RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C SFT1P43682 97 aa3.91□□□□□ -1.78
LDB7YBL006C FYV7Q12247 151 aa3.91□□□□□ -1.78
LDB7YBL006C YHL005CP38752 130 aa3.9□□□□□ -1.79
LDB7YBL006C FUN14P18411 198 aa3.88□□□□□ -1.79
LDB7YBL006C YKL069WP36088 180 aa3.88□□□□□ -1.79
LDB7YBL006C RSM18P40033 138 aa3.87□□□□□ -1.79
LDB7YBL006C HUR1P45820 110 aa3.87□□□□□ -1.79
LDB7YBL006C YNL122CP53921 115 aaPredicted RBP3.86□□□□□ -1.79
LDB7YBL006C TMA7Q3E764 64 aaKnown RBP3.86□□□□□ -1.79
LDB7YBL006C DSE2P38844 325 aa3.85□□□□□ -1.79
LDB7YBL006C YER181CP40097 107 aa3.85□□□□□ -1.79
LDB7YBL006C OST2P46964 130 aa3.85□□□□□ -1.79
LDB7YBL006C TDA8Q6B2U8 126 aa3.85□□□□□ -1.79
LDB7YBL006C NHP2P32495 156 aaPredicted RBP3.84□□□□□ -1.79
LDB7YBL006C YEL045CP32616 141 aa3.83□□□□□ -1.8
LDB7YBL006C POP7P38291 140 aa3.83□□□□□ -1.8
LDB7YBL006C LSM6Q06406 86 aaKnown RBP3.83□□□□□ -1.8
LDB7YBL006C PAI3P01094 68 aa3.82□□□□□ -1.8
LDB7YBL006C YLR363W-AQ3E747 85 aa3.82□□□□□ -1.8
LDB7YBL006C YLR157W-DP0CE99 70 aa3.81□□□□□ -1.8
LDB7YBL006C COX7P10174 60 aa3.81□□□□□ -1.8
LDB7YBL006C YAR1P46683 200 aa3.8□□□□□ -1.8
LDB7YBL006C CWC27Q02770 301 aa3.8□□□□□ -1.8
LDB7YBL006C YOL097W-AQ3E7Y9 61 aa3.8□□□□□ -1.8
LDB7YBL006C RSM19P53733 91 aaPredicted RBP3.79□□□□□ -1.8
LDB7YBL006C YLR296WQ05898 108 aa3.79□□□□□ -1.8
LDB7YBL006C UIP3P39547 235 aa3.77□□□□□ -1.81
LDB7YBL006C TSC3Q3E790 80 aa3.77□□□□□ -1.81
LDB7YBL006C YFR009W-AP0C5M9 85 aa3.76□□□□□ -1.81
LDB7YBL006C YJR107C-AP0CT86 78 aa3.76□□□□□ -1.81
LDB7YBL006C YDL085C-AQ3E7B7 68 aaKnown RBP3.76□□□□□ -1.81
LDB7YBL006C ATP18P81450 59 aa3.75□□□□□ -1.81
LDB7YBL006C YLR162WQ06235 118 aa3.75□□□□□ -1.81
LDB7YBL006C YHR213W-BQ8TGK1 99 aa3.75□□□□□ -1.81
LDB7YBL006C SAE3P89114 91 aa3.74□□□□□ -1.81
LDB7YBL006C ECM19Q06011 112 aa3.74□□□□□ -1.81
LDB7YBL006C YJL133C-AQ3E7A3 74 aa3.73□□□□□ -1.81
LDB7YBL006C MIC10Q96VH5 97 aa3.73□□□□□ -1.81
LDB7YBL006C YCR043CP25361 127 aa3.72□□□□□ -1.81
LDB7YBL006C LSM8P47093 109 aaKnown RBP3.72□□□□□ -1.81
LDB7YBL006C ICS3P47034 131 aa3.69□□□□□ -1.82
LDB7YBL006C YIL102C-AQ2V2P5 75 aa3.68□□□□□ -1.82
LDB7YBL006C SHH4Q06236 168 aa3.67□□□□□ -1.82
LDB7YBL006C COX23P38824 151 aa3.66□□□□□ -1.82
LDB7YBL006C YOL014WQ08110 124 aa3.64□□□□□ -1.83
LDB7YBL006C YHR073W-AP0C5N7 58 aa3.63□□□□□ -1.83
LDB7YBL006C YNL198CP40166 100 aa3.63□□□□□ -1.83
LDB7YBL006C YER187WP40102 141 aa3.62□□□□□ -1.83
LDB7YBL006C GLC8P41818 229 aa3.62□□□□□ -1.83
LDB7YBL006C COF1Q03048 143 aaKnown RBP3.62□□□□□ -1.83
LDB7YBL006C FYV12Q08559 129 aa3.62□□□□□ -1.83
LDB7YBL006C YDR381C-AQ3E6R5 114 aa3.61□□□□□ -1.83
LDB7YBL006C Q0017Q9ZZX8 53 aa3.61□□□□□ -1.83
LDB7YBL006C YJR128WP47162 119 aa3.6□□□□□ -1.83
LDB7YBL006C EDC1P53080 175 aaPredicted RBP3.6□□□□□ -1.83
LDB7YBL006C YBR182C-AQ8TGU6 64 aa3.6□□□□□ -1.83
LDB7YBL006C YDL012CQ12489 107 aa3.59□□□□□ -1.83
LDB7YBL006C YLR361C-AQ3E795 98 aa3.58□□□□□ -1.84
LDB7YBL006C YPR170W-BP0C5R9 85 aa3.57□□□□□ -1.84
LDB7YBL006C ISD11Q6Q560 94 aa3.57□□□□□ -1.84
LDB7YBL006C RPL38P49167 78 aaKnown RBP3.56□□□□□ -1.84
LDB7YBL006C RPL36AP05745 100 aaPredicted RBP3.54□□□□□ -1.84
LDB7YBL006C TDA2P40045 126 aa3.54□□□□□ -1.84
LDB7YBL006C YGR164WP53291 111 aa3.54□□□□□ -1.84
LDB7YBL006C YAR064WP39563 99 aa3.53□□□□□ -1.84
LDB7YBL006C YDR210WQ03482 75 aa3.53□□□□□ -1.84
LDB7YBL006C YOR316C-AQ3E806 69 aa3.53□□□□□ -1.84
LDB7YBL006C YJL009WP47078 108 aa3.52□□□□□ -1.85
LDB7YBL006C YPR153WQ06537 140 aa3.52□□□□□ -1.85
LDB7YBL006C PBI2P0CT04 75 aaKnown RBP3.5□□□□□ -1.85
LDB7YBL006C YCR050CP25630 102 aa3.5□□□□□ -1.85
LDB7YBL006C YHL042WP38729 150 aa3.5□□□□□ -1.85
LDB7YBL006C RPA12P32529 125 aaKnown RBP3.49□□□□□ -1.85
LDB7YBL006C SKI6P46948 246 aaPredicted RBP3.48□□□□□ -1.85
LDB7YBL006C YOR304C-AO14468 76 aa3.47□□□□□ -1.85
LDB7YBL006C YJL144WP47009 104 aa3.46□□□□□ -1.86
LDB7YBL006C ATP20Q12233 115 aa3.46□□□□□ -1.86
LDB7YBL006C RPP2AP05319 106 aaKnown RBP3.43□□□□□ -1.86
LDB7YBL006C RAD6P06104 172 aa3.42□□□□□ -1.86
LDB7YBL006C YGL034CP53186 121 aa3.41□□□□□ -1.86
LDB7YBL006C YPL080CQ02826 108 aa3.4□□□□□ -1.87
LDB7YBL006C YCR085WP25650 117 aa3.38□□□□□ -1.87
LDB7YBL006C LIP1Q03579 150 aa3.36□□□□□ -1.87
LDB7YBL006C HHF1P02309 103 aaKnown RBP3.32□□□□□ -1.88
LDB7YBL006C YBR016WP38216 128 aa3.31□□□□□ -1.88
LDB7YBL006C YLR285C-AQ3E771 56 aa3.31□□□□□ -1.88
LDB7YBL006C EMC6Q12431 108 aa3.3□□□□□ -1.88
LDB7YBL006C YGR039WP53225 103 aa3.29□□□□□ -1.88
LDB7YBL006C YBL008W-AQ3E821 79 aa3.28□□□□□ -1.88
LDB7YBL006C YLR255CO13574 117 aa3.27□□□□□ -1.89
LDB7YBL006C YSY6P38374 65 aa3.27□□□□□ -1.89
LDB7YBL006C ATX1P38636 73 aa3.26□□□□□ -1.89
LDB7YBL006C YGR146C-AQ8TGT9 53 aa3.26□□□□□ -1.89
LDB7YBL006C COX8P04039 78 aa3.25□□□□□ -1.89
LDB7YBL006C YOL013W-AP0C272 63 aaPredicted RBP3.25□□□□□ -1.89
LDB7YBL006C LSO2Q3E772 92 aaKnown RBP3.25□□□□□ -1.89
LDB7YBL006C INO4P13902 151 aa3.24□□□□□ -1.89
LDB7YBL006C RPS29AP41057 56 aaKnown RBP3.23□□□□□ -1.89
LDB7YBL006C RPS29BP41058 56 aaKnown RBP3.23□□□□□ -1.89
LDB7YBL006C YKL065W-AQ2V2P2 73 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms