RNA–Protein interactions for RNA: snR3

snR3, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR3, Length 194 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR3snR3 YHR214C-DP0CX93 97 aa2.29□□□□□ -2.04
snR3snR3 SEC16P48415 2195 aaKnown RBP2.28□□□□□ -2.04
snR3snR3 YRF1-2P40105 1681 aa2.28□□□□□ -2.05
snR3snR3 MLP1Q02455 1875 aaKnown RBP2.27□□□□□ -2.05
snR3snR3 YDR381C-AQ3E6R5 114 aa2.27□□□□□ -2.05
snR3snR3 YOR034C-AQ3E735 80 aa2.27□□□□□ -2.05
snR3snR3 MMS22Q06164 1454 aa2.26□□□□□ -2.05
snR3snR3 FPR2P32472 135 aa2.26□□□□□ -2.05
snR3snR3 YOR105WQ08504 108 aa2.26□□□□□ -2.05
snR3snR3 YDR010CQ12426 110 aa2.26□□□□□ -2.05
snR3snR3 YPR145C-AQ2V2P0 78 aa2.26□□□□□ -2.05
snR3snR3 YKL065W-AQ2V2P2 73 aa2.26□□□□□ -2.05
snR3snR3 RPL37AP49166 88 aaKnown RBP2.25□□□□□ -2.05
snR3snR3 YER188C-AP0C0V2 99 aa2.24□□□□□ -2.05
snR3snR3 PAU23Q07987 124 aa2.24□□□□□ -2.05
snR3snR3 PAU17Q12370 124 aa2.24□□□□□ -2.05
snR3snR3 YOR314WQ12506 109 aa2.24□□□□□ -2.05
snR3snR3 PDX3P38075 228 aaKnown RBP2.23□□□□□ -2.05
snR3snR3 YBR072C-AQ3E794 53 aa2.23□□□□□ -2.05
snR3snR3 YNL042W-BQ3E7Z2 85 aa2.23□□□□□ -2.05
snR3snR3 TY1B-BRQ12193 1756 aa2.22□□□□□ -2.05
snR3snR3 TY4B-HP0C2J7 1802 aa2.21□□□□□ -2.05
snR3snR3 YDR119W-AQ2V2P9 66 aa2.21□□□□□ -2.06
snR3snR3 TY1B-NL2Q99337 1749 aaKnown RBP2.21□□□□□ -2.06
snR3snR3 YHR173CP38864 112 aa2.2□□□□□ -2.06
snR3snR3 NUP159P40477 1460 aa2.2□□□□□ -2.06
snR3snR3 YAL065CO13511 128 aa2.19□□□□□ -2.06
snR3snR3 PAI3P01094 68 aa2.19□□□□□ -2.06
snR3snR3 RPL43AP0CX25 92 aaKnown RBP2.19□□□□□ -2.06
snR3snR3 RPL43BP0CX26 92 aa2.19□□□□□ -2.06
snR3snR3 SWM2P40342 146 aa2.19□□□□□ -2.06
snR3snR3 NOP10Q6Q547 58 aaPredicted RBP2.18□□□□□ -2.06
snR3snR3 YBR201C-AQ2V2Q3 67 aa2.17□□□□□ -2.06
snR3snR3 Q0032Q9ZZX7 96 aa2.17□□□□□ -2.06
snR3snR3 XRN1P22147 1528 aaKnown RBP2.16□□□□□ -2.06
snR3snR3 YMR122W-AQ3E842 84 aa2.15□□□□□ -2.07
snR3snR3 POL2P21951 2222 aaKnown RBP2.15□□□□□ -2.07
snR3snR3 YIL156W-BQ2V2P4 73 aa2.14□□□□□ -2.07
snR3snR3 COX7P10174 60 aa2.13□□□□□ -2.07
snR3snR3 QCR9P22289 66 aa2.12□□□□□ -2.07
snR3snR3 AUA1P32450 94 aa2.12□□□□□ -2.07
snR3snR3 URA2P07259 2214 aaKnown RBP2.11□□□□□ -2.07
snR3snR3 ATX1P38636 73 aa2.11□□□□□ -2.07
snR3snR3 SIN3P22579 1536 aa2.11□□□□□ -2.07
snR3snR3 ECM29P38737 1868 aa2.1□□□□□ -2.07
snR3snR3 ATP18P81450 59 aa2.1□□□□□ -2.07
snR3snR3 RPL38P49167 78 aaKnown RBP2.09□□□□□ -2.07
snR3snR3 RPL37BP51402 88 aaKnown RBP2.09□□□□□ -2.07
snR3snR3 YGR121W-AQ3E816 71 aa2.09□□□□□ -2.07
snR3snR3 YLR307C-AQ3E825 87 aa2.09□□□□□ -2.07
snR3snR3 DNF3Q12674 1656 aa2.09□□□□□ -2.08
snR3snR3 YLR157W-EP0CF00 54 aa2.08□□□□□ -2.08
snR3snR3 DOP1Q03921 1698 aa2.07□□□□□ -2.08
snR3snR3 MOT1P32333 1867 aa2.07□□□□□ -2.08
snR3snR3 YOL097W-AQ3E7Y9 61 aa2.06□□□□□ -2.08
snR3snR3 FAS2P19097 1887 aaKnown RBP2.05□□□□□ -2.08
snR3snR3 TIM12P32830 109 aa2.05□□□□□ -2.08
snR3snR3 RPC10P40422 70 aa2.05□□□□□ -2.08
snR3snR3 YFL041W-AQ3E817 63 aa2.05□□□□□ -2.08
snR3snR3 UFD4P33202 1483 aa2.05□□□□□ -2.08
snR3snR3 TY1B-BLQ12490 1755 aa2.05□□□□□ -2.08
snR3snR3 TY1B-LR3P0C2I6 1755 aaKnown RBP2.04□□□□□ -2.08
snR3snR3 TY1B-PR3P0C2J1 1755 aaKnown RBP2.04□□□□□ -2.08
snR3snR3 YNL198CP40166 100 aa2.04□□□□□ -2.08
snR3snR3 SGF11Q03067 99 aa2.04□□□□□ -2.08
snR3snR3 UTP10P42945 1769 aaKnown RBP2.03□□□□□ -2.08
snR3snR3 SDH6Q3E785 79 aa2.02□□□□□ -2.09
snR3snR3 RIM15P43565 1770 aa2.02□□□□□ -2.09
snR3snR3 YGR035W-AQ45U48 73 aa2.01□□□□□ -2.09
snR3snR3 YDL022C-AP0C5L6 82 aa2□□□□□ -2.09
snR3snR3 TCB3Q03640 1545 aaKnown RBP2□□□□□ -2.09
snR3snR3 TY1B-DR1Q03855 1755 aa2□□□□□ -2.09
snR3snR3 TY1B-DR3Q99231 1755 aa2□□□□□ -2.09
snR3snR3 YJR107C-AP0CT86 78 aa1.99□□□□□ -2.09
snR3snR3 SSS1P35179 80 aa1.99□□□□□ -2.09
snR3snR3 SCC2Q04002 1493 aa1.99□□□□□ -2.09
snR3snR3 PAU7P39545 55 aa1.97□□□□□ -2.09
snR3snR3 TY2B-CP25384 1770 aa1.97□□□□□ -2.09
snR3snR3 TY2B-DR1Q12472 1770 aa1.97□□□□□ -2.09
snR3snR3 STT4P37297 1900 aa1.97□□□□□ -2.09
snR3snR3 TY1B-DR6P0C2I3 1755 aa1.96□□□□□ -2.1
snR3snR3 TY1B-LR2P0C2I5 1755 aa1.96□□□□□ -2.1
snR3snR3 TY1B-JR2P47100 1755 aaKnown RBP1.96□□□□□ -2.1
snR3snR3 TY1B-MR1Q04214 1755 aa1.96□□□□□ -2.1
snR3snR3 TY1B-MR2Q04670 1755 aaKnown RBP1.96□□□□□ -2.1
snR3snR3 TY1B-NL1Q12112 1755 aa1.96□□□□□ -2.1
snR3snR3 TY1B-GR1Q12141 1755 aa1.96□□□□□ -2.1
snR3snR3 TY1B-GR3Q12316 1755 aa1.96□□□□□ -2.1
snR3snR3 TY1B-PLQ12414 1755 aaKnown RBP1.96□□□□□ -2.1
snR3snR3 TY1B-ORQ92393 1755 aa1.96□□□□□ -2.1
snR3snR3 YNL190WP53872 204 aa1.96□□□□□ -2.1
snR3snR3 YOL164W-AQ3E7A5 60 aa1.96□□□□□ -2.1
snR3snR3 YPR108W-AQ3E7B3 70 aa1.96□□□□□ -2.1
snR3snR3 SPI1P40092 148 aa1.95□□□□□ -2.1
snR3snR3 ATP17Q06405 101 aa1.95□□□□□ -2.1
snR3snR3 BLM10P43583 2143 aa1.94□□□□□ -2.1
snR3snR3 YBR032WP38223 100 aa1.93□□□□□ -2.1
snR3snR3 ERI1P62651 68 aaKnown RBP1.9□□□□□ -2.11
snR3snR3 YOL131WQ08270 108 aa1.9□□□□□ -2.11
snR3snR3 YKL018C-AQ3E7A7 99 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 2353.1 ms