RNA–Protein interactions for RNA: YDR420W

HKR1, Transcript of Mucin family member that functions as an osmosensor in the HOG pathway, yeastyeast

Gene HKR1, Length 5,409 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HKR1YDR420W PRP8P33334 2413 aaKnown RBP1.05□□□□□ -2.24
HKR1YDR420W AGA2P32781 87 aa1.05□□□□□ -2.24
HKR1YDR420W YFL051CP43552 160 aa1.05□□□□□ -2.24
HKR1YDR420W LCL1Q02786 101 aa1.05□□□□□ -2.24
HKR1YDR420W YLR307C-AQ3E825 87 aa1.05□□□□□ -2.24
HKR1YDR420W STT4P37297 1900 aa1.05□□□□□ -2.24
HKR1YDR420W PET8P38921 284 aa1.05□□□□□ -2.24
HKR1YDR420W YJL009WP47078 108 aa1.05□□□□□ -2.24
HKR1YDR420W SRL1Q08673 210 aa1.05□□□□□ -2.24
HKR1YDR420W YLR342W-AQ3E810 57 aa1.05□□□□□ -2.24
HKR1YDR420W SED1Q01589 338 aa1.04□□□□□ -2.24
HKR1YDR420W MIG3P39943 394 aa1.04□□□□□ -2.24
HKR1YDR420W RPL42AP0CX27 106 aaKnown RBP1.04□□□□□ -2.24
HKR1YDR420W RPL42BP0CX28 106 aaKnown RBP1.04□□□□□ -2.24
HKR1YDR420W BRR2P32639 2163 aaKnown RBP1.04□□□□□ -2.24
HKR1YDR420W ATP15P21306 62 aa1.04□□□□□ -2.24
HKR1YDR420W ERI1P62651 68 aaKnown RBP1.04□□□□□ -2.24
HKR1YDR420W SDH6Q3E785 79 aa1.04□□□□□ -2.24
HKR1YDR420W YJL027CP47063 138 aaPredicted RBP1.03□□□□□ -2.24
HKR1YDR420W EDC1P53080 175 aaPredicted RBP1.03□□□□□ -2.24
HKR1YDR420W MRP10O75012 95 aa1.03□□□□□ -2.24
HKR1YDR420W YJR107C-AP0CT86 78 aa1.03□□□□□ -2.24
HKR1YDR420W YHR050W-AQ05451 56 aa1.03□□□□□ -2.24
HKR1YDR420W YBR027CP38220 110 aa1.03□□□□□ -2.24
HKR1YDR420W YEL067CP39978 195 aa1.03□□□□□ -2.24
HKR1YDR420W YGR025WP53216 100 aa1.03□□□□□ -2.24
HKR1YDR420W UBR1P19812 1950 aa1.03□□□□□ -2.24
HKR1YDR420W COX23P38824 151 aa1.03□□□□□ -2.25
HKR1YDR420W YBR230W-AQ3E762 66 aa1.03□□□□□ -2.25
HKR1YDR420W CYR1P08678 2026 aaKnown RBP1.03□□□□□ -2.25
HKR1YDR420W YLR157W-DP0CE99 70 aa1.02□□□□□ -2.25
HKR1YDR420W ATP18P81450 59 aa1.02□□□□□ -2.25
HKR1YDR420W RTC6O14464 93 aa1.02□□□□□ -2.25
HKR1YDR420W CDC39P25655 2108 aaKnown RBP1.02□□□□□ -2.25
HKR1YDR420W SGF11Q03067 99 aa1.02□□□□□ -2.25
HKR1YDR420W YMR122CQ03879 124 aa1.02□□□□□ -2.25
HKR1YDR420W DSE2P38844 325 aa1.02□□□□□ -2.25
HKR1YDR420W GCN1P33892 2672 aaKnown RBP1.02□□□□□ -2.25
HKR1YDR420W AQY2P0CD90 149 aa1.02□□□□□ -2.25
HKR1YDR420W RPS27AP35997 82 aaKnown RBP1.02□□□□□ -2.25
HKR1YDR420W YBR219CP38317 127 aa1.02□□□□□ -2.25
HKR1YDR420W RPS27BP38711 82 aa1.02□□□□□ -2.25
HKR1YDR420W YIL163CP40448 117 aa1.02□□□□□ -2.25
HKR1YDR420W OLI1P61829 76 aa1.02□□□□□ -2.25
HKR1YDR420W YDR246W-AQ3E763 66 aa1.02□□□□□ -2.25
HKR1YDR420W YOR011W-AQ3E807 68 aa1.02□□□□□ -2.25
HKR1YDR420W YCR022CP25620 114 aa1.02□□□□□ -2.25
HKR1YDR420W YLR236CA0A023PZG4 107 aa1.01□□□□□ -2.25
HKR1YDR420W YBL081WP38180 368 aaKnown RBP1.01□□□□□ -2.25
HKR1YDR420W YEL014CP39999 101 aa1.01□□□□□ -2.25
HKR1YDR420W YPR053CQ6Q5F3 151 aa1.01□□□□□ -2.25
HKR1YDR420W YSF3P0C074 85 aaPredicted RBP1.01□□□□□ -2.25
HKR1YDR420W YLR285C-AQ3E771 56 aa1.01□□□□□ -2.25
HKR1YDR420W YOR008C-AQ3E7B9 74 aa1.01□□□□□ -2.25
HKR1YDR420W YOR032W-AQ8TGS1 66 aa1.01□□□□□ -2.25
HKR1YDR420W HFA1P32874 2273 aa1.01□□□□□ -2.25
HKR1YDR420W YER145C-AA0A023PYF4 145 aa1.01□□□□□ -2.25
HKR1YDR420W YKL018C-AQ3E7A7 99 aa1.01□□□□□ -2.25
HKR1YDR420W YPR108W-AQ3E7B3 70 aa1.01□□□□□ -2.25
HKR1YDR420W CCW12Q12127 133 aa1.01□□□□□ -2.25
HKR1YDR420W COX8P04039 78 aa1□□□□□ -2.25
HKR1YDR420W KRE9P39005 276 aa1□□□□□ -2.25
HKR1YDR420W YIR020CP40575 100 aa1□□□□□ -2.25
HKR1YDR420W YNL122CP53921 115 aaPredicted RBP1□□□□□ -2.25
HKR1YDR420W RPS11AP0CX47 156 aaKnown RBP1□□□□□ -2.25
HKR1YDR420W RPS11BP0CX48 156 aaKnown RBP1□□□□□ -2.25
HKR1YDR420W YOL166W-AQ8TGJ1 51 aa1□□□□□ -2.25
HKR1YDR420W UTP20P35194 2493 aaKnown RBP1□□□□□ -2.25
HKR1YDR420W RPL29P05747 59 aaPredicted RBP1□□□□□ -2.25
HKR1YDR420W YIL086CP40503 102 aa1□□□□□ -2.25
HKR1YDR420W YBL071CP38185 102 aa0.99□□□□□ -2.25
HKR1YDR420W RPL33AP05744 107 aaKnown RBP0.99□□□□□ -2.25
HKR1YDR420W YOR376W-AQ3E805 51 aa0.99□□□□□ -2.25
HKR1YDR420W RPR2P40571 144 aa0.99□□□□□ -2.25
HKR1YDR420W ECM19Q06011 112 aa0.99□□□□□ -2.25
HKR1YDR420W RPS30AP0CX33 63 aaKnown RBP0.98□□□□□ -2.25
HKR1YDR420W RPS30BP0CX34 63 aaKnown RBP0.98□□□□□ -2.25
HKR1YDR420W YNR077CP53758 84 aa0.98□□□□□ -2.25
HKR1YDR420W GIS2P53849 153 aaKnown RBP RIP-Chip data0.98□□□□□ -2.25not detected
HKR1YDR420W HOR7Q05827 59 aa0.98□□□□□ -2.25
HKR1YDR420W LCL2Q08045 131 aa0.98□□□□□ -2.25
HKR1YDR420W YMR001C-AQ8TGS9 76 aa0.98□□□□□ -2.25
HKR1YDR420W GLT1Q12680 2145 aaKnown RBP0.98□□□□□ -2.25
HKR1YDR420W SLH1P53327 1967 aaKnown RBP0.98□□□□□ -2.25
HKR1YDR420W YHR032W-AP0C5N6 59 aa0.98□□□□□ -2.25
HKR1YDR420W YEL008WP40001 126 aa0.98□□□□□ -2.25
HKR1YDR420W YJL144WP47009 104 aa0.98□□□□□ -2.25
HKR1YDR420W YDR010CQ12426 110 aa0.98□□□□□ -2.25
HKR1YDR420W DAD4P69851 72 aa0.98□□□□□ -2.25
HKR1YDR420W YGL014C-AP0C5N1 53 aa0.98□□□□□ -2.25
HKR1YDR420W BLM10P43583 2143 aa0.98□□□□□ -2.25
HKR1YDR420W NOP10Q6Q547 58 aaPredicted RBP0.98□□□□□ -2.25
HKR1YDR420W MRPS12P53732 153 aa0.97□□□□□ -2.25
HKR1YDR420W YNL190WP53872 204 aa0.97□□□□□ -2.25
HKR1YDR420W DDR2P89113 61 aa0.97□□□□□ -2.25
HKR1YDR420W YNL042W-BQ3E7Z2 85 aa0.97□□□□□ -2.25
HKR1YDR420W RRT15Q3E811 62 aa0.97□□□□□ -2.25
HKR1YDR420W YMR122W-AQ3E842 84 aa0.97□□□□□ -2.25
HKR1YDR420W FAS1P07149 2051 aaKnown RBP0.97□□□□□ -2.25
HKR1YDR420W SEC16P48415 2195 aaKnown RBP0.97□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms