RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W MSL1P40567 111 aaPredicted RBP2.22□□□□□ -2.05
VPS27YNR006W YLR285C-AQ3E771 56 aa2.22□□□□□ -2.05
VPS27YNR006W UBR2Q07963 1872 aa2.21□□□□□ -2.05
VPS27YNR006W PFY1P07274 126 aa2.21□□□□□ -2.06
VPS27YNR006W HMRA1P0CY11 126 aa2.21□□□□□ -2.06
VPS27YNR006W CYB5P40312 120 aa2.21□□□□□ -2.06
VPS27YNR006W COA4Q05809 96 aa2.21□□□□□ -2.06
VPS27YNR006W YPR203WQ08994 102 aa2.21□□□□□ -2.06
VPS27YNR006W YBR032WP38223 100 aa2.2□□□□□ -2.06
VPS27YNR006W POR2P40478 281 aa2.2□□□□□ -2.06
VPS27YNR006W YIL163CP40448 117 aa2.19□□□□□ -2.06
VPS27YNR006W YSF3P0C074 85 aaPredicted RBP2.18□□□□□ -2.06
VPS27YNR006W AQY2P0CD90 149 aa2.18□□□□□ -2.06
VPS27YNR006W YMR082CQ04276 118 aa2.18□□□□□ -2.06
VPS27YNR006W YLR363W-AQ3E747 85 aa2.18□□□□□ -2.06
VPS27YNR006W VPS13Q07878 3144 aa2.18□□□□□ -2.06
VPS27YNR006W YHR138CP38841 114 aaPredicted RBP2.17□□□□□ -2.06
VPS27YNR006W PAU5P43575 122 aa2.17□□□□□ -2.06
VPS27YNR006W YHL037CP38733 133 aa2.16□□□□□ -2.06
VPS27YNR006W ECM12O13529 151 aa2.16□□□□□ -2.06
VPS27YNR006W YHR212W-AP0CX91 67 aa2.15□□□□□ -2.07
VPS27YNR006W YDR524C-BQ3E6R4 66 aa2.15□□□□□ -2.07
VPS27YNR006W ACC1Q00955 2233 aaKnown RBP2.14□□□□□ -2.07
VPS27YNR006W RPS22AP0C0W1 130 aaKnown RBP2.14□□□□□ -2.07
VPS27YNR006W PDX3P38075 228 aaKnown RBP2.14□□□□□ -2.07
VPS27YNR006W LSM6Q06406 86 aaKnown RBP2.14□□□□□ -2.07
VPS27YNR006W CCW12Q12127 133 aa2.14□□□□□ -2.07
VPS27YNR006W GCV3P39726 170 aaPredicted RBP2.14□□□□□ -2.07
VPS27YNR006W YDR042CQ03205 200 aa2.14□□□□□ -2.07
VPS27YNR006W SRB6P32570 121 aa2.13□□□□□ -2.07
VPS27YNR006W ENV10Q99382 181 aa2.13□□□□□ -2.07
VPS27YNR006W SUS1Q6WNK7 96 aa2.12□□□□□ -2.07
VPS27YNR006W ROX3P25046 220 aa2.11□□□□□ -2.07
VPS27YNR006W YHL005CP38752 130 aa2.11□□□□□ -2.07
VPS27YNR006W MIC27P50945 234 aa2.11□□□□□ -2.07
VPS27YNR006W IRC21Q04772 201 aa2.11□□□□□ -2.07
VPS27YNR006W YBR013CP38215 129 aa2.1□□□□□ -2.07
VPS27YNR006W YCR095W-AQ3E787 52 aa2.1□□□□□ -2.07
VPS27YNR006W VPS55P47111 140 aa2.09□□□□□ -2.07
VPS27YNR006W RSM18P40033 138 aa2.09□□□□□ -2.08
VPS27YNR006W CWP2P43497 92 aa2.09□□□□□ -2.08
VPS27YNR006W IMP2P46972 177 aa2.09□□□□□ -2.08
VPS27YNR006W MRPS12P53732 153 aa2.09□□□□□ -2.08
VPS27YNR006W YKL018C-AQ3E7A7 99 aa2.09□□□□□ -2.08
VPS27YNR006W STT4P37297 1900 aa2.08□□□□□ -2.08
VPS27YNR006W ICY1Q04329 127 aa2.08□□□□□ -2.08
VPS27YNR006W YNL122CP53921 115 aaPredicted RBP2.07□□□□□ -2.08
VPS27YNR006W YOL118CQ08259 102 aa2.07□□□□□ -2.08
VPS27YNR006W YCL048W-AQ2V2Q2 79 aa2.07□□□□□ -2.08
VPS27YNR006W RPS22BQ3E7Y3 130 aaKnown RBP2.07□□□□□ -2.08
VPS27YNR006W LCL2Q08045 131 aa2.06□□□□□ -2.08
VPS27YNR006W YOL131WQ08270 108 aa2.06□□□□□ -2.08
VPS27YNR006W YGL041C-BQ3E750 60 aa2.06□□□□□ -2.08
VPS27YNR006W PAU6P0CE90 120 aa2.05□□□□□ -2.08
VPS27YNR006W PAU18P0CE91 120 aa2.05□□□□□ -2.08
VPS27YNR006W SPC1P46965 94 aa2.05□□□□□ -2.08
VPS27YNR006W SLH1P53327 1967 aaKnown RBP2.05□□□□□ -2.08
VPS27YNR006W YGR240C-AQ3E786 66 aa2.05□□□□□ -2.08
VPS27YNR006W MHF2Q3E829 80 aa2.05□□□□□ -2.08
VPS27YNR006W SNA2P56508 79 aa2.04□□□□□ -2.08
VPS27YNR006W YMR175W-AQ3E766 64 aa2.04□□□□□ -2.08
VPS27YNR006W YOL013W-AP0C272 63 aaPredicted RBP2.03□□□□□ -2.08
VPS27YNR006W MRP17P28778 131 aa2.03□□□□□ -2.08
VPS27YNR006W ICS3P47034 131 aa2.03□□□□□ -2.08
VPS27YNR006W YJL009WP47078 108 aa2.03□□□□□ -2.08
VPS27YNR006W CCW14O13547 238 aa2.03□□□□□ -2.09
VPS27YNR006W YCR001WP25347 104 aa2.03□□□□□ -2.09
VPS27YNR006W MRPL38P35996 138 aaPredicted RBP2.03□□□□□ -2.09
VPS27YNR006W YBL071CP38185 102 aa2.03□□□□□ -2.09
VPS27YNR006W NHP2P32495 156 aaPredicted RBP2.02□□□□□ -2.09
VPS27YNR006W YAR064WP39563 99 aa2.02□□□□□ -2.09
VPS27YNR006W POC4Q12245 148 aaPredicted RBP2.02□□□□□ -2.09
VPS27YNR006W YDR210WQ03482 75 aa2.01□□□□□ -2.09
VPS27YNR006W RPA12P32529 125 aaKnown RBP2.01□□□□□ -2.09
VPS27YNR006W YCR085WP25650 117 aa2□□□□□ -2.09
VPS27YNR006W YPL038W-AQ3E7B4 63 aa2□□□□□ -2.09
VPS27YNR006W TAO3P40468 2376 aa1.99□□□□□ -2.09
VPS27YNR006W YLR255CO13574 117 aa1.99□□□□□ -2.09
VPS27YNR006W MRPL31P14063 131 aaPredicted RBP1.99□□□□□ -2.09
VPS27YNR006W YDR034W-BQ6Q5X2 51 aa1.99□□□□□ -2.09
VPS27YNR006W BEM2P39960 2167 aaKnown RBP1.99□□□□□ -2.09
VPS27YNR006W LCL1Q02786 101 aa1.99□□□□□ -2.09
VPS27YNR006W MGR2Q02889 113 aa1.99□□□□□ -2.09
VPS27YNR006W BRR2P32639 2163 aaKnown RBP1.99□□□□□ -2.09
VPS27YNR006W YNR034W-AQ3E841 98 aa1.98□□□□□ -2.09
VPS27YNR006W MVB12P42939 101 aa1.97□□□□□ -2.09
VPS27YNR006W YOR072WQ08486 104 aa1.97□□□□□ -2.09
VPS27YNR006W HUG1Q6Q5K6 68 aa1.97□□□□□ -2.09
VPS27YNR006W POL2P21951 2222 aaKnown RBP1.96□□□□□ -2.1
VPS27YNR006W LSM2P38203 95 aaKnown RBP1.94□□□□□ -2.1
VPS27YNR006W MRX7P53869 86 aa1.94□□□□□ -2.1
VPS27YNR006W NUM1Q00402 2748 aa1.94□□□□□ -2.1
VPS27YNR006W PAU8P0CE92 120 aa1.94□□□□□ -2.1
VPS27YNR006W PAU11P0CE93 120 aa1.94□□□□□ -2.1
VPS27YNR006W RPS27AP35997 82 aaKnown RBP1.94□□□□□ -2.1
VPS27YNR006W RPS27BP38711 82 aa1.94□□□□□ -2.1
VPS27YNR006W PAU13P38725 120 aa1.94□□□□□ -2.1
VPS27YNR006W PAU4P53427 120 aa1.94□□□□□ -2.1
VPS27YNR006W COX12Q01519 83 aa1.94□□□□□ -2.1
VPS27YNR006W PAU10Q03050 120 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms