RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeastyeast

Gene VAM10, Length 345 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM10YOR068C RPL33BP41056 107 aaKnown RBP2.37□□□□□ -2.03
VAM10YOR068C YNR077CP53758 84 aa2.37□□□□□ -2.03
VAM10YOR068C COX19Q3E731 98 aa2.37□□□□□ -2.03
VAM10YOR068C CYR1P08678 2026 aaKnown RBP2.37□□□□□ -2.03
VAM10YOR068C IML1P47170 1584 aa2.36□□□□□ -2.03
VAM10YOR068C YRF1-1P0CX20 1796 aa2.36□□□□□ -2.03
VAM10YOR068C YRF1-5P0CX21 1796 aa2.36□□□□□ -2.03
VAM10YOR068C YRF1-8P0CX22 1796 aa2.36□□□□□ -2.03
VAM10YOR068C QCR8P08525 94 aa2.36□□□□□ -2.03
VAM10YOR068C YER188C-AP0C0V2 99 aa2.36□□□□□ -2.03
VAM10YOR068C RPS22AP0C0W1 130 aaKnown RBP2.36□□□□□ -2.03
VAM10YOR068C RPS23AP0CX29 145 aaKnown RBP2.36□□□□□ -2.03
VAM10YOR068C RPS23BP0CX30 145 aa2.36□□□□□ -2.03
VAM10YOR068C TIM12P32830 109 aa2.36□□□□□ -2.03
VAM10YOR068C YBR032WP38223 100 aa2.36□□□□□ -2.03
VAM10YOR068C YHR022CP38763 256 aa2.36□□□□□ -2.03
VAM10YOR068C POR2P40478 281 aa2.36□□□□□ -2.03
VAM10YOR068C AIM19P40502 157 aa2.36□□□□□ -2.03
VAM10YOR068C YLR194CQ05777 254 aa2.36□□□□□ -2.03
VAM10YOR068C YLR162WQ06235 118 aa2.36□□□□□ -2.03
VAM10YOR068C YMR030W-AQ3E760 96 aa2.36□□□□□ -2.03
VAM10YOR068C ATG2P53855 1592 aa2.36□□□□□ -2.03
VAM10YOR068C QCR9P22289 66 aa2.35□□□□□ -2.03
VAM10YOR068C FPR2P32472 135 aa2.35□□□□□ -2.03
VAM10YOR068C YBR027CP38220 110 aa2.35□□□□□ -2.03
VAM10YOR068C YHR173CP38864 112 aa2.35□□□□□ -2.03
VAM10YOR068C YEL014CP39999 101 aa2.35□□□□□ -2.03
VAM10YOR068C IRC21Q04772 201 aa2.35□□□□□ -2.03
VAM10YOR068C YMR321CQ04898 105 aa2.35□□□□□ -2.03
VAM10YOR068C YPR195CQ06594 109 aa2.35□□□□□ -2.03
VAM10YOR068C YCL048W-AQ2V2Q2 79 aa2.35□□□□□ -2.03
VAM10YOR068C YCR095W-AQ3E787 52 aa2.35□□□□□ -2.03
VAM10YOR068C COA3Q3E7B2 85 aa2.35□□□□□ -2.03
VAM10YOR068C YGR121W-AQ3E816 71 aa2.35□□□□□ -2.03
VAM10YOR068C PFY1P07274 126 aa2.34□□□□□ -2.03
VAM10YOR068C VPS55P47111 140 aa2.34□□□□□ -2.03
VAM10YOR068C SNA2P56508 79 aa2.34□□□□□ -2.03
VAM10YOR068C YDR114CQ04597 100 aa2.34□□□□□ -2.03
VAM10YOR068C YDL012CQ12489 107 aa2.34□□□□□ -2.03
VAM10YOR068C RPS22BQ3E7Y3 130 aaKnown RBP2.34□□□□□ -2.03
VAM10YOR068C ARO1P08566 1588 aaKnown RBP2.34□□□□□ -2.03
VAM10YOR068C STT4P37297 1900 aa2.34□□□□□ -2.04
VAM10YOR068C MRPL38P35996 138 aaPredicted RBP2.33□□□□□ -2.04
VAM10YOR068C AIM4P38305 123 aaPredicted RBP2.33□□□□□ -2.04
VAM10YOR068C SED1Q01589 338 aa2.33□□□□□ -2.04
VAM10YOR068C PRM7Q12459 698 aa2.33□□□□□ -2.04
VAM10YOR068C SNF2P22082 1703 aa2.32□□□□□ -2.04
VAM10YOR068C COX8P04039 78 aa2.32□□□□□ -2.04
VAM10YOR068C PAU6P0CE90 120 aa2.32□□□□□ -2.04
VAM10YOR068C PAU18P0CE91 120 aa2.32□□□□□ -2.04
VAM10YOR068C PAU8P0CE92 120 aa2.32□□□□□ -2.04
VAM10YOR068C PAU11P0CE93 120 aa2.32□□□□□ -2.04
VAM10YOR068C PAU13P38725 120 aa2.32□□□□□ -2.04
VAM10YOR068C MPC2P38857 129 aa2.32□□□□□ -2.04
VAM10YOR068C PAU4P53427 120 aa2.32□□□□□ -2.04
VAM10YOR068C MRX7P53869 86 aa2.32□□□□□ -2.04
VAM10YOR068C DAD4P69851 72 aa2.32□□□□□ -2.04
VAM10YOR068C PAU10Q03050 120 aa2.32□□□□□ -2.04
VAM10YOR068C YMR122CQ03879 124 aa2.32□□□□□ -2.04
VAM10YOR068C YDR246W-AQ3E763 66 aa2.32□□□□□ -2.04
VAM10YOR068C PAU9Q3E770 120 aa2.32□□□□□ -2.04
VAM10YOR068C SLH1P53327 1967 aaKnown RBP2.31□□□□□ -2.04
VAM10YOR068C HMRA2P0CY13 119 aa2.31□□□□□ -2.04
VAM10YOR068C CMC4Q3E7A9 73 aa2.31□□□□□ -2.04
VAM10YOR068C SPC1P46965 94 aa2.3□□□□□ -2.04
VAM10YOR068C ERI1P62651 68 aaKnown RBP2.3□□□□□ -2.04
VAM10YOR068C MIX17Q03667 156 aa2.3□□□□□ -2.04
VAM10YOR068C VPS68Q12016 184 aa2.3□□□□□ -2.04
VAM10YOR068C YGR035W-AQ45U48 73 aa2.3□□□□□ -2.04
VAM10YOR068C PDR15Q04182 1529 aaKnown RBP2.3□□□□□ -2.04
VAM10YOR068C FAS1P07149 2051 aaKnown RBP2.3□□□□□ -2.04
VAM10YOR068C YJL027CP47063 138 aaPredicted RBP2.29□□□□□ -2.04
VAM10YOR068C BSC4P53841 131 aa2.29□□□□□ -2.04
VAM10YOR068C YDR182W-AQ3E796 67 aa2.29□□□□□ -2.04
VAM10YOR068C CCW14O13547 238 aa2.28□□□□□ -2.04
VAM10YOR068C PAU7P39545 55 aa2.28□□□□□ -2.04
VAM10YOR068C RPL26BP53221 127 aaKnown RBP2.28□□□□□ -2.04
VAM10YOR068C FIT2Q08906 153 aa2.28□□□□□ -2.04
VAM10YOR068C YLR285C-AQ3E771 56 aa2.28□□□□□ -2.04
VAM10YOR068C YBL071CP38185 102 aa2.27□□□□□ -2.05
VAM10YOR068C FPR1P20081 114 aaKnown RBP2.26□□□□□ -2.05
VAM10YOR068C YHR007C-AQ07074 71 aa2.26□□□□□ -2.05
VAM10YOR068C VMR1P38735 1592 aa2.25□□□□□ -2.05
VAM10YOR068C YDR010CQ12426 110 aa2.25□□□□□ -2.05
VAM10YOR068C DNF2Q12675 1612 aa2.24□□□□□ -2.05
VAM10YOR068C YPR096CO13587 100 aa2.24□□□□□ -2.05
VAM10YOR068C NOP10Q6Q547 58 aaPredicted RBP2.24□□□□□ -2.05
VAM10YOR068C NUP192P47054 1683 aa2.23□□□□□ -2.05
VAM10YOR068C YGL014C-AP0C5N1 53 aa2.23□□□□□ -2.05
VAM10YOR068C PAU1P0CE88 120 aa2.23□□□□□ -2.05
VAM10YOR068C PAU14P0CE89 120 aa2.23□□□□□ -2.05
VAM10YOR068C YIL163CP40448 117 aa2.23□□□□□ -2.05
VAM10YOR068C YJL144WP47009 104 aa2.23□□□□□ -2.05
VAM10YOR068C PAU20Q08322 120 aa2.23□□□□□ -2.05
VAM10YOR068C YIL156W-BQ2V2P4 73 aa2.23□□□□□ -2.05
VAM10YOR068C BUD3P25558 1636 aa2.23□□□□□ -2.05
VAM10YOR068C CDC39P25655 2108 aaKnown RBP2.23□□□□□ -2.05
VAM10YOR068C DSE2P38844 325 aa2.22□□□□□ -2.05
VAM10YOR068C VAM10Q08474 114 aa2.22□□□□□ -2.05
VAM10YOR068C URB1P34241 1764 aaKnown RBP2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms