RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W SPI1P40092 148 aa3.68□□□□□ -1.82
VMS1YDR049W YIL156W-BQ2V2P4 73 aa3.68□□□□□ -1.82
VMS1YDR049W YGL041C-BQ3E750 60 aa3.68□□□□□ -1.82
VMS1YDR049W YDR210WQ03482 75 aa3.67□□□□□ -1.82
VMS1YDR049W YGR035W-AQ45U48 73 aa3.67□□□□□ -1.82
VMS1YDR049W PAU1P0CE88 120 aa3.67□□□□□ -1.82
VMS1YDR049W PAU14P0CE89 120 aa3.67□□□□□ -1.82
VMS1YDR049W ERI1P62651 68 aaKnown RBP3.67□□□□□ -1.82
VMS1YDR049W AIM19P40502 157 aa3.66□□□□□ -1.82
VMS1YDR049W MRPS12P53732 153 aa3.66□□□□□ -1.82
VMS1YDR049W PRM7Q12459 698 aa3.65□□□□□ -1.82
VMS1YDR049W NOP10Q6Q547 58 aaPredicted RBP3.65□□□□□ -1.82
VMS1YDR049W PAU20Q08322 120 aa3.64□□□□□ -1.83
VMS1YDR049W YDR246W-AQ3E763 66 aa3.64□□□□□ -1.83
VMS1YDR049W YKL023C-AQ2V2P3 75 aa3.63□□□□□ -1.83
VMS1YDR049W RPS11AP0CX47 156 aaKnown RBP3.62□□□□□ -1.83
VMS1YDR049W RPS11BP0CX48 156 aaKnown RBP3.62□□□□□ -1.83
VMS1YDR049W YDR524C-BQ3E6R4 66 aa3.62□□□□□ -1.83
VMS1YDR049W YBR219CP38317 127 aa3.61□□□□□ -1.83
VMS1YDR049W VPS13Q07878 3144 aa3.6□□□□□ -1.83
VMS1YDR049W YGR240C-AQ3E786 66 aa3.6□□□□□ -1.83
VMS1YDR049W COA3Q3E7B2 85 aa3.6□□□□□ -1.83
VMS1YDR049W PAU7P39545 55 aa3.58□□□□□ -1.84
VMS1YDR049W COA2Q3E823 68 aa3.58□□□□□ -1.84
VMS1YDR049W CYR1P08678 2026 aaKnown RBP3.58□□□□□ -1.84
VMS1YDR049W YCL042WP25572 119 aa3.56□□□□□ -1.84
VMS1YDR049W YDL022C-AP0C5L6 82 aa3.56□□□□□ -1.84
VMS1YDR049W YNL146C-AQ3E7Z1 64 aa3.53□□□□□ -1.84
VMS1YDR049W YOR032W-AQ8TGS1 66 aa3.52□□□□□ -1.85
VMS1YDR049W YLR255CO13574 117 aa3.52□□□□□ -1.85
VMS1YDR049W YNL042W-BQ3E7Z2 85 aa3.52□□□□□ -1.85
VMS1YDR049W YPR108W-AQ3E7B3 70 aa3.51□□□□□ -1.85
VMS1YDR049W YMR007WQ03675 126 aa3.5□□□□□ -1.85
VMS1YDR049W HUG1Q6Q5K6 68 aa3.5□□□□□ -1.85
VMS1YDR049W NCE101Q02820 53 aa3.5□□□□□ -1.85
VMS1YDR049W AQY2P0CD90 149 aa3.49□□□□□ -1.85
VMS1YDR049W TAO3P40468 2376 aa3.48□□□□□ -1.85
VMS1YDR049W YJL009WP47078 108 aa3.47□□□□□ -1.85
VMS1YDR049W YDR182W-AQ3E796 67 aa3.47□□□□□ -1.85
VMS1YDR049W YMR122W-AQ3E842 84 aa3.47□□□□□ -1.85
VMS1YDR049W YOR034C-AQ3E735 80 aa3.46□□□□□ -1.86
VMS1YDR049W BPH1P25356 2167 aa3.46□□□□□ -1.86
VMS1YDR049W ACC1Q00955 2233 aaKnown RBP3.45□□□□□ -1.86
VMS1YDR049W YDR034W-BQ6Q5X2 51 aa3.45□□□□□ -1.86
VMS1YDR049W MGR2Q02889 113 aa3.44□□□□□ -1.86
VMS1YDR049W RPS30AP0CX33 63 aaKnown RBP3.43□□□□□ -1.86
VMS1YDR049W RPS30BP0CX34 63 aaKnown RBP3.43□□□□□ -1.86
VMS1YDR049W YIL086CP40503 102 aa3.43□□□□□ -1.86
VMS1YDR049W EDC1P53080 175 aaPredicted RBP3.43□□□□□ -1.86
VMS1YDR049W YNL190WP53872 204 aa3.43□□□□□ -1.86
VMS1YDR049W BRR2P32639 2163 aaKnown RBP3.43□□□□□ -1.86
VMS1YDR049W YNL122CP53921 115 aaPredicted RBP3.43□□□□□ -1.86
VMS1YDR049W LCL1Q02786 101 aa3.43□□□□□ -1.86
VMS1YDR049W SGF11Q03067 99 aa3.43□□□□□ -1.86
VMS1YDR049W ATP17Q06405 101 aa3.43□□□□□ -1.86
VMS1YDR049W YHR086W-AQ3E746 53 aa3.43□□□□□ -1.86
VMS1YDR049W YBR201C-AQ2V2Q3 67 aa3.42□□□□□ -1.86
VMS1YDR049W SHU1P38751 150 aa3.41□□□□□ -1.86
VMS1YDR049W YOR192C-CQ3E736 78 aa3.41□□□□□ -1.86
VMS1YDR049W YGL258W-AQ3E740 77 aa3.41□□□□□ -1.86
VMS1YDR049W YCR001WP25347 104 aa3.4□□□□□ -1.87
VMS1YDR049W HUB1Q6Q546 73 aa3.39□□□□□ -1.87
VMS1YDR049W Q0032Q9ZZX7 96 aa3.39□□□□□ -1.87
VMS1YDR049W RPS27AP35997 82 aaKnown RBP3.38□□□□□ -1.87
VMS1YDR049W RPS27BP38711 82 aa3.38□□□□□ -1.87
VMS1YDR049W TOM7P53507 60 aa3.37□□□□□ -1.87
VMS1YDR049W YOL166W-AQ8TGJ1 51 aa3.37□□□□□ -1.87
VMS1YDR049W MVB12P42939 101 aa3.36□□□□□ -1.87
VMS1YDR049W ATP18P81450 59 aa3.36□□□□□ -1.87
VMS1YDR049W FAB1P34756 2278 aa3.36□□□□□ -1.87
VMS1YDR049W YPR117WQ06116 2489 aa3.34□□□□□ -1.87
VMS1YDR049W BEM2P39960 2167 aaKnown RBP3.34□□□□□ -1.87
VMS1YDR049W HUA1P40325 198 aa3.34□□□□□ -1.87
VMS1YDR049W BLM10P43583 2143 aa3.33□□□□□ -1.88
VMS1YDR049W YOL097W-AQ3E7Y9 61 aa3.33□□□□□ -1.88
VMS1YDR049W YOR072WQ08486 104 aa3.31□□□□□ -1.88
VMS1YDR049W YDL012CQ12489 107 aa3.31□□□□□ -1.88
VMS1YDR049W SDH6Q3E785 79 aa3.31□□□□□ -1.88
VMS1YDR049W YHR212W-AP0CX91 67 aa3.3□□□□□ -1.88
VMS1YDR049W YMR141CP40211 102 aa3.3□□□□□ -1.88
VMS1YDR049W TOS6P48560 102 aa3.3□□□□□ -1.88
VMS1YDR049W YLR342W-AQ3E810 57 aa3.3□□□□□ -1.88
VMS1YDR049W SEC16P48415 2195 aaKnown RBP3.29□□□□□ -1.88
VMS1YDR049W POL2P21951 2222 aaKnown RBP3.29□□□□□ -1.88
VMS1YDR049W COX7P10174 60 aa3.27□□□□□ -1.89
VMS1YDR049W YOL013W-AP0C272 63 aaPredicted RBP3.26□□□□□ -1.89
VMS1YDR049W YAR064WP39563 99 aa3.26□□□□□ -1.89
VMS1YDR049W YJR128WP47162 119 aa3.25□□□□□ -1.89
VMS1YDR049W YOR008C-AQ3E7B9 74 aa3.25□□□□□ -1.89
VMS1YDR049W YIL046W-AQ3E7Z4 54 aa3.24□□□□□ -1.89
VMS1YDR049W SIP18P50263 79 aa3.22□□□□□ -1.89
VMS1YDR049W YJR107C-AP0CT86 78 aa3.21□□□□□ -1.9
VMS1YDR049W FMP27Q06179 2628 aa3.2□□□□□ -1.9
VMS1YDR049W YMR001C-AQ8TGS9 76 aa3.2□□□□□ -1.9
VMS1YDR049W SEN1Q00416 2231 aaKnown RBP3.19□□□□□ -1.9
VMS1YDR049W YMR105W-AQ8TGS8 64 aa3.18□□□□□ -1.9
VMS1YDR049W HFA1P32874 2273 aa3.18□□□□□ -1.9
VMS1YDR049W YLR157W-DP0CE99 70 aa3.18□□□□□ -1.9
VMS1YDR049W RPL39P04650 51 aa3.17□□□□□ -1.9
VMS1YDR049W YBL039W-BP0C268 59 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms