RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Krt16Q9Z2K1 469 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Sept5Q9Z2Q6 369 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Znf106O88466 1888 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Cep350E9Q309 3095 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Irs2P81122 1321 aa15.43■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Lama3Q61789 3330 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Rabgap1lA6H6A9 815 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Gm10719E9Q7T3 227 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Gfra2O08842 464 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 KlO35082 1014 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Psmc3O88685 442 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Sypl2O89104 264 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Gjc1P28229 396 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Rpl10aP53026 217 aaKnown RBP15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Sesn2P58043 480 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Zscan2Q07230 614 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Plpp4Q0VBU9 271 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Cd6Q61003 665 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 HpseQ6YGZ1 535 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Gpr151Q7TSN6 422 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 March4Q80TE3 409 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Adcy2Q80TL1 1090 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Creb3l2Q8BH52 521 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Dars2Q8BIP0 653 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Smad3Q8BUN5 425 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 AA792892Q8C6S1 278 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Fbxl13Q8CDU4 790 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Phc3Q8CHP6 981 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ddit4Q9D3F7 229 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Cpne8Q9DC53 577 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Nmnat1Q9EPA7 285 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 NbnQ9R207 751 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Grk1Q9WVL4 564 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ptgdr2Q9Z2J6 382 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Krt27Q9Z320 448 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Umodl1Q5DID3 1319 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 CitP49025 2055 aa15.42■□□□□ 0.06
Ercc1-201ENSMUST00000003645 FancfE9Q5Z5 343 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Tspyl1O88852 379 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Lrrc4bP0C192 709 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 MsnP26041 577 aaKnown RBP15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 FynP39688 537 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Stmn1P54227 149 aaKnown RBP15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Itga11P61622 1188 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Usp46P62069 366 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 YwhazP63101 245 aaKnown RBP15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Adcyap1r1P70205 496 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Cct6bQ61390 531 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ptpn14Q62130 1189 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Q8C4P0 716 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Prl7b1Q8CGZ9 251 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Trim61Q8JZK6 461 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Nle1Q8VEJ4 485 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Twf1Q91YR1 350 aaKnown RBP15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Mettl13Q91YR5 698 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 PawrQ925B0 333 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Trps1Q925H1 1281 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Rnf34Q99KR6 376 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Slc25a11Q9CR62 314 aaKnown RBP15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Cog8Q9JJA2 640 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Trp53inp1Q9QXE4 239 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Pck1Q9Z2V4 622 aa15.41■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Gm12695A2AGB2 545 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ralgps1A2AR50 585 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 A930018M24RikB7ZMY3 218 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Prdm15E9Q8T2 1174 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 SrgnP13609 152 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Hmga1P17095 107 aaKnown RBP15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Slc1a1P51906 523 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 TankP70347 448 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Gzf1Q4VBD9 706 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Fbxw11Q5SRY7 542 aaKnown RBP15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Arhgap30Q640N3 1101 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Wnt8aQ64527 354 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 KaznQ69ZS8 779 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 PdgfrlQ6PE55 375 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Rasa4Q6PFQ7 802 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Trit1Q80UN9 467 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Fbxl21Q8BFZ4 434 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Nop53Q8BK35 484 aaKnown RBP15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Maats1Q8BRC6 783 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Tbc1d14Q8CGA2 694 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Ccdc12Q8R344 166 aaKnown RBP15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Znf622Q91VY9 476 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Fads1Q920L1 447 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 TrabdQ99JY4 376 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Thap12Q9CUX1 758 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 ArskQ9D2L1 553 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Q9D4A5 307 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 ThegQ9JMB1 375 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Gbf1Q6DFZ1 1861 aa15.4■□□□□ 0.06
Ercc1-201ENSMUST00000003645 Malrd1A2AJX4 2123 aa15.39■□□□□ 0.05
Ercc1-201ENSMUST00000003645 Ighv11-2A0A075B5R8 117 aa15.39■□□□□ 0.05
Ercc1-201ENSMUST00000003645 Gm5483B2RV77 97 aa15.39■□□□□ 0.05
Ercc1-201ENSMUST00000003645 Gm10722F6VLK5 217 aa15.39■□□□□ 0.05
Ercc1-201ENSMUST00000003645 Kifc3O35231 824 aa15.39■□□□□ 0.05
Ercc1-201ENSMUST00000003645 Dsg3O35902 993 aa15.39■□□□□ 0.05
Ercc1-201ENSMUST00000003645 PargO88622 969 aaKnown RBP15.39■□□□□ 0.05
Ercc1-201ENSMUST00000003645 Gas2P11862 314 aaKnown RBP15.39■□□□□ 0.05
Ercc1-201ENSMUST00000003645 Klra1P20937 262 aa15.39■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms