RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W MMS1Q06211 1407 aa-1.13□□□□□ -2.59
SGF11YPL047W YBR090CP38253 122 aa-1.13□□□□□ -2.59
SGF11YPL047W EMC5P40540 141 aa-1.13□□□□□ -2.59
SGF11YPL047W RSM19P53733 91 aaPredicted RBP-1.13□□□□□ -2.59
SGF11YPL047W YMR122W-AQ3E842 84 aa-1.13□□□□□ -2.59
SGF11YPL047W BPT1P14772 1559 aa-1.13□□□□□ -2.59
SGF11YPL047W DNF3Q12674 1656 aa-1.13□□□□□ -2.59
SGF11YPL047W WIP1Q2V2P8 89 aa-1.14□□□□□ -2.59
SGF11YPL047W YPR108W-AQ3E7B3 70 aa-1.14□□□□□ -2.59
SGF11YPL047W UBC4P15731 148 aa-1.15□□□□□ -2.59
SGF11YPL047W YCR085WP25650 117 aa-1.15□□□□□ -2.59
SGF11YPL047W TY1B-PR2P0C2J0 1756 aa-1.16□□□□□ -2.59
SGF11YPL047W YAL065CO13511 128 aa-1.16□□□□□ -2.6
SGF11YPL047W UBC5P15732 148 aa-1.16□□□□□ -2.6
SGF11YPL047W YBR032WP38223 100 aa-1.16□□□□□ -2.6
SGF11YPL047W BSC4P53841 131 aa-1.16□□□□□ -2.6
SGF11YPL047W YMR090WQ04304 227 aaKnown RBP-1.16□□□□□ -2.6
SGF11YPL047W YMR103CQ04436 120 aa-1.16□□□□□ -2.6
SGF11YPL047W YHL005CP38752 130 aa-1.17□□□□□ -2.6
SGF11YPL047W SNU13P39990 126 aaKnown RBP-1.17□□□□□ -2.6
SGF11YPL047W YER039C-AP0CD97 72 aa-1.18□□□□□ -2.6
SGF11YPL047W HMRA1P0CY11 126 aa-1.18□□□□□ -2.6
SGF11YPL047W YOR289WQ12012 251 aaPredicted RBP-1.18□□□□□ -2.6
SGF11YPL047W SPP41P38904 1435 aa-1.19□□□□□ -2.6
SGF11YPL047W FPR2P32472 135 aa-1.2□□□□□ -2.6
SGF11YPL047W YDR182W-AQ3E796 67 aa-1.21□□□□□ -2.6
SGF11YPL047W TY1B-DR5P0C2I2 1755 aa-1.21□□□□□ -2.6
SGF11YPL047W TY1B-DR6P0C2I3 1755 aa-1.21□□□□□ -2.6
SGF11YPL047W TY1B-LR2P0C2I5 1755 aa-1.21□□□□□ -2.6
SGF11YPL047W TY1B-PR1P0C2I9 1755 aaKnown RBP-1.21□□□□□ -2.6
SGF11YPL047W TY1B-JR1P47098 1755 aa-1.21□□□□□ -2.6
SGF11YPL047W TY1B-JR2P47100 1755 aaKnown RBP-1.21□□□□□ -2.6
SGF11YPL047W TY1B-ML2Q03434 1755 aaKnown RBP-1.21□□□□□ -2.6
SGF11YPL047W TY1B-ER1Q03612 1755 aa-1.21□□□□□ -2.6
SGF11YPL047W TY1B-DR1Q03855 1755 aa-1.21□□□□□ -2.6
SGF11YPL047W TY1B-MR2Q04670 1755 aaKnown RBP-1.21□□□□□ -2.6
SGF11YPL047W TY1B-ML1Q04711 1755 aaKnown RBP-1.21□□□□□ -2.6
SGF11YPL047W TY1B-GR1Q12141 1755 aa-1.21□□□□□ -2.6
SGF11YPL047W TY1B-GR2Q12269 1755 aa-1.21□□□□□ -2.6
SGF11YPL047W TY1B-OLQ12273 1755 aa-1.21□□□□□ -2.6
SGF11YPL047W TY1B-PLQ12414 1755 aaKnown RBP-1.21□□□□□ -2.6
SGF11YPL047W TY1B-ORQ92393 1755 aa-1.21□□□□□ -2.6
SGF11YPL047W TY1B-DR3Q99231 1755 aa-1.21□□□□□ -2.6
SGF11YPL047W YHR050W-AQ05451 56 aa-1.22□□□□□ -2.6
SGF11YPL047W TY1B-MR1Q04214 1755 aa-1.22□□□□□ -2.6
SGF11YPL047W TY1B-NL1Q12112 1755 aa-1.22□□□□□ -2.6
SGF11YPL047W TY1B-GR3Q12316 1755 aa-1.22□□□□□ -2.6
SGF11YPL047W STT4P37297 1900 aa-1.23□□□□□ -2.61
SGF11YPL047W YOR304C-AO14468 76 aa-1.23□□□□□ -2.61
SGF11YPL047W YOR008C-AQ3E7B9 74 aa-1.23□□□□□ -2.61
SGF11YPL047W PAU23Q07987 124 aa-1.24□□□□□ -2.61
SGF11YPL047W FYV7Q12247 151 aa-1.24□□□□□ -2.61
SGF11YPL047W PAU17Q12370 124 aa-1.24□□□□□ -2.61
SGF11YPL047W TY3B-IQ7LHG5 1498 aaKnown RBP-1.24□□□□□ -2.61
SGF11YPL047W FMP27Q06179 2628 aa-1.25□□□□□ -2.61
SGF11YPL047W LHP1P33399 275 aaKnown RBP-1.25□□□□□ -2.61
SGF11YPL047W YKL018C-AQ3E7A7 99 aa-1.25□□□□□ -2.61
SGF11YPL047W MHF2Q3E829 80 aa-1.25□□□□□ -2.61
SGF11YPL047W YOL097W-AQ3E7Y9 61 aa-1.26□□□□□ -2.61
SGF11YPL047W RRT15Q3E811 62 aa-1.26□□□□□ -2.61
SGF11YPL047W NHP2P32495 156 aaPredicted RBP-1.27□□□□□ -2.61
SGF11YPL047W SIP18P50263 79 aa-1.28□□□□□ -2.61
SGF11YPL047W YDR029WQ12111 104 aa-1.28□□□□□ -2.61
SGF11YPL047W KSH1Q8TGJ3 72 aa-1.28□□□□□ -2.61
SGF11YPL047W TY2B-LR1P0C2J3 1770 aa-1.29□□□□□ -2.62
SGF11YPL047W TY2B-FP0CX63 1770 aa-1.29□□□□□ -2.62
SGF11YPL047W TY2B-GR2P0CX64 1770 aa-1.29□□□□□ -2.62
SGF11YPL047W TY2B-CP25384 1770 aa-1.29□□□□□ -2.62
SGF11YPL047W TY2B-DR2Q03494 1770 aa-1.29□□□□□ -2.62
SGF11YPL047W TY1B-ER2Q03619 1755 aa-1.29□□□□□ -2.62
SGF11YPL047W TY2B-DR3Q07791 1770 aaKnown RBP-1.29□□□□□ -2.62
SGF11YPL047W TY1B-LR1Q12088 1755 aaKnown RBP-1.29□□□□□ -2.62
SGF11YPL047W TY2B-OR1Q12113 1770 aa-1.29□□□□□ -2.62
SGF11YPL047W TY2B-DR1Q12472 1770 aa-1.29□□□□□ -2.62
SGF11YPL047W TY2B-BQ12491 1770 aa-1.29□□□□□ -2.62
SGF11YPL047W TY2B-OR2Q12501 1770 aa-1.29□□□□□ -2.62
SGF11YPL047W YKL068W-AQ3E826 78 aa-1.29□□□□□ -2.62
SGF11YPL047W ECM29P38737 1868 aa-1.3□□□□□ -2.62
SGF11YPL047W GEA1P47102 1408 aaPredicted RBP-1.31□□□□□ -2.62
SGF11YPL047W YPR117WQ06116 2489 aa-1.31□□□□□ -2.62
SGF11YPL047W TOR2P32600 2474 aaKnown RBP-1.31□□□□□ -2.62
SGF11YPL047W RPS12P48589 143 aaKnown RBP-1.32□□□□□ -2.62
SGF11YPL047W MOT1P32333 1867 aa-1.33□□□□□ -2.62
SGF11YPL047W SUS1Q6WNK7 96 aa-1.33□□□□□ -2.62
SGF11YPL047W MSL1P40567 111 aaPredicted RBP-1.34□□□□□ -2.62
SGF11YPL047W TY1B-NL2Q99337 1749 aaKnown RBP-1.35□□□□□ -2.62
SGF11YPL047W VTH1P40438 1549 aa-1.35□□□□□ -2.62
SGF11YPL047W VTH2P40890 1549 aa-1.35□□□□□ -2.62
SGF11YPL047W SPO14P36126 1683 aa-1.35□□□□□ -2.63
SGF11YPL047W TOS6P48560 102 aa-1.35□□□□□ -2.63
SGF11YPL047W NOP10Q6Q547 58 aaPredicted RBP-1.35□□□□□ -2.63
SGF11YPL047W PDR11P40550 1411 aa-1.35□□□□□ -2.63
SGF11YPL047W OLI1P61829 76 aa-1.36□□□□□ -2.63
SGF11YPL047W POL1P13382 1468 aa-1.37□□□□□ -2.63
SGF11YPL047W TSC11P40061 1430 aa-1.37□□□□□ -2.63
SGF11YPL047W GEA2P39993 1459 aaKnown RBP-1.37□□□□□ -2.63
SGF11YPL047W YER137CP40083 148 aaKnown RBP-1.38□□□□□ -2.63
SGF11YPL047W SCP1Q08873 200 aa-1.38□□□□□ -2.63
SGF11YPL047W REV3P14284 1504 aa-1.39□□□□□ -2.63
SGF11YPL047W YDR042CQ03205 200 aa-1.39□□□□□ -2.63
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms