RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W RSM19P53733 91 aaPredicted RBP1.22□□□□□ -2.21
UBP16YPL072W MIX14Q04341 121 aa1.22□□□□□ -2.21
UBP16YPL072W COA4Q05809 96 aa1.22□□□□□ -2.21
UBP16YPL072W PAU16P35994 123 aa1.21□□□□□ -2.22
UBP16YPL072W SRX1P36077 127 aa1.21□□□□□ -2.22
UBP16YPL072W LSM2P38203 95 aaKnown RBP1.21□□□□□ -2.22
UBP16YPL072W PAU15P40585 124 aa1.21□□□□□ -2.22
UBP16YPL072W LST8P41318 303 aa1.21□□□□□ -2.22
UBP16YPL072W YJL009WP47078 108 aa1.21□□□□□ -2.22
UBP16YPL072W YNL122CP53921 115 aaPredicted RBP1.21□□□□□ -2.22
UBP16YPL072W YIL014C-AQ02598 104 aa1.21□□□□□ -2.22
UBP16YPL072W YLR194CQ05777 254 aa1.21□□□□□ -2.22
UBP16YPL072W YOR072WQ08486 104 aa1.21□□□□□ -2.22
UBP16YPL072W YLR363W-AQ3E747 85 aa1.21□□□□□ -2.22
UBP16YPL072W RTC6O14464 93 aa1.2□□□□□ -2.22
UBP16YPL072W GCV3P39726 170 aaPredicted RBP1.2□□□□□ -2.22
UBP16YPL072W YMR122CQ03879 124 aa1.2□□□□□ -2.22
UBP16YPL072W YMR082CQ04276 118 aa1.2□□□□□ -2.22
UBP16YPL072W UBR1P19812 1950 aa1.2□□□□□ -2.22
UBP16YPL072W HMRA2P0CY13 119 aa1.2□□□□□ -2.22
UBP16YPL072W COX23P38824 151 aa1.2□□□□□ -2.22
UBP16YPL072W HUA1P40325 198 aa1.2□□□□□ -2.22
UBP16YPL072W YDR042CQ03205 200 aa1.2□□□□□ -2.22
UBP16YPL072W RRT15Q3E811 62 aa1.2□□□□□ -2.22
UBP16YPL072W LAA1P39526 2014 aa1.19□□□□□ -2.22
UBP16YPL072W CCW12Q12127 133 aa1.19□□□□□ -2.22
UBP16YPL072W CYR1P08678 2026 aaKnown RBP1.18□□□□□ -2.22
UBP16YPL072W ACC1Q00955 2233 aaKnown RBP1.18□□□□□ -2.22
UBP16YPL072W MOT1P32333 1867 aa1.18□□□□□ -2.22
UBP16YPL072W ECM29P38737 1868 aa1.18□□□□□ -2.22
UBP16YPL072W RIF1P29539 1916 aa1.18□□□□□ -2.22
UBP16YPL072W YJL197C-AP0C5P0 93 aa1.18□□□□□ -2.22
UBP16YPL072W YCR001WP25347 104 aa1.18□□□□□ -2.22
UBP16YPL072W TIM12P32830 109 aa1.18□□□□□ -2.22
UBP16YPL072W YHL005CP38752 130 aa1.18□□□□□ -2.22
UBP16YPL072W RSM18P40033 138 aa1.18□□□□□ -2.22
UBP16YPL072W PAU5P43575 122 aa1.18□□□□□ -2.22
UBP16YPL072W YHR213W-AQ8TGT4 77 aa1.18□□□□□ -2.22
UBP16YPL072W ENV10Q99382 181 aa1.18□□□□□ -2.22
UBP16YPL072W COX9P07255 59 aa1.17□□□□□ -2.22
UBP16YPL072W RPS22AP0C0W1 130 aaKnown RBP1.17□□□□□ -2.22
UBP16YPL072W YCR085WP25650 117 aa1.17□□□□□ -2.22
UBP16YPL072W SWM2P40342 146 aa1.17□□□□□ -2.22
UBP16YPL072W POR2P40478 281 aa1.17□□□□□ -2.22
UBP16YPL072W YIR020CP40575 100 aa1.17□□□□□ -2.22
UBP16YPL072W NCE101Q02820 53 aa1.17□□□□□ -2.22
UBP16YPL072W LSM6Q06406 86 aaKnown RBP1.17□□□□□ -2.22
UBP16YPL072W YLR285C-AQ3E771 56 aa1.17□□□□□ -2.22
UBP16YPL072W PAI3P01094 68 aa1.16□□□□□ -2.22
UBP16YPL072W MRP17P28778 131 aa1.16□□□□□ -2.22
UBP16YPL072W RPA12P32529 125 aaKnown RBP1.16□□□□□ -2.22
UBP16YPL072W RPS27AP35997 82 aaKnown RBP1.16□□□□□ -2.22
UBP16YPL072W RPS27BP38711 82 aa1.16□□□□□ -2.22
UBP16YPL072W SNA2P56508 79 aa1.16□□□□□ -2.22
UBP16YPL072W ICY1Q04329 127 aa1.16□□□□□ -2.22
UBP16YPL072W PRM3Q08931 133 aa1.16□□□□□ -2.22
UBP16YPL072W YCR095W-AQ3E787 52 aa1.16□□□□□ -2.22
UBP16YPL072W RPS22BQ3E7Y3 130 aaKnown RBP1.16□□□□□ -2.22
UBP16YPL072W YSF3P0C074 85 aaPredicted RBP1.15□□□□□ -2.22
UBP16YPL072W ROX3P25046 220 aa1.15□□□□□ -2.22
UBP16YPL072W NHP2P32495 156 aaPredicted RBP1.15□□□□□ -2.22
UBP16YPL072W AIM4P38305 123 aaPredicted RBP1.15□□□□□ -2.22
UBP16YPL072W YIL163CP40448 117 aa1.15□□□□□ -2.22
UBP16YPL072W IMP2P46972 177 aa1.15□□□□□ -2.22
UBP16YPL072W ICS3P47034 131 aa1.15□□□□□ -2.22
UBP16YPL072W MGR2Q02889 113 aa1.15□□□□□ -2.22
UBP16YPL072W YOL118CQ08259 102 aa1.15□□□□□ -2.22
UBP16YPL072W YOR343CQ12484 108 aa1.15□□□□□ -2.22
UBP16YPL072W YDR034W-BQ6Q5X2 51 aa1.15□□□□□ -2.22
UBP16YPL072W TAO3P40468 2376 aa1.15□□□□□ -2.22
UBP16YPL072W YOL013W-AP0C272 63 aaPredicted RBP1.15□□□□□ -2.23
UBP16YPL072W TOM6P33448 61 aa1.15□□□□□ -2.23
UBP16YPL072W SPC1P46965 94 aa1.15□□□□□ -2.23
UBP16YPL072W YLR146W-AQ2V2P1 62 aa1.15□□□□□ -2.23
UBP16YPL072W TOM1Q03280 3268 aa1.14□□□□□ -2.23
UBP16YPL072W YHR214C-DP0CX93 97 aa1.14□□□□□ -2.23
UBP16YPL072W ATX1P38636 73 aa1.14□□□□□ -2.23
UBP16YPL072W YIL086CP40503 102 aa1.14□□□□□ -2.23
UBP16YPL072W POC4Q12245 148 aaPredicted RBP1.14□□□□□ -2.23
UBP16YPL072W YCL048W-AQ2V2Q2 79 aa1.14□□□□□ -2.23
UBP16YPL072W YMR175W-AQ3E766 64 aa1.14□□□□□ -2.23
UBP16YPL072W RPL37AP49166 88 aaKnown RBP1.13□□□□□ -2.23
UBP16YPL072W LCL2Q08045 131 aa1.13□□□□□ -2.23
UBP16YPL072W YGL041C-BQ3E750 60 aa1.13□□□□□ -2.23
UBP16YPL072W PAU6P0CE90 120 aa1.12□□□□□ -2.23
UBP16YPL072W PAU18P0CE91 120 aa1.12□□□□□ -2.23
UBP16YPL072W YBR013CP38215 129 aa1.12□□□□□ -2.23
UBP16YPL072W VPS55P47111 140 aa1.12□□□□□ -2.23
UBP16YPL072W VMA9Q3E7B6 73 aa1.12□□□□□ -2.23
UBP16YPL072W YIL046W-AQ3E7Z4 54 aa1.12□□□□□ -2.23
UBP16YPL072W YOR032W-AQ8TGS1 66 aa1.12□□□□□ -2.23
UBP16YPL072W STT4P37297 1900 aa1.11□□□□□ -2.23
UBP16YPL072W YFR010W-AP0C5N0 62 aa1.11□□□□□ -2.23
UBP16YPL072W PAU1P0CE88 120 aa1.11□□□□□ -2.23
UBP16YPL072W PAU14P0CE89 120 aa1.11□□□□□ -2.23
UBP16YPL072W PAU8P0CE92 120 aa1.11□□□□□ -2.23
UBP16YPL072W PAU11P0CE93 120 aa1.11□□□□□ -2.23
UBP16YPL072W SSS1P35179 80 aa1.11□□□□□ -2.23
UBP16YPL072W YBL071CP38185 102 aa1.11□□□□□ -2.23
UBP16YPL072W YBR292CP38357 123 aa1.11□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 23 ms