Protein–RNA interactions for Protein: O35902

Dsg3, Desmoglein-3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dsg3O35902 Gm25239-201ENSMUST00000174915 86 ntBASIC41.75■■■■■ 4.27
Dsg3O35902 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.82■■■■□ 3.8
Dsg3O35902 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
Dsg3O35902 Gm24109-201ENSMUST00000175489 103 ntBASIC36.39■■■■□ 3.42
Dsg3O35902 Gm15042-201ENSMUST00000120212 883 ntBASIC36.07■■■■□ 3.36
Dsg3O35902 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.26■■■■□ 3.24
Dsg3O35902 Gm15045-201ENSMUST00000117359 883 ntBASIC35.2■■■■□ 3.23
Dsg3O35902 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
Dsg3O35902 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
Dsg3O35902 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Dsg3O35902 Gm23366-201ENSMUST00000175022 89 ntBASIC34.79■■■■□ 3.16
Dsg3O35902 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Dsg3O35902 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Dsg3O35902 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.12■■■■□ 3.05
Dsg3O35902 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.93■■■■□ 3.02
Dsg3O35902 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.78■■■■□ 3
Dsg3O35902 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.76■■■□□ 2.99
Dsg3O35902 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Dsg3O35902 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
Dsg3O35902 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Dsg3O35902 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.4■■■□□ 2.94
Dsg3O35902 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Dsg3O35902 Gm25238-201ENSMUST00000174914 89 ntBASIC33.1■■■□□ 2.89
Dsg3O35902 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Dsg3O35902 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.09■■■□□ 2.89
Dsg3O35902 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Dsg3O35902 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.82■■■□□ 2.84
Dsg3O35902 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Dsg3O35902 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.59■■■□□ 2.81
Dsg3O35902 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Dsg3O35902 Psd-208ENSMUST00000224556 2034 ntBASIC32.4■■■□□ 2.78
Dsg3O35902 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.35■■■□□ 2.77
Dsg3O35902 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Dsg3O35902 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.75
Dsg3O35902 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Dsg3O35902 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Dsg3O35902 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Dsg3O35902 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
Dsg3O35902 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.99■■■□□ 2.71
Dsg3O35902 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.92■■■□□ 2.7
Dsg3O35902 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.89■■■□□ 2.7
Dsg3O35902 Gm25262-201ENSMUST00000174934 133 ntBASIC31.89■■■□□ 2.7
Dsg3O35902 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Dsg3O35902 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Dsg3O35902 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.66■■■□□ 2.66
Dsg3O35902 Gm27325-201ENSMUST00000175467 74 ntBASIC31.53■■■□□ 2.64
Dsg3O35902 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Dsg3O35902 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Dsg3O35902 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Dsg3O35902 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.36■■■□□ 2.61
Dsg3O35902 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.35■■■□□ 2.61
Dsg3O35902 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.33■■■□□ 2.61
Dsg3O35902 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
Dsg3O35902 Gm26115-201ENSMUST00000175605 87 ntBASIC31.26■■■□□ 2.59
Dsg3O35902 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Dsg3O35902 Rab21-202ENSMUST00000218831 843 ntBASIC31.22■■■□□ 2.59
Dsg3O35902 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.19■■■□□ 2.58
Dsg3O35902 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Dsg3O35902 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.18■■■□□ 2.58
Dsg3O35902 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Dsg3O35902 Gm8109-201ENSMUST00000194076 746 ntBASIC31.07■■■□□ 2.56
Dsg3O35902 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Dsg3O35902 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Dsg3O35902 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Dsg3O35902 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Dsg3O35902 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
Dsg3O35902 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.85■■■□□ 2.53
Dsg3O35902 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.85■■■□□ 2.53
Dsg3O35902 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
Dsg3O35902 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
Dsg3O35902 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.75■■■□□ 2.51
Dsg3O35902 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Dsg3O35902 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Dsg3O35902 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Dsg3O35902 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.6■■■□□ 2.49
Dsg3O35902 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.54■■■□□ 2.48
Dsg3O35902 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
Dsg3O35902 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Dsg3O35902 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.47■■■□□ 2.47
Dsg3O35902 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Dsg3O35902 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Dsg3O35902 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Dsg3O35902 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Dsg3O35902 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Dsg3O35902 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Dsg3O35902 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Dsg3O35902 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Dsg3O35902 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Dsg3O35902 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.29■■■□□ 2.44
Dsg3O35902 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.25■■■□□ 2.43
Dsg3O35902 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Dsg3O35902 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.18■■■□□ 2.42
Dsg3O35902 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Dsg3O35902 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Dsg3O35902 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.14■■■□□ 2.42
Dsg3O35902 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.06■■■□□ 2.4
Dsg3O35902 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Dsg3O35902 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.03■■■□□ 2.4
Dsg3O35902 Gm24804-201ENSMUST00000174982 85 ntBASIC30■■■□□ 2.39
Dsg3O35902 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms