RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeastyeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USV1YPL230W FPR2P32472 135 aa1.45□□□□□ -2.18
USV1YPL230W RPA12P32529 125 aaKnown RBP1.45□□□□□ -2.18
USV1YPL230W PAU23Q07987 124 aa1.45□□□□□ -2.18
USV1YPL230W PAU17Q12370 124 aa1.45□□□□□ -2.18
USV1YPL230W YDR010CQ12426 110 aa1.45□□□□□ -2.18
USV1YPL230W YOR343CQ12484 108 aa1.44□□□□□ -2.18
USV1YPL230W POL1P13382 1468 aa1.43□□□□□ -2.18
USV1YPL230W YNL042W-BQ3E7Z2 85 aa1.43□□□□□ -2.18
USV1YPL230W YSP2Q06681 1438 aa1.42□□□□□ -2.18
USV1YPL230W YHR214C-DP0CX93 97 aa1.42□□□□□ -2.18
USV1YPL230W YRF1-1P0CX20 1796 aa1.42□□□□□ -2.18
USV1YPL230W YRF1-5P0CX21 1796 aa1.42□□□□□ -2.18
USV1YPL230W YRF1-8P0CX22 1796 aa1.42□□□□□ -2.18
USV1YPL230W RPC10P40422 70 aa1.41□□□□□ -2.18
USV1YPL230W YOR105WQ08504 108 aa1.41□□□□□ -2.18
USV1YPL230W YBR201C-AQ2V2Q3 67 aa1.41□□□□□ -2.18
USV1YPL230W YOL164W-AQ3E7A5 60 aa1.41□□□□□ -2.18
USV1YPL230W Q0032Q9ZZX7 96 aa1.41□□□□□ -2.18
USV1YPL230W BLM10P43583 2143 aa1.4□□□□□ -2.18
USV1YPL230W PDX3P38075 228 aaKnown RBP1.4□□□□□ -2.19
USV1YPL230W YAL065CO13511 128 aa1.39□□□□□ -2.19
USV1YPL230W TOM6P33448 61 aa1.39□□□□□ -2.19
USV1YPL230W POC4Q12245 148 aaPredicted RBP1.39□□□□□ -2.19
USV1YPL230W YPR145C-AQ2V2P0 78 aa1.38□□□□□ -2.19
USV1YPL230W NTE1Q04958 1679 aa1.38□□□□□ -2.19
USV1YPL230W RPL38P49167 78 aaKnown RBP1.37□□□□□ -2.19
USV1YPL230W YJR107C-AP0CT86 78 aa1.36□□□□□ -2.19
USV1YPL230W YMR122W-AQ3E842 84 aa1.36□□□□□ -2.19
USV1YPL230W COX7P10174 60 aa1.35□□□□□ -2.19
USV1YPL230W NOP10Q6Q547 58 aaPredicted RBP1.35□□□□□ -2.19
USV1YPL230W ESC1Q03661 1658 aaKnown RBP1.35□□□□□ -2.19
USV1YPL230W PRP8P33334 2413 aaKnown RBP1.35□□□□□ -2.19
USV1YPL230W YKL065W-AQ2V2P2 73 aa1.34□□□□□ -2.19
USV1YPL230W LSM2P38203 95 aaKnown RBP1.33□□□□□ -2.2
USV1YPL230W YNL198CP40166 100 aa1.33□□□□□ -2.2
USV1YPL230W ATP18P81450 59 aa1.33□□□□□ -2.2
USV1YPL230W YDR381C-AQ3E6R5 114 aa1.33□□□□□ -2.2
USV1YPL230W YOR314WQ12506 109 aa1.32□□□□□ -2.2
USV1YPL230W YNL190WP53872 204 aa1.31□□□□□ -2.2
USV1YPL230W YIL156W-BQ2V2P4 73 aa1.31□□□□□ -2.2
USV1YPL230W SDH6Q3E785 79 aa1.3□□□□□ -2.2
USV1YPL230W YHR213W-AQ8TGT4 77 aa1.3□□□□□ -2.2
USV1YPL230W SWM2P40342 146 aa1.28□□□□□ -2.2
USV1YPL230W SGF11Q03067 99 aa1.27□□□□□ -2.21
USV1YPL230W BPH1P25356 2167 aa1.26□□□□□ -2.21
USV1YPL230W YOL097W-AQ3E7Y9 61 aa1.26□□□□□ -2.21
USV1YPL230W QCR9P22289 66 aa1.24□□□□□ -2.21
USV1YPL230W YDR119W-AQ2V2P9 66 aa1.24□□□□□ -2.21
USV1YPL230W YPR108W-AQ3E7B3 70 aa1.24□□□□□ -2.21
USV1YPL230W MLP1Q02455 1875 aaKnown RBP1.24□□□□□ -2.21
USV1YPL230W MMS22Q06164 1454 aa1.24□□□□□ -2.21
USV1YPL230W TY1B-BLQ12490 1755 aa1.23□□□□□ -2.21
USV1YPL230W SNF2P22082 1703 aa1.23□□□□□ -2.21
USV1YPL230W YRF1-2P40105 1681 aa1.23□□□□□ -2.21
USV1YPL230W FAS2P19097 1887 aaKnown RBP1.22□□□□□ -2.21
USV1YPL230W RIM15P43565 1770 aa1.22□□□□□ -2.21
USV1YPL230W YIL134C-AQ45U18 67 aa1.22□□□□□ -2.21
USV1YPL230W PAI3P01094 68 aa1.21□□□□□ -2.22
USV1YPL230W TIM12P32830 109 aa1.21□□□□□ -2.22
USV1YPL230W RPS29BP41058 56 aaKnown RBP1.21□□□□□ -2.22
USV1YPL230W ECM29P38737 1868 aa1.2□□□□□ -2.22
USV1YPL230W YBR032WP38223 100 aa1.2□□□□□ -2.22
USV1YPL230W YDL022C-AP0C5L6 82 aa1.19□□□□□ -2.22
USV1YPL230W YFR009W-AP0C5M9 85 aa1.19□□□□□ -2.22
USV1YPL230W YGR121W-AQ3E816 71 aa1.19□□□□□ -2.22
USV1YPL230W ATX1P38636 73 aa1.18□□□□□ -2.22
USV1YPL230W STT4P37297 1900 aa1.17□□□□□ -2.22
USV1YPL230W DNF3Q12674 1656 aa1.16□□□□□ -2.22
USV1YPL230W YGR035W-AQ45U48 73 aa1.15□□□□□ -2.23
USV1YPL230W YBR016WP38216 128 aa1.14□□□□□ -2.23
USV1YPL230W PAU7P39545 55 aa1.14□□□□□ -2.23
USV1YPL230W ATP17Q06405 101 aa1.14□□□□□ -2.23
USV1YPL230W YKL018C-AQ3E7A7 99 aa1.14□□□□□ -2.23
USV1YPL230W ESP1Q03018 1630 aa1.14□□□□□ -2.23
USV1YPL230W MOT1P32333 1867 aa1.14□□□□□ -2.23
USV1YPL230W TY1B-BRQ12193 1756 aa1.12□□□□□ -2.23
USV1YPL230W EDC1P53080 175 aaPredicted RBP1.12□□□□□ -2.23
USV1YPL230W YLR146W-AQ2V2P1 62 aa1.12□□□□□ -2.23
USV1YPL230W XRN1P22147 1528 aaKnown RBP1.11□□□□□ -2.23
USV1YPL230W SIN3P22579 1536 aa1.11□□□□□ -2.23
USV1YPL230W YFL041W-AQ3E817 63 aa1.11□□□□□ -2.23
USV1YPL230W UTP10P42945 1769 aaKnown RBP1.11□□□□□ -2.23
USV1YPL230W SSS1P35179 80 aa1.1□□□□□ -2.23
USV1YPL230W YOR032W-AQ8TGS1 66 aa1.1□□□□□ -2.23
USV1YPL230W NUP159P40477 1460 aa1.1□□□□□ -2.23
USV1YPL230W TY1B-PR2P0C2J0 1756 aa1.09□□□□□ -2.23
USV1YPL230W TY1B-LR3P0C2I6 1755 aaKnown RBP1.08□□□□□ -2.24
USV1YPL230W TY1B-PR3P0C2J1 1755 aaKnown RBP1.08□□□□□ -2.24
USV1YPL230W UFD4P33202 1483 aa1.08□□□□□ -2.24
USV1YPL230W TAO3P40468 2376 aa1.07□□□□□ -2.24
USV1YPL230W SPI1P40092 148 aa1.05□□□□□ -2.24
USV1YPL230W ERI1P62651 68 aaKnown RBP1.05□□□□□ -2.24
USV1YPL230W SEN1Q00416 2231 aaKnown RBP1.04□□□□□ -2.24
USV1YPL230W TY2B-CP25384 1770 aa1.04□□□□□ -2.24
USV1YPL230W TY2B-DR1Q12472 1770 aa1.04□□□□□ -2.24
USV1YPL230W TY1B-DR6P0C2I3 1755 aa1.03□□□□□ -2.24
USV1YPL230W TY1B-LR2P0C2I5 1755 aa1.03□□□□□ -2.24
USV1YPL230W TY1B-JR2P47100 1755 aaKnown RBP1.03□□□□□ -2.24
USV1YPL230W TY1B-MR1Q04214 1755 aa1.03□□□□□ -2.24
USV1YPL230W TY1B-MR2Q04670 1755 aaKnown RBP1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms