RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 CSTF1Q05048 431 aaKnown RBP16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 MTAPQ13126 283 aa16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 ZNF687Q8N1G0 1237 aa16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 OSCP1Q8WVF1 389 aa16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 OVCA2Q8WZ82 227 aa16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 KAT5Q92993 513 aa16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 FBXO44Q9H4M3 255 aa16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 CFAP97Q9P2B7 532 aa16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 PCDHB4Q9Y5E5 795 aa16.47■□□□□ 0.23
AC009088.3-201ENST00000563605 CACNA1HO95180 2353 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 CYP26A1O43174 497 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 TBX18O95935 607 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 CHRNB1P11230 501 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 PFKLP17858 780 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 TBXAS1P24557 533 aaPredicted RBP16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 RPS9P46781 194 aaKnown RBP16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 USP4Q13107 963 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 GOLGA7BQ2TAP0 167 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 DPCR1Q3MIW9 517 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 TSSK4Q6SA08 328 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 TMEM270Q6UE05 265 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 ARHGEF19Q8IW93 802 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 CPA6Q8N4T0 437 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 MSANTD3Q96H12 275 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 CNOT6LQ96LI5 555 aaKnown RBP16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 ECT2Q9H8V3 914 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 TLR8Q9NR97 1041 aaKnown RBP16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 R4GN57 208 aa16.46■□□□□ 0.23
AC009088.3-201ENST00000563605 NUP210Q8TEM1 1887 aaPredicted RBP16.46■□□□□ 0.22
AC009088.3-201ENST00000563605 PMM2O15305 246 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 P4HA2O15460 535 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 CALCAP01258 141 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 SP9P0CG40 484 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 IRF1P10914 325 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 MAGEA9P43362 315 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 MTIF2P46199 727 aaKnown RBP16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 MARSP56192 900 aaKnown RBP16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 LRRC32Q14392 662 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 EML3Q32P44 896 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 SGO2Q562F6 1265 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 HSP90AA4PQ58FG1 418 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 ARHGAP17Q68EM7 881 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 NAIF1Q69YI7 327 aaPredicted RBP16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 MAML2Q8IZL2 1156 aaPredicted RBP16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 LMO3Q8TAP4 145 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 UBA3Q8TBC4 463 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 ATP2A3Q93084 1043 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 CRACR2AQ9BSW2 395 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 INTS2Q9H0H0 1204 aaKnown RBP16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 NUDT5Q9UKK9 219 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 SCML2Q9UQR0 700 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 ZNF638Q14966 1978 aaKnown RBP16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 GREB1Q4ZG55 1949 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 DENND4CQ5VZ89 1909 aa16.45■□□□□ 0.22
AC009088.3-201ENST00000563605 A0A1W2PQH9 124 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 FAM92AA1XBS5 289 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 RNF225M0QZC1 329 aaPredicted RBP16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 TLR5O60602 858 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 OLFM2O95897 454 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 ZDHHC11BP0C7U3 371 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 GJA4P35212 333 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 GALK1P51570 392 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 KIF11P52732 1056 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 SLC8A3P57103 927 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 AMPD2Q01433 879 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 NR1H3Q13133 447 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 SNX30Q5VWJ9 437 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 C1orf228Q6PIY5 440 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 Q6ZS52 159 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 PIGZQ86VD9 579 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 TTC30AQ86WT1 665 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 UBR7Q8N806 425 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 ANKRD52Q8NB46 1076 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 GPT2Q8TD30 523 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 CHFRQ96EP1 664 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 FAM124BQ9H5Z6 455 aaPredicted RBP16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 NMUR1Q9HB89 426 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 FBRSL1Q9HCM7 1045 aaKnown RBP16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 OSER1Q9NX31 292 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 HESX1Q9UBX0 185 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 NAGPAQ9UK23 515 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 TSPAN16Q9UKR8 245 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 OBSL1O75147 1896 aa16.44■□□□□ 0.22
AC009088.3-201ENST00000563605 TULP2O00295 520 aa16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 MDM4O15151 490 aa16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 VDRP11473 427 aa16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 RARGP13631 454 aa16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 TCF3P15923 654 aa16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 PDE4CQ08493 712 aa16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 GRSF1Q12849 480 aaKnown RBP eCLIP16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 DGKKQ5KSL6 1271 aa16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 IRF2BP1Q8IU81 584 aa16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 TFAP2BQ92481 460 aa16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 WBP2Q969T9 261 aa16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 CHRDQ9H2X0 955 aa16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 PNPLA8Q9NP80 782 aa16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 UBE2TQ9NPD8 197 aaPredicted RBP16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 DACH1Q9UI36 760 aa16.43■□□□□ 0.22
AC009088.3-201ENST00000563605 SH3BP1Q9Y3L3 701 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms