 aa1.46□□□□□ -2.18
SSN2YDR443C LCL1Q02786 101 aa1.46□□□□□ -2.18
SSN2YDR443C YNL042W-BQ3E7Z2 85 aa1.45□□□□□ -2.18
SSN2YDR443C YMR122W-AQ3E842 84 aa1.45□□□□□ -2.18
SSN2YDR443C PRP8P33334 2413 aaKnown RBP1.45□□□□□ -2.18
SSN2YDR443C AQY2P0CD90 149 aa1.45□□□□□ -2.18
SSN2YDR443C COX9P07255 59 aa1.44□□□□□ -2.18
SSN2YDR443C GCN1P33892 2672 aaKnown RBP1.44□□□□□ -2.18
SSN2YDR443C MDN1Q12019 4910 aaKnown RBP1.44□□□□□ -2.18
SSN2YDR443C YDR182W-AQ3E796 67 aa1.43□□□□□ -2.18
SSN2YDR443C SEC16P48415 2195 aaKnown RBP1.42□□□□□ -2.18
SSN2YDR443C PAU7P39545 55 aa1.41□□□□□ -2.18
SSN2YDR443C SHU1P38751 150 aa1.41□□□□□ -2.18
SSN2YDR443C YAR064WP39563 99 aa1.41□□□□□ -2.18
SSN2YDR443C YOL166W-AQ8TGJ1 51 aa1.41□□□□□ -2.18
SSN2YDR443C BLM10P43583 2143 aa1.4□□□□□ -2.18
SSN2YDR443C YMR105W-AQ8TGS8 64 aa1.4□□□□□ -2.18
SSN2YDR443C ATP17Q06405 101 aa1.4□□□□□ -2.19
SSN2YDR443C YCR001WP25347 104 aa1.4□□□□□ -2.19
SSN2YDR443C GIS2P53849 153 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
SSN2YDR443C YOR072WQ08486 104 aa1.4□□□□□ -2.19
SSN2YDR443C RPL39P04650 51 aa1.39□□□□□ -2.19
SSN2YDR443C EDC1P53080 175 aaPredicted RBP1.39□□□□□ -2.19
SSN2YDR443C HOR7Q05827 59 aa1.39□□□□□ -2.19
SSN2YDR443C YBR201C-AQ2V2Q3 67 aa1.38□□□□□ -2.19
SSN2YDR443C YMR007WQ03675 126 aa1.38□□□□□ -2.19
SSN2YDR443C YOR034C-AQ3E735 80 aa1.37□□□□□ -2.19
SSN2YDR443C HUG1Q6Q5K6 68 aa1.37□□□□□ -2.19
SSN2YDR443C YOL013W-AP0C272 63 aaPredicted RBP1.37□□□□□ -2.19
SSN2YDR443C AUA1P32450 94 aa1.37□□□□□ -2.19
SSN2YDR443C RPS30AP0CX33 63 aaKnown RBP1.37□□□□□ -2.19
SSN2YDR443C RPS30BP0CX34 63 aaKnown RBP1.37□□□□□ -2.19
SSN2YDR443C Q0032Q9ZZX7 96 aa1.36□□□□□ -2.19
SSN2YDR443C BPH1P25356 2167 aa1.36□□□□□ -2.19
SSN2YDR443C YJR128WP47162 119 aa1.36□□□□□ -2.19
SSN2YDR443C YNL190WP53872 204 aa1.35□□□□□ -2.19
SSN2YDR443C MEC1P38111 2368 aa1.35□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms