RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 NISCHQ9Y2I1 1504 aa37.94■■■■□ 3.66
AC009088.3-201ENST00000563605 CCDC180Q9P1Z9 1646 aa33.68■■■□□ 2.98
AC009088.3-201ENST00000563605 ABCC9O60706 1549 aa33.42■■■□□ 2.94
AC009088.3-201ENST00000563605 DCAF8L2P0C7V8 631 aa32.13■■■□□ 2.73
AC009088.3-201ENST00000563605 RB1CC1Q8TDY2 1594 aa31.9■■■□□ 2.7
AC009088.3-201ENST00000563605 NACADO15069 1562 aa31.8■■■□□ 2.68
AC009088.3-201ENST00000563605 ZCCHC6Q5VYS8 1495 aaKnown RBP31.52■■■□□ 2.64
AC009088.3-201ENST00000563605 MYO15BQ96JP2 1530 aa31.45■■■□□ 2.63
AC009088.3-201ENST00000563605 PABPN1Q86U42 306 aaKnown RBP eCLIP31.31■■■□□ 2.6
AC009088.3-201ENST00000563605 DCAF1Q9Y4B6 1507 aa31.27■■■□□ 2.6
AC009088.3-201ENST00000563605 UNC13AQ9UPW8 1703 aa31.1■■■□□ 2.57
AC009088.3-201ENST00000563605 BICRAQ9NZM4 1560 aa30.95■■■□□ 2.54
AC009088.3-201ENST00000563605 DNAJC5BQ9UF47 199 aa30.94■■■□□ 2.54
AC009088.3-201ENST00000563605 SCRIBQ14160 1630 aa30.89■■■□□ 2.54
AC009088.3-201ENST00000563605 SHROOM4Q9ULL8 1493 aa30.48■■■□□ 2.47
AC009088.3-201ENST00000563605 EIF4G1Q04637 1599 aaKnown RBP30.16■■■□□ 2.42
AC009088.3-201ENST00000563605 CC2D2AQ9P2K1 1620 aa30.11■■■□□ 2.41
AC009088.3-201ENST00000563605 CECR2Q9BXF3 1484 aa30■■■□□ 2.39
AC009088.3-201ENST00000563605 SMARCA4P51532 1647 aa29.45■■■□□ 2.3
AC009088.3-201ENST00000563605 ATAD2BQ9ULI0 1458 aa29.4■■■□□ 2.3
AC009088.3-201ENST00000563605 BAZ1AQ9NRL2 1556 aaPredicted RBP29.39■■■□□ 2.3
AC009088.3-201ENST00000563605 NCAPD3P42695 1498 aa29.39■■■□□ 2.3
AC009088.3-201ENST00000563605 SMARCA2P51531 1590 aa29.3■■■□□ 2.28
AC009088.3-201ENST00000563605 MROH2BQ7Z745 1585 aa29.28■■■□□ 2.28
AC009088.3-201ENST00000563605 BAZ1BQ9UIG0 1483 aaKnown RBP29.17■■■□□ 2.26
AC009088.3-201ENST00000563605 HMGXB3Q12766 1538 aa29.15■■■□□ 2.26
AC009088.3-201ENST00000563605 PEG3Q9GZU2 1588 aa29.09■■■□□ 2.25
AC009088.3-201ENST00000563605 WIZO95785 1651 aa28.94■■■□□ 2.22
AC009088.3-201ENST00000563605 RSF1Q96T23 1441 aaPredicted RBP28.89■■■□□ 2.22
AC009088.3-201ENST00000563605 NESP48681 1621 aa28.84■■■□□ 2.21
AC009088.3-201ENST00000563605 ERCC6Q03468 1493 aa28.8■■■□□ 2.2
AC009088.3-201ENST00000563605 LAMC3Q9Y6N6 1575 aa28.59■■■□□ 2.17
AC009088.3-201ENST00000563605 CADPSQ9ULU8 1353 aa28.58■■■□□ 2.17
AC009088.3-201ENST00000563605 TOP2AP11388 1531 aaKnown RBP28.57■■■□□ 2.16
AC009088.3-201ENST00000563605 PDS5BQ9NTI5 1447 aa28.51■■■□□ 2.15
AC009088.3-201ENST00000563605 CUX2O14529 1486 aa28.45■■■□□ 2.14
AC009088.3-201ENST00000563605 KIF21AQ7Z4S6 1674 aa28.38■■■□□ 2.13
AC009088.3-201ENST00000563605 CCDC88BA6NC98 1476 aa28.33■■■□□ 2.13
AC009088.3-201ENST00000563605 CFTRP13569 1480 aa28.32■■■□□ 2.12
AC009088.3-201ENST00000563605 THOC2Q8NI27 1593 aaKnown RBP28.29■■■□□ 2.12
AC009088.3-201ENST00000563605 FANCD2Q9BXW9 1451 aa28.24■■■□□ 2.11
AC009088.3-201ENST00000563605 SUPT5HO00267 1087 aaKnown RBP28.23■■■□□ 2.11
AC009088.3-201ENST00000563605 MRC2Q9UBG0 1479 aa28.21■■■□□ 2.11
AC009088.3-201ENST00000563605 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
AC009088.3-201ENST00000563605 WDR62O43379 1518 aa28.05■■■□□ 2.08
AC009088.3-201ENST00000563605 DNAJC5Q9H3Z4 198 aa27.98■■■□□ 2.07
AC009088.3-201ENST00000563605 URB2Q14146 1524 aaKnown RBP27.96■■■□□ 2.07
AC009088.3-201ENST00000563605 PRDM2Q13029 1718 aa27.92■■■□□ 2.06
AC009088.3-201ENST00000563605 TOPBP1Q92547 1522 aa27.75■■■□□ 2.03
AC009088.3-201ENST00000563605 ABCC8Q09428 1581 aa27.69■■■□□ 2.02
AC009088.3-201ENST00000563605 DNMBPQ6XZF7 1577 aa27.65■■■□□ 2.02
AC009088.3-201ENST00000563605 IFT140Q96RY7 1462 aa27.62■■■□□ 2.01
AC009088.3-201ENST00000563605 ZNF608Q9ULD9 1512 aaPredicted RBP27.57■■■□□ 2
AC009088.3-201ENST00000563605 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
AC009088.3-201ENST00000563605 CUX1P39880 1505 aa27.46■■□□□ 1.99
AC009088.3-201ENST00000563605 RAD54L2Q9Y4B4 1467 aa27.46■■□□□ 1.99
AC009088.3-201ENST00000563605 SOGA1O94964 1423 aa27.46■■□□□ 1.99
AC009088.3-201ENST00000563605 AQRO60306 1485 aaKnown RBP eCLIP27.43■■□□□ 1.98
AC009088.3-201ENST00000563605 FGD5Q6ZNL6 1462 aa27.43■■□□□ 1.98
AC009088.3-201ENST00000563605 OSCARQ8IYS5 282 aa27.42■■□□□ 1.98
AC009088.3-201ENST00000563605 TARBP1Q13395 1621 aaKnown RBP27.41■■□□□ 1.98
AC009088.3-201ENST00000563605 TDRD9Q8NDG6 1382 aaKnown RBP27.38■■□□□ 1.97
AC009088.3-201ENST00000563605 EIF4G3O43432 1585 aaKnown RBP27.35■■□□□ 1.97
AC009088.3-201ENST00000563605 FBLN2P98095 1184 aa27.28■■□□□ 1.96
AC009088.3-201ENST00000563605 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.95
AC009088.3-201ENST00000563605 SYNJ1O43426 1573 aa27.14■■□□□ 1.94
AC009088.3-201ENST00000563605 TOP2BQ02880 1626 aa27.12■■□□□ 1.93
AC009088.3-201ENST00000563605 TRIM41Q8WV44 630 aa27.11■■□□□ 1.93
AC009088.3-201ENST00000563605 SNAPC4Q5SXM2 1469 aa27.11■■□□□ 1.93
AC009088.3-201ENST00000563605 CHMP7Q8WUX9 453 aaPredicted RBP27.1■■□□□ 1.93
AC009088.3-201ENST00000563605 GRIN2BQ13224 1484 aa27.1■■□□□ 1.93
AC009088.3-201ENST00000563605 GAPVD1Q14C86 1478 aa27.09■■□□□ 1.93
AC009088.3-201ENST00000563605 ABCA10Q8WWZ4 1543 aa27.09■■□□□ 1.93
AC009088.3-201ENST00000563605 BIVM-ERCC5R4GMW8 1640 aa27.08■■□□□ 1.93
AC009088.3-201ENST00000563605 WDR97A6NE52 1622 aa27.07■■□□□ 1.92
AC009088.3-201ENST00000563605 CHD1O14646 1710 aa27.04■■□□□ 1.92
AC009088.3-201ENST00000563605 MAGI1Q96QZ7 1491 aaPredicted RBP27■■□□□ 1.91
AC009088.3-201ENST00000563605 ABCA5Q8WWZ7 1642 aa26.95■■□□□ 1.91
AC009088.3-201ENST00000563605 SYNJ2O15056 1496 aa26.93■■□□□ 1.9
AC009088.3-201ENST00000563605 PBRM1Q86U86 1689 aa26.93■■□□□ 1.9
AC009088.3-201ENST00000563605 RIMBP3CA6NJZ7 1639 aa26.86■■□□□ 1.89
AC009088.3-201ENST00000563605 RIMBP3BA6NNM3 1639 aa26.86■■□□□ 1.89
AC009088.3-201ENST00000563605 RIMBP3Q9UFD9 1639 aa26.86■■□□□ 1.89
AC009088.3-201ENST00000563605 ARHGEF11O15085 1522 aa26.85■■□□□ 1.89
AC009088.3-201ENST00000563605 CYB5RLQ6IPT4 315 aa26.8■■□□□ 1.88
AC009088.3-201ENST00000563605 FHAD1B1AJZ9 1412 aa26.76■■□□□ 1.87
AC009088.3-201ENST00000563605 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
AC009088.3-201ENST00000563605 GRIN2AQ12879 1464 aa26.74■■□□□ 1.87
AC009088.3-201ENST00000563605 ADAMTS12P58397 1594 aa26.73■■□□□ 1.87
AC009088.3-201ENST00000563605 CLASP1Q7Z460 1538 aa26.73■■□□□ 1.87
AC009088.3-201ENST00000563605 KIF27Q86VH2 1401 aa26.7■■□□□ 1.86
AC009088.3-201ENST00000563605 IGF1RP08069 1367 aa26.65■■□□□ 1.86
AC009088.3-201ENST00000563605 ARAP1Q96P48 1450 aa26.63■■□□□ 1.85
AC009088.3-201ENST00000563605 CEP170Q5SW79 1584 aa26.6■■□□□ 1.85
AC009088.3-201ENST00000563605 NUP160Q12769 1436 aa26.6■■□□□ 1.85
AC009088.3-201ENST00000563605 CARMIL1Q5VZK9 1371 aa26.49■■□□□ 1.83
AC009088.3-201ENST00000563605 JPH4Q96JJ6 628 aa26.48■■□□□ 1.83
AC009088.3-201ENST00000563605 RUSC2Q8N2Y8 1516 aa26.46■■□□□ 1.83
AC009088.3-201ENST00000563605 ERCC6L2Q5T890 1561 aa26.45■■□□□ 1.82
AC009088.3-201ENST00000563605 CUL7Q14999 1698 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 204.9 ms