Protein–RNA interactions for Protein: Q6PE55

Pdgfrl, Platelet-derived growth factor receptor-like protein, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrlQ6PE55 Gm25239-201ENSMUST00000174915 86 ntBASIC40.69■■■■■ 4.1
PdgfrlQ6PE55 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.65■■■■□ 3.62
PdgfrlQ6PE55 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
PdgfrlQ6PE55 Gm15042-201ENSMUST00000120212 883 ntBASIC35.49■■■■□ 3.27
PdgfrlQ6PE55 Gm24109-201ENSMUST00000175489 103 ntBASIC35.26■■■■□ 3.24
PdgfrlQ6PE55 Gm15045-201ENSMUST00000117359 883 ntBASIC34.65■■■■□ 3.14
PdgfrlQ6PE55 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
PdgfrlQ6PE55 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.36■■■■□ 3.09
PdgfrlQ6PE55 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
PdgfrlQ6PE55 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
PdgfrlQ6PE55 Gm23366-201ENSMUST00000175022 89 ntBASIC34.01■■■■□ 3.03
PdgfrlQ6PE55 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
PdgfrlQ6PE55 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
PdgfrlQ6PE55 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.23■■■□□ 2.91
PdgfrlQ6PE55 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
PdgfrlQ6PE55 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.92■■■□□ 2.86
PdgfrlQ6PE55 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.82■■■□□ 2.84
PdgfrlQ6PE55 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.67■■■□□ 2.82
PdgfrlQ6PE55 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
PdgfrlQ6PE55 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.62■■■□□ 2.81
PdgfrlQ6PE55 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
PdgfrlQ6PE55 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.55■■■□□ 2.8
PdgfrlQ6PE55 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
PdgfrlQ6PE55 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
PdgfrlQ6PE55 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PdgfrlQ6PE55 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
PdgfrlQ6PE55 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
PdgfrlQ6PE55 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.18■■■□□ 2.74
PdgfrlQ6PE55 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
PdgfrlQ6PE55 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.11■■■□□ 2.73
PdgfrlQ6PE55 Gm25238-201ENSMUST00000174914 89 ntBASIC32.11■■■□□ 2.73
PdgfrlQ6PE55 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
PdgfrlQ6PE55 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PdgfrlQ6PE55 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.92■■■□□ 2.7
PdgfrlQ6PE55 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
PdgfrlQ6PE55 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
PdgfrlQ6PE55 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
PdgfrlQ6PE55 Psd-208ENSMUST00000224556 2034 ntBASIC31.44■■■□□ 2.62
PdgfrlQ6PE55 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PdgfrlQ6PE55 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.33■■■□□ 2.61
PdgfrlQ6PE55 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PdgfrlQ6PE55 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.31■■■□□ 2.6
PdgfrlQ6PE55 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.19■■■□□ 2.58
PdgfrlQ6PE55 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
PdgfrlQ6PE55 Gm27325-201ENSMUST00000175467 74 ntBASIC31.08■■■□□ 2.57
PdgfrlQ6PE55 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.98■■■□□ 2.55
PdgfrlQ6PE55 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PdgfrlQ6PE55 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
PdgfrlQ6PE55 Gm25262-201ENSMUST00000174934 133 ntBASIC30.87■■■□□ 2.53
PdgfrlQ6PE55 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.53
PdgfrlQ6PE55 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.75■■■□□ 2.51
PdgfrlQ6PE55 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
PdgfrlQ6PE55 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PdgfrlQ6PE55 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PdgfrlQ6PE55 Rab21-202ENSMUST00000218831 843 ntBASIC30.6■■■□□ 2.49
PdgfrlQ6PE55 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.58■■■□□ 2.49
PdgfrlQ6PE55 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.52■■■□□ 2.48
PdgfrlQ6PE55 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.45■■■□□ 2.47
PdgfrlQ6PE55 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.41■■■□□ 2.46
PdgfrlQ6PE55 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
PdgfrlQ6PE55 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PdgfrlQ6PE55 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PdgfrlQ6PE55 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
PdgfrlQ6PE55 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.27■■■□□ 2.44
PdgfrlQ6PE55 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PdgfrlQ6PE55 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.21■■■□□ 2.43
PdgfrlQ6PE55 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
PdgfrlQ6PE55 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
PdgfrlQ6PE55 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
PdgfrlQ6PE55 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.14■■■□□ 2.42
PdgfrlQ6PE55 Gm26115-201ENSMUST00000175605 87 ntBASIC30.13■■■□□ 2.41
PdgfrlQ6PE55 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.1■■■□□ 2.41
PdgfrlQ6PE55 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PdgfrlQ6PE55 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PdgfrlQ6PE55 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
PdgfrlQ6PE55 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PdgfrlQ6PE55 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30■■■□□ 2.39
PdgfrlQ6PE55 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
PdgfrlQ6PE55 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
PdgfrlQ6PE55 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
PdgfrlQ6PE55 Gm8109-201ENSMUST00000194076 746 ntBASIC29.91■■■□□ 2.38
PdgfrlQ6PE55 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PdgfrlQ6PE55 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.84■■■□□ 2.37
PdgfrlQ6PE55 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PdgfrlQ6PE55 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
PdgfrlQ6PE55 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.8■■■□□ 2.36
PdgfrlQ6PE55 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
PdgfrlQ6PE55 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
PdgfrlQ6PE55 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.79■■■□□ 2.36
PdgfrlQ6PE55 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PdgfrlQ6PE55 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.75■■■□□ 2.35
PdgfrlQ6PE55 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.72■■■□□ 2.35
PdgfrlQ6PE55 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PdgfrlQ6PE55 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
PdgfrlQ6PE55 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.64■■■□□ 2.34
PdgfrlQ6PE55 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
PdgfrlQ6PE55 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.54■■■□□ 2.32
PdgfrlQ6PE55 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PdgfrlQ6PE55 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.52■■■□□ 2.32
PdgfrlQ6PE55 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms