RNA–Protein interactions for RNA: snR4

snR4, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeastyeast

Gene snR4, Length 186 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR4snR4 RPR2P40571 144 aa5.99□□□□□ -1.45
snR4snR4 YOR011W-AQ3E807 68 aa5.99□□□□□ -1.45
snR4snR4 RPS28BP0C0X0 67 aaKnown RBP5.98□□□□□ -1.45
snR4snR4 YJR107C-AP0CT86 78 aa5.98□□□□□ -1.45
snR4snR4 YER135CP40082 130 aa5.98□□□□□ -1.45
snR4snR4 IRC21Q04772 201 aa5.98□□□□□ -1.45
snR4snR4 COX17Q12287 69 aa5.98□□□□□ -1.45
snR4snR4 RPS28AQ3E7X9 67 aaPredicted RBP5.98□□□□□ -1.45
snR4snR4 IRA2P19158 3079 aa5.98□□□□□ -1.45
snR4snR4 COX14P39103 70 aa5.97□□□□□ -1.45
snR4snR4 YER187WP40102 141 aa5.97□□□□□ -1.45
snR4snR4 YOR034C-AQ3E735 80 aa5.97□□□□□ -1.45
snR4snR4 MIG3P39943 394 aa5.96□□□□□ -1.46
snR4snR4 YMR244WQ04018 355 aa5.96□□□□□ -1.46
snR4snR4 YDR246W-AQ3E763 66 aa5.96□□□□□ -1.46
snR4snR4 YMR175W-AQ3E766 64 aa5.96□□□□□ -1.46
snR4snR4 YLR285C-AQ3E771 56 aa5.96□□□□□ -1.46
snR4snR4 RTG1P32607 177 aa5.95□□□□□ -1.46
snR4snR4 YFR035CP43608 114 aa5.95□□□□□ -1.46
snR4snR4 YMR295CQ03559 197 aa5.95□□□□□ -1.46
snR4snR4 MRPS8Q03799 155 aa5.95□□□□□ -1.46
snR4snR4 KTI11Q3E840 82 aa5.95□□□□□ -1.46
snR4snR4 GAT4P40569 121 aa5.94□□□□□ -1.46
snR4snR4 PMP3P87284 55 aa5.94□□□□□ -1.46
snR4snR4 YLR156WP0CE96 114 aa5.93□□□□□ -1.46
snR4snR4 YLR159WP0CE97 114 aa5.93□□□□□ -1.46
snR4snR4 YLR161WP0CE98 114 aa5.93□□□□□ -1.46
snR4snR4 TOS8P53147 276 aa5.93□□□□□ -1.46
snR4snR4 ATP18P81450 59 aa5.93□□□□□ -1.46
snR4snR4 YLL006W-AQ3E814 58 aa5.93□□□□□ -1.46
snR4snR4 YBR219CP38317 127 aa5.92□□□□□ -1.46
snR4snR4 VAM10Q08474 114 aa5.92□□□□□ -1.46
snR4snR4 AIR2Q12476 344 aaKnown RBP5.91□□□□□ -1.46
snR4snR4 FMP27Q06179 2628 aa5.91□□□□□ -1.46
snR4snR4 ALG13P53178 202 aa5.9□□□□□ -1.46
snR4snR4 RSM19P53733 91 aaPredicted RBP5.9□□□□□ -1.46
snR4snR4 UBC4P15731 148 aa5.89□□□□□ -1.47
snR4snR4 MPC3P53311 146 aa5.89□□□□□ -1.47
snR4snR4 YLR281CQ05863 155 aa5.89□□□□□ -1.47
snR4snR4 YLR412C-AQ3E742 68 aa5.89□□□□□ -1.47
snR4snR4 BET1P22804 142 aa5.88□□□□□ -1.47
snR4snR4 YIR020CP40575 100 aa5.88□□□□□ -1.47
snR4snR4 EDC1P53080 175 aaPredicted RBP5.88□□□□□ -1.47
snR4snR4 HOR7Q05827 59 aa5.88□□□□□ -1.47
snR4snR4 ATP20Q12233 115 aa5.88□□□□□ -1.47
snR4snR4 RPL11AP0C0W9 174 aaKnown RBP5.87□□□□□ -1.47
snR4snR4 AIM4P38305 123 aaPredicted RBP5.87□□□□□ -1.47
snR4snR4 YGR164WP53291 111 aa5.87□□□□□ -1.47
snR4snR4 HAL1Q01766 294 aa5.87□□□□□ -1.47
snR4snR4 SRL1Q08673 210 aa5.87□□□□□ -1.47
snR4snR4 YRA2P36036 203 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
snR4snR4 ICY1Q04329 127 aa5.86□□□□□ -1.47
snR4snR4 YKL183C-AQ3E765 70 aa5.86□□□□□ -1.47
snR4snR4 KSH1Q8TGJ3 72 aa5.86□□□□□ -1.47
snR4snR4 YAL065CO13511 128 aa5.85□□□□□ -1.47
snR4snR4 ERG28P40030 148 aa5.85□□□□□ -1.47
snR4snR4 SPG4Q04438 115 aa5.85□□□□□ -1.47
snR4snR4 RPL11BQ3E757 174 aaPredicted RBP5.85□□□□□ -1.47
snR4snR4 TAR1Q8TGM6 124 aa5.85□□□□□ -1.47
snR4snR4 RPL29P05747 59 aaPredicted RBP5.84□□□□□ -1.47
snR4snR4 YFR009W-AP0C5M9 85 aa5.84□□□□□ -1.47
snR4snR4 RPS11AP0CX47 156 aaKnown RBP5.84□□□□□ -1.47
snR4snR4 RPS11BP0CX48 156 aaKnown RBP5.84□□□□□ -1.47
snR4snR4 SPS100P13130 326 aa5.84□□□□□ -1.47
snR4snR4 YPS5P53057 165 aa5.84□□□□□ -1.47
snR4snR4 YMR122W-AQ3E842 84 aa5.83□□□□□ -1.48
snR4snR4 YGL260WP53056 76 aa5.82□□□□□ -1.48
snR4snR4 TMC1Q08422 150 aaPredicted RBP5.82□□□□□ -1.48
snR4snR4 TDA8Q6B2U8 126 aa5.82□□□□□ -1.48
snR4snR4 ERI1P62651 68 aaKnown RBP5.81□□□□□ -1.48
snR4snR4 SAP30P38429 201 aa5.8□□□□□ -1.48
snR4snR4 YOR314WQ12506 109 aa5.8□□□□□ -1.48
snR4snR4 TSC3Q3E790 80 aa5.8□□□□□ -1.48
snR4snR4 RSM18P40033 138 aa5.79□□□□□ -1.48
snR4snR4 TDA2P40045 126 aa5.79□□□□□ -1.48
snR4snR4 RPL38P49167 78 aaKnown RBP5.79□□□□□ -1.48
snR4snR4 YPL278CQ08990 100 aa5.79□□□□□ -1.48
snR4snR4 YDL241WQ07738 123 aa5.78□□□□□ -1.48
snR4snR4 YDR182W-AQ3E796 67 aa5.78□□□□□ -1.48
snR4snR4 CRC1Q12289 327 aa5.77□□□□□ -1.49
snR4snR4 NOP10Q6Q547 58 aaPredicted RBP5.77□□□□□ -1.49
snR4snR4 YBR126W-AQ8TGU7 68 aa5.77□□□□□ -1.49
snR4snR4 YPR117WQ06116 2489 aa5.75□□□□□ -1.49
snR4snR4 RPL36BO14455 100 aaKnown RBP5.75□□□□□ -1.49
snR4snR4 RPL36AP05745 100 aaPredicted RBP5.75□□□□□ -1.49
snR4snR4 TIM10P87108 93 aa5.75□□□□□ -1.49
snR4snR4 SPO24Q3E752 67 aa5.75□□□□□ -1.49
snR4snR4 MVB12P42939 101 aa5.74□□□□□ -1.49
snR4snR4 YFL019CP43576 117 aa5.74□□□□□ -1.49
snR4snR4 YGR240C-AQ3E786 66 aa5.74□□□□□ -1.49
snR4snR4 YNL162W-AQ3E7A8 72 aa5.74□□□□□ -1.49
snR4snR4 IRA1P18963 3092 aa5.73□□□□□ -1.49
snR4snR4 YLR162WQ06235 118 aa5.72□□□□□ -1.49
snR4snR4 RDS3Q06835 107 aaPredicted RBP5.72□□□□□ -1.49
snR4snR4 YOL166W-AQ8TGJ1 51 aa5.72□□□□□ -1.49
snR4snR4 RPL26AP05743 127 aaKnown RBP5.71□□□□□ -1.5
snR4snR4 COX23P38824 151 aa5.71□□□□□ -1.5
snR4snR4 ICS3P47034 131 aa5.71□□□□□ -1.5
snR4snR4 RPL26BP53221 127 aaKnown RBP5.71□□□□□ -1.5
snR4snR4 YGR121W-AQ3E816 71 aa5.71□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms