RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W SFT1P43682 97 aa3.46□□□□□ -1.86
CDC28YBR160W RPL26BP53221 127 aaKnown RBP3.46□□□□□ -1.86
CDC28YBR160W YGR164WP53291 111 aa3.46□□□□□ -1.86
CDC28YBR160W YOR314WQ12506 109 aa3.46□□□□□ -1.86
CDC28YBR160W YLR412C-AQ3E742 68 aa3.46□□□□□ -1.86
CDC28YBR160W URA2P07259 2214 aaKnown RBP3.46□□□□□ -1.86
CDC28YBR160W YBR056W-AI2HB52 66 aa3.45□□□□□ -1.86
CDC28YBR160W YBL039W-BP0C268 59 aa3.45□□□□□ -1.86
CDC28YBR160W BET1P22804 142 aa3.45□□□□□ -1.86
CDC28YBR160W RPB9P27999 122 aa3.45□□□□□ -1.86
CDC28YBR160W YDR274CP87283 123 aa3.45□□□□□ -1.86
CDC28YBR160W YDR182W-AQ3E796 67 aa3.45□□□□□ -1.86
CDC28YBR160W FYV5P25585 152 aa3.44□□□□□ -1.86
CDC28YBR160W RPL38P49167 78 aaKnown RBP3.44□□□□□ -1.86
CDC28YBR160W GCN1P33892 2672 aaKnown RBP3.43□□□□□ -1.86
CDC28YBR160W AQY2P0CD90 149 aa3.43□□□□□ -1.86
CDC28YBR160W COX23P38824 151 aa3.43□□□□□ -1.86
CDC28YBR160W SMD1Q02260 146 aaPredicted RBP3.43□□□□□ -1.86
CDC28YBR160W YBR230W-AQ3E762 66 aa3.43□□□□□ -1.86
CDC28YBR160W KSH1Q8TGJ3 72 aa3.43□□□□□ -1.86
CDC28YBR160W RPL36BO14455 100 aaKnown RBP3.42□□□□□ -1.86
CDC28YBR160W RPL33AP05744 107 aaKnown RBP3.42□□□□□ -1.86
CDC28YBR160W RPL36AP05745 100 aaPredicted RBP3.42□□□□□ -1.86
CDC28YBR160W YCR001WP25347 104 aa3.42□□□□□ -1.86
CDC28YBR160W RPL33BP41056 107 aaKnown RBP3.42□□□□□ -1.86
CDC28YBR160W ICS3P47034 131 aa3.42□□□□□ -1.86
CDC28YBR160W YMR320WQ04897 101 aa3.42□□□□□ -1.86
CDC28YBR160W YLR307C-AQ3E825 87 aa3.42□□□□□ -1.86
CDC28YBR160W TDA8Q6B2U8 126 aa3.42□□□□□ -1.86
CDC28YBR160W NOP10Q6Q547 58 aaPredicted RBP3.42□□□□□ -1.86
CDC28YBR160W TOR2P32600 2474 aaKnown RBP3.42□□□□□ -1.86
CDC28YBR160W TRA1P38811 3744 aa3.41□□□□□ -1.86
CDC28YBR160W YBL081WP38180 368 aaKnown RBP3.4□□□□□ -1.87
CDC28YBR160W EDC2P40023 145 aaPredicted RBP3.4□□□□□ -1.87
CDC28YBR160W YJL127C-BQ3E828 52 aa3.4□□□□□ -1.87
CDC28YBR160W YOL166W-AQ8TGJ1 51 aa3.4□□□□□ -1.87
CDC28YBR160W YAL064WP39711 94 aa3.39□□□□□ -1.87
CDC28YBR160W IGD1P43598 195 aa3.39□□□□□ -1.87
CDC28YBR160W YOL014WQ08110 124 aa3.39□□□□□ -1.87
CDC28YBR160W YNL042W-BQ3E7Z2 85 aa3.39□□□□□ -1.87
CDC28YBR160W YHR213W-BQ8TGK1 99 aa3.39□□□□□ -1.87
CDC28YBR160W SGF11Q03067 99 aa3.38□□□□□ -1.87
CDC28YBR160W YDR115WQ04598 105 aa3.38□□□□□ -1.87
CDC28YBR160W YLR162WQ06235 118 aa3.38□□□□□ -1.87
CDC28YBR160W SPC1P46965 94 aa3.37□□□□□ -1.87
CDC28YBR160W YJL133C-AQ3E7A3 74 aa3.37□□□□□ -1.87
CDC28YBR160W HHF1P02309 103 aaKnown RBP3.36□□□□□ -1.87
CDC28YBR160W GIS2P53849 153 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
CDC28YBR160W YGR121W-AQ3E816 71 aa3.36□□□□□ -1.87
CDC28YBR160W YHL005CP38752 130 aa3.35□□□□□ -1.87
CDC28YBR160W ECM19Q06011 112 aa3.35□□□□□ -1.87
CDC28YBR160W YLL066W-BQ8TGJ7 56 aa3.35□□□□□ -1.87
CDC28YBR160W SPT4P32914 102 aaPredicted RBP3.34□□□□□ -1.87
CDC28YBR160W YKL065W-AQ2V2P2 73 aa3.34□□□□□ -1.87
CDC28YBR160W YEL045CP32616 141 aa3.33□□□□□ -1.88
CDC28YBR160W YER078W-AQ3E7A2 54 aa3.33□□□□□ -1.88
CDC28YBR160W YGR035W-AQ45U48 73 aa3.33□□□□□ -1.88
CDC28YBR160W Q0032Q9ZZX7 96 aa3.33□□□□□ -1.88
CDC28YBR160W YAR023CD6VPM8 179 aa3.32□□□□□ -1.88
CDC28YBR160W RTC6O14464 93 aa3.32□□□□□ -1.88
CDC28YBR160W RPS30AP0CX33 63 aaKnown RBP3.32□□□□□ -1.88
CDC28YBR160W RPS30BP0CX34 63 aaKnown RBP3.32□□□□□ -1.88
CDC28YBR160W LIP1Q03579 150 aa3.32□□□□□ -1.88
CDC28YBR160W YNL277W-AQ3E7Z0 62 aa3.32□□□□□ -1.88
CDC28YBR160W YJR085CP47131 105 aaKnown RBP3.31□□□□□ -1.88
CDC28YBR160W YGL041C-BQ3E750 60 aa3.31□□□□□ -1.88
CDC28YBR160W RPL43AP0CX25 92 aaKnown RBP3.3□□□□□ -1.88
CDC28YBR160W RPL43BP0CX26 92 aa3.3□□□□□ -1.88
CDC28YBR160W PEX22P39718 180 aa3.3□□□□□ -1.88
CDC28YBR160W YOR381W-AQ3E804 55 aa3.3□□□□□ -1.88
CDC28YBR160W YOL013W-AP0C272 63 aaPredicted RBP3.29□□□□□ -1.88
CDC28YBR160W YIL102CP40488 101 aa3.29□□□□□ -1.88
CDC28YBR160W YGL193CP53097 103 aa3.29□□□□□ -1.88
CDC28YBR160W DDR2P89113 61 aa3.29□□□□□ -1.88
CDC28YBR160W YOR072WQ08486 104 aa3.29□□□□□ -1.88
CDC28YBR160W YOR268CQ08734 132 aa3.29□□□□□ -1.88
CDC28YBR160W MIC10Q96VH5 97 aa3.29□□□□□ -1.88
CDC28YBR160W PRP8P33334 2413 aaKnown RBP3.28□□□□□ -1.88
CDC28YBR160W YMR122CQ03879 124 aa3.28□□□□□ -1.88
CDC28YBR160W YJL197C-AP0C5P0 93 aa3.27□□□□□ -1.89
CDC28YBR160W BSC4P53841 131 aa3.27□□□□□ -1.89
CDC28YBR160W SNA2P56508 79 aa3.27□□□□□ -1.89
CDC28YBR160W YHR007C-AQ07074 71 aa3.27□□□□□ -1.89
CDC28YBR160W RRT15Q3E811 62 aa3.27□□□□□ -1.89
CDC28YBR160W MEC1P38111 2368 aa3.26□□□□□ -1.89
CDC28YBR160W YER188C-AP0C0V2 99 aa3.25□□□□□ -1.89
CDC28YBR160W YAR064WP39563 99 aa3.25□□□□□ -1.89
CDC28YBR160W HUB1Q6Q546 73 aa3.25□□□□□ -1.89
CDC28YBR160W YHR125WP38831 101 aa3.24□□□□□ -1.89
CDC28YBR160W OST5Q92316 86 aa3.24□□□□□ -1.89
CDC28YBR160W SDH6Q3E785 79 aa3.22□□□□□ -1.89
CDC28YBR160W AUA1P32450 94 aa3.21□□□□□ -1.9
CDC28YBR160W YPR153WQ06537 140 aa3.21□□□□□ -1.9
CDC28YBR160W YLR157W-DP0CE99 70 aa3.2□□□□□ -1.9
CDC28YBR160W YMR001C-AQ8TGS9 76 aa3.19□□□□□ -1.9
CDC28YBR160W MMS2P53152 137 aa3.18□□□□□ -1.9
CDC28YBR160W YOL097W-AQ3E7Y9 61 aa3.18□□□□□ -1.9
CDC28YBR160W YDL012CQ12489 107 aa3.17□□□□□ -1.9
CDC28YBR160W TEL1P38110 2787 aa3.16□□□□□ -1.9
CDC28YBR160W SPG1P50088 95 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 71.1 ms