Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Gm25239-201ENSMUST00000174915 86 ntBASIC41.25■■■■■ 4.19
Psmc3O88685 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.27■■■■□ 3.72
Psmc3O88685 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.7■■■■□ 3.63
Psmc3O88685 Gm24109-201ENSMUST00000175489 103 ntBASIC35.85■■■■□ 3.33
Psmc3O88685 Gm15042-201ENSMUST00000120212 883 ntBASIC35.82■■■■□ 3.32
Psmc3O88685 Gm15045-201ENSMUST00000117359 883 ntBASIC34.96■■■■□ 3.19
Psmc3O88685 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
Psmc3O88685 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
Psmc3O88685 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
Psmc3O88685 Gm23366-201ENSMUST00000175022 89 ntBASIC34.43■■■■□ 3.1
Psmc3O88685 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Psmc3O88685 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Psmc3O88685 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
Psmc3O88685 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.55■■■□□ 2.96
Psmc3O88685 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
Psmc3O88685 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.26■■■□□ 2.91
Psmc3O88685 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.22■■■□□ 2.91
Psmc3O88685 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
Psmc3O88685 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Psmc3O88685 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.04■■■□□ 2.88
Psmc3O88685 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Psmc3O88685 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Psmc3O88685 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.76■■■□□ 2.84
Psmc3O88685 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Psmc3O88685 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.65■■■□□ 2.82
Psmc3O88685 Gm25238-201ENSMUST00000174914 89 ntBASIC32.63■■■□□ 2.81
Psmc3O88685 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.58■■■□□ 2.81
Psmc3O88685 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
Psmc3O88685 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Psmc3O88685 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Psmc3O88685 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.25■■■□□ 2.75
Psmc3O88685 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Psmc3O88685 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.97■■■□□ 2.71
Psmc3O88685 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.95■■■□□ 2.7
Psmc3O88685 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Psmc3O88685 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Psmc3O88685 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.68■■■□□ 2.66
Psmc3O88685 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Psmc3O88685 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Psmc3O88685 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
Psmc3O88685 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.55■■■□□ 2.64
Psmc3O88685 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Psmc3O88685 Gm25262-201ENSMUST00000174934 133 ntBASIC31.4■■■□□ 2.62
Psmc3O88685 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.34■■■□□ 2.61
Psmc3O88685 Gm27325-201ENSMUST00000175467 74 ntBASIC31.33■■■□□ 2.61
Psmc3O88685 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.28■■■□□ 2.6
Psmc3O88685 Psd-208ENSMUST00000224556 2034 ntBASIC31.21■■■□□ 2.59
Psmc3O88685 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Psmc3O88685 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Psmc3O88685 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Psmc3O88685 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
Psmc3O88685 Rab21-202ENSMUST00000218831 843 ntBASIC30.93■■■□□ 2.54
Psmc3O88685 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.89■■■□□ 2.54
Psmc3O88685 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.87■■■□□ 2.53
Psmc3O88685 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Psmc3O88685 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.84■■■□□ 2.53
Psmc3O88685 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.76■■■□□ 2.51
Psmc3O88685 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
Psmc3O88685 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Psmc3O88685 Gm26115-201ENSMUST00000175605 87 ntBASIC30.71■■■□□ 2.51
Psmc3O88685 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.68■■■□□ 2.5
Psmc3O88685 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Psmc3O88685 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Psmc3O88685 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Psmc3O88685 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Psmc3O88685 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Psmc3O88685 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Psmc3O88685 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.52■■■□□ 2.48
Psmc3O88685 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.51■■■□□ 2.47
Psmc3O88685 Gm8109-201ENSMUST00000194076 746 ntBASIC30.51■■■□□ 2.47
Psmc3O88685 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.51■■■□□ 2.47
Psmc3O88685 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Psmc3O88685 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Psmc3O88685 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Psmc3O88685 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.34■■■□□ 2.45
Psmc3O88685 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
Psmc3O88685 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Psmc3O88685 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.29■■■□□ 2.44
Psmc3O88685 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Psmc3O88685 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.23■■■□□ 2.43
Psmc3O88685 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Psmc3O88685 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Psmc3O88685 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Psmc3O88685 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Psmc3O88685 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Psmc3O88685 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
Psmc3O88685 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30■■■□□ 2.39
Psmc3O88685 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Psmc3O88685 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.94■■■□□ 2.38
Psmc3O88685 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Psmc3O88685 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.88■■■□□ 2.37
Psmc3O88685 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.85■■■□□ 2.37
Psmc3O88685 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Psmc3O88685 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.79■■■□□ 2.36
Psmc3O88685 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Psmc3O88685 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.78■■■□□ 2.36
Psmc3O88685 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Psmc3O88685 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Psmc3O88685 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
Psmc3O88685 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms