RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C YDR274CP87283 123 aa3.3□□□□□ -1.88
CDC48YDL126C TOM7P53507 60 aa3.29□□□□□ -1.88
CDC48YDL126C YJL027CP47063 138 aaPredicted RBP3.29□□□□□ -1.88
CDC48YDL126C YOR381W-AQ3E804 55 aa3.29□□□□□ -1.88
CDC48YDL126C IRC21Q04772 201 aa3.28□□□□□ -1.88
CDC48YDL126C YOR008C-AQ3E7B9 74 aa3.28□□□□□ -1.88
CDC48YDL126C SHU1P38751 150 aa3.27□□□□□ -1.89
CDC48YDL126C HUA1P40325 198 aa3.27□□□□□ -1.89
CDC48YDL126C MRPS12P53732 153 aa3.27□□□□□ -1.89
CDC48YDL126C POR2P40478 281 aa3.27□□□□□ -1.89
CDC48YDL126C YGR035W-AQ45U48 73 aa3.27□□□□□ -1.89
CDC48YDL126C YAL067W-AQ8TGK6 75 aa3.27□□□□□ -1.89
CDC48YDL126C OST5Q92316 86 aa3.27□□□□□ -1.89
CDC48YDL126C YLR236CA0A023PZG4 107 aa3.26□□□□□ -1.89
CDC48YDL126C YER188C-AP0C0V2 99 aa3.26□□□□□ -1.89
CDC48YDL126C HMRA2P0CY13 119 aa3.26□□□□□ -1.89
CDC48YDL126C YKR032WP36127 104 aa3.26□□□□□ -1.89
CDC48YDL126C DAD4P69851 72 aa3.26□□□□□ -1.89
CDC48YDL126C YDL241WQ07738 123 aa3.26□□□□□ -1.89
CDC48YDL126C YLR285C-AQ3E771 56 aa3.26□□□□□ -1.89
CDC48YDL126C HUB1Q6Q546 73 aa3.26□□□□□ -1.89
CDC48YDL126C FYV5P25585 152 aa3.25□□□□□ -1.89
CDC48YDL126C ERI1P62651 68 aaKnown RBP3.25□□□□□ -1.89
CDC48YDL126C YMR141CP40211 102 aa3.24□□□□□ -1.89
CDC48YDL126C RPL26BP53221 127 aaKnown RBP3.24□□□□□ -1.89
CDC48YDL126C YDR115WQ04598 105 aa3.24□□□□□ -1.89
CDC48YDL126C HOR7Q05827 59 aa3.24□□□□□ -1.89
CDC48YDL126C BPH1P25356 2167 aa3.24□□□□□ -1.89
CDC48YDL126C TEL1P38110 2787 aa3.23□□□□□ -1.89
CDC48YDL126C YFL067WP43537 175 aa3.23□□□□□ -1.89
CDC48YDL126C RGM1Q00453 211 aa3.23□□□□□ -1.89
CDC48YDL126C YHR125WP38831 101 aa3.22□□□□□ -1.89
CDC48YDL126C ARC15P40518 154 aaRIP-Chip data3.22□□□□□ -1.89not detected
CDC48YDL126C ATP18P81450 59 aa3.22□□□□□ -1.89
CDC48YDL126C YJR107C-AP0CT86 78 aa3.22□□□□□ -1.89
CDC48YDL126C MRPS8Q03799 155 aa3.22□□□□□ -1.89
CDC48YDL126C YMR122CQ03879 124 aa3.22□□□□□ -1.89
CDC48YDL126C YOL166W-AQ8TGJ1 51 aa3.22□□□□□ -1.89
CDC48YDL126C QCR10P37299 77 aa3.21□□□□□ -1.9
CDC48YDL126C YPR013CQ12145 317 aa3.21□□□□□ -1.9
CDC48YDL126C TRA1P38811 3744 aa3.21□□□□□ -1.9
CDC48YDL126C TOR1P35169 2470 aa3.21□□□□□ -1.9
CDC48YDL126C PRP8P33334 2413 aaKnown RBP3.2□□□□□ -1.9
CDC48YDL126C YCL042WP25572 119 aa3.2□□□□□ -1.9
CDC48YDL126C YGR025WP53216 100 aa3.2□□□□□ -1.9
CDC48YDL126C LIP1Q03579 150 aa3.2□□□□□ -1.9
CDC48YDL126C YJL197C-AP0C5P0 93 aa3.19□□□□□ -1.9
CDC48YDL126C YJR146WP47174 117 aa3.19□□□□□ -1.9
CDC48YDL126C YGL149WP53116 101 aa3.19□□□□□ -1.9
CDC48YDL126C YNL146C-AQ3E7Z1 64 aa3.19□□□□□ -1.9
CDC48YDL126C YOR011W-AQ3E807 68 aa3.19□□□□□ -1.9
CDC48YDL126C YHR032W-AP0C5N6 59 aa3.19□□□□□ -1.9
CDC48YDL126C MEC1P38111 2368 aa3.19□□□□□ -1.9
CDC48YDL126C CCW12Q12127 133 aa3.18□□□□□ -1.9
CDC48YDL126C SOM1Q05676 74 aa3.18□□□□□ -1.9
CDC48YDL126C YCR001WP25347 104 aa3.17□□□□□ -1.9
CDC48YDL126C NOP10Q6Q547 58 aaPredicted RBP3.17□□□□□ -1.9
CDC48YDL126C IGD1P43598 195 aa3.16□□□□□ -1.9
CDC48YDL126C YPR153WQ06537 140 aa3.16□□□□□ -1.9
CDC48YDL126C TAR1Q8TGM6 124 aa3.16□□□□□ -1.9
CDC48YDL126C YBR200W-AQ3E755 54 aa3.15□□□□□ -1.91
CDC48YDL126C RPS30AP0CX33 63 aaKnown RBP3.14□□□□□ -1.91
CDC48YDL126C RPS30BP0CX34 63 aaKnown RBP3.14□□□□□ -1.91
CDC48YDL126C ATP17Q06405 101 aa3.14□□□□□ -1.91
CDC48YDL126C YLR307C-AQ3E825 87 aa3.14□□□□□ -1.91
CDC48YDL126C URA2P07259 2214 aaKnown RBP3.14□□□□□ -1.91
CDC48YDL126C RPL29P05747 59 aaPredicted RBP3.14□□□□□ -1.91
CDC48YDL126C YHR212W-AP0CX91 67 aa3.14□□□□□ -1.91
CDC48YDL126C MRX7P53869 86 aa3.13□□□□□ -1.91
CDC48YDL126C RTC6O14464 93 aa3.13□□□□□ -1.91
CDC48YDL126C COX23P38824 151 aa3.13□□□□□ -1.91
CDC48YDL126C RPS11AP0CX47 156 aaKnown RBP3.12□□□□□ -1.91
CDC48YDL126C RPS11BP0CX48 156 aaKnown RBP3.12□□□□□ -1.91
CDC48YDL126C SPC1P46965 94 aa3.11□□□□□ -1.91
CDC48YDL126C CMC4Q3E7A9 73 aa3.11□□□□□ -1.91
CDC48YDL126C BSC4P53841 131 aa3.11□□□□□ -1.91
CDC48YDL126C YCR095W-AQ3E787 52 aa3.11□□□□□ -1.91
CDC48YDL126C YNL190WP53872 204 aa3.1□□□□□ -1.91
CDC48YDL126C SNA2P56508 79 aa3.1□□□□□ -1.91
CDC48YDL126C SDH6Q3E785 79 aa3.1□□□□□ -1.91
CDC48YDL126C YFR009W-AP0C5M9 85 aa3.09□□□□□ -1.91
CDC48YDL126C EDC1P53080 175 aaPredicted RBP3.09□□□□□ -1.92
CDC48YDL126C YBR219CP38317 127 aa3.07□□□□□ -1.92
CDC48YDL126C PMP3P87284 55 aa3.07□□□□□ -1.92
CDC48YDL126C YLL006W-AQ3E814 58 aa3.07□□□□□ -1.92
CDC48YDL126C YPR010C-AA5Z2X5 72 aa3.06□□□□□ -1.92
CDC48YDL126C YEL008WP40001 126 aa3.06□□□□□ -1.92
CDC48YDL126C YOL097W-AQ3E7Y9 61 aa3.05□□□□□ -1.92
CDC48YDL126C YMR001C-AQ8TGS9 76 aa3.05□□□□□ -1.92
CDC48YDL126C YOL013W-AP0C272 63 aaPredicted RBP3.04□□□□□ -1.92
CDC48YDL126C YIL156W-BQ2V2P4 73 aa3.04□□□□□ -1.92
CDC48YDL126C YNL042W-BQ3E7Z2 85 aa3.04□□□□□ -1.92
CDC48YDL126C YGR240C-AQ3E786 66 aa3.04□□□□□ -1.92
CDC48YDL126C RPL38P49167 78 aaKnown RBP3.02□□□□□ -1.93
CDC48YDL126C YLR157W-DP0CE99 70 aa3.02□□□□□ -1.93
CDC48YDL126C YBR027CP38220 110 aa3.02□□□□□ -1.93
CDC48YDL126C SGF11Q03067 99 aa3.01□□□□□ -1.93
CDC48YDL126C YPR195CQ06594 109 aa3.01□□□□□ -1.93
CDC48YDL126C VAM10Q08474 114 aa3.01□□□□□ -1.93
CDC48YDL126C YDR010CQ12426 110 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 87.9 ms