RNA–Protein interactions for RNA: YMR231W

PEP5, Transcript of Histone E3 ligase, component of CORVET membrane tethering complex, yeastyeast

Gene PEP5, Length 3,090 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP5YMR231W SPG4Q04438 115 aa3.22□□□□□ -1.89
PEP5YMR231W EMC6Q12431 108 aa3.22□□□□□ -1.89
PEP5YMR231W KTI11Q3E840 82 aa3.22□□□□□ -1.89
PEP5YMR231W YGR240C-AQ3E786 66 aa3.21□□□□□ -1.9
PEP5YMR231W PBI2P0CT04 75 aaKnown RBP3.21□□□□□ -1.9
PEP5YMR231W ERG28P40030 148 aa3.21□□□□□ -1.9
PEP5YMR231W ERI1P62651 68 aaKnown RBP3.21□□□□□ -1.9
PEP5YMR231W YDR182W-AQ3E796 67 aa3.21□□□□□ -1.9
PEP5YMR231W YMR122W-AQ3E842 84 aa3.21□□□□□ -1.9
PEP5YMR231W YAL065CO13511 128 aa3.21□□□□□ -1.9
PEP5YMR231W RPL2AP0CX45 254 aaKnown RBP3.21□□□□□ -1.9
PEP5YMR231W RPL2BP0CX46 254 aaKnown RBP3.21□□□□□ -1.9
PEP5YMR231W KNH1P50112 268 aa3.21□□□□□ -1.9
PEP5YMR231W PMP3P87284 55 aa3.21□□□□□ -1.9
PEP5YMR231W YER135CP40082 130 aa3.2□□□□□ -1.9
PEP5YMR231W SBH1P52870 82 aa3.2□□□□□ -1.9
PEP5YMR231W YPS5P53057 165 aa3.2□□□□□ -1.9
PEP5YMR231W YNL190WP53872 204 aa3.2□□□□□ -1.9
PEP5YMR231W COF1Q03048 143 aaKnown RBP3.2□□□□□ -1.9
PEP5YMR231W CSF1Q12150 2958 aa3.2□□□□□ -1.9
PEP5YMR231W YER039C-AP0CD97 72 aa3.2□□□□□ -1.9
PEP5YMR231W DSE2P38844 325 aa3.2□□□□□ -1.9
PEP5YMR231W YGR025WP53216 100 aa3.2□□□□□ -1.9
PEP5YMR231W YPL229WQ99395 206 aa3.2□□□□□ -1.9
PEP5YMR231W RPL15AP05748 204 aaKnown RBP3.19□□□□□ -1.9
PEP5YMR231W IRC21Q04772 201 aa3.19□□□□□ -1.9
PEP5YMR231W YHL018WP38744 120 aaPredicted RBP3.19□□□□□ -1.9
PEP5YMR231W YMR295CQ03559 197 aa3.19□□□□□ -1.9
PEP5YMR231W KRE9P39005 276 aa3.18□□□□□ -1.9
PEP5YMR231W SFT1P43682 97 aa3.18□□□□□ -1.9
PEP5YMR231W VAM10Q08474 114 aa3.18□□□□□ -1.9
PEP5YMR231W ATP18P81450 59 aa3.18□□□□□ -1.9
PEP5YMR231W SRL1Q08673 210 aa3.18□□□□□ -1.9
PEP5YMR231W YOL085CQ99345 113 aa3.18□□□□□ -1.9
PEP5YMR231W YBR121C-AP0C5L4 52 aa3.18□□□□□ -1.9
PEP5YMR231W YJR107C-AP0CT86 78 aa3.18□□□□□ -1.9
PEP5YMR231W YBR219CP38317 127 aa3.18□□□□□ -1.9
PEP5YMR231W YIL059CP40520 121 aa3.18□□□□□ -1.9
PEP5YMR231W UBC4P15731 148 aa3.17□□□□□ -1.9
PEP5YMR231W PBA1Q05778 276 aa3.17□□□□□ -1.9
PEP5YMR231W YLL006W-AQ3E814 58 aa3.17□□□□□ -1.9
PEP5YMR231W ALG13P53178 202 aa3.17□□□□□ -1.9
PEP5YMR231W YMR320WQ04897 101 aa3.17□□□□□ -1.9
PEP5YMR231W HFA1P32874 2273 aa3.16□□□□□ -1.9
PEP5YMR231W YKL183C-AQ3E765 70 aa3.16□□□□□ -1.9
PEP5YMR231W YPR010C-AA5Z2X5 72 aa3.16□□□□□ -1.9
PEP5YMR231W TOS8P53147 276 aa3.16□□□□□ -1.9
PEP5YMR231W YLR415CO13578 112 aa3.16□□□□□ -1.9
PEP5YMR231W RPC10P40422 70 aa3.16□□□□□ -1.9
PEP5YMR231W YFR035CP43608 114 aa3.16□□□□□ -1.9
PEP5YMR231W YRA2P36036 203 aaKnown RBP RIP-Chip data3.15□□□□□ -1.9not detected
PEP5YMR231W TRA1P38811 3744 aa3.15□□□□□ -1.91
PEP5YMR231W YLR307C-AQ3E825 87 aa3.15□□□□□ -1.91
PEP5YMR231W TAR1Q8TGM6 124 aa3.15□□□□□ -1.91
PEP5YMR231W YER187WP40102 141 aa3.14□□□□□ -1.91
PEP5YMR231W HAL1Q01766 294 aa3.14□□□□□ -1.91
PEP5YMR231W YDR029WQ12111 104 aa3.14□□□□□ -1.91
PEP5YMR231W HOT13P36078 116 aa3.13□□□□□ -1.91
PEP5YMR231W YOR011W-AQ3E807 68 aa3.13□□□□□ -1.91
PEP5YMR231W YFR009W-AP0C5M9 85 aa3.13□□□□□ -1.91
PEP5YMR231W YCR050CP25630 102 aa3.13□□□□□ -1.91
PEP5YMR231W YNL162W-AQ3E7A8 72 aa3.12□□□□□ -1.91
PEP5YMR231W CRC1Q12289 327 aa3.12□□□□□ -1.91
PEP5YMR231W Q0297Q9ZZV8 51 aa3.12□□□□□ -1.91
PEP5YMR231W COX23P38824 151 aa3.11□□□□□ -1.91
PEP5YMR231W RPL36BO14455 100 aaKnown RBP3.11□□□□□ -1.91
PEP5YMR231W RPL36AP05745 100 aaPredicted RBP3.11□□□□□ -1.91
PEP5YMR231W SPS100P13130 326 aa3.11□□□□□ -1.91
PEP5YMR231W RPL33AP05744 107 aaKnown RBP3.1□□□□□ -1.91
PEP5YMR231W YLR156WP0CE96 114 aa3.1□□□□□ -1.91
PEP5YMR231W YLR159WP0CE97 114 aa3.1□□□□□ -1.91
PEP5YMR231W YLR161WP0CE98 114 aa3.1□□□□□ -1.91
PEP5YMR231W RPL33BP41056 107 aaKnown RBP3.1□□□□□ -1.91
PEP5YMR231W YBL112CQ3E7Y4 105 aa3.1□□□□□ -1.91
PEP5YMR231W YOL166W-AQ8TGJ1 51 aa3.1□□□□□ -1.91
PEP5YMR231W YLR162WQ06235 118 aa3.1□□□□□ -1.91
PEP5YMR231W YFL019CP43576 117 aa3.09□□□□□ -1.91
PEP5YMR231W ATP20Q12233 115 aa3.09□□□□□ -1.91
PEP5YMR231W YOR314WQ12506 109 aa3.09□□□□□ -1.91
PEP5YMR231W TAO3P40468 2376 aa3.09□□□□□ -1.91
PEP5YMR231W MLF3P32047 452 aa3.09□□□□□ -1.91
PEP5YMR231W AIM4P38305 123 aaPredicted RBP3.09□□□□□ -1.91
PEP5YMR231W MPC3P53311 146 aa3.09□□□□□ -1.91
PEP5YMR231W YLR285C-AQ3E771 56 aa3.09□□□□□ -1.91
PEP5YMR231W RPL26AP05743 127 aaKnown RBP3.08□□□□□ -1.92
PEP5YMR231W YBL039W-BP0C268 59 aa3.08□□□□□ -1.92
PEP5YMR231W RPL26BP53221 127 aaKnown RBP3.08□□□□□ -1.92
PEP5YMR231W TDA8Q6B2U8 126 aa3.08□□□□□ -1.92
PEP5YMR231W MVB12P42939 101 aa3.08□□□□□ -1.92
PEP5YMR231W YKL065W-AQ2V2P2 73 aa3.08□□□□□ -1.92
PEP5YMR231W KSH1Q8TGJ3 72 aa3.08□□□□□ -1.92
PEP5YMR231W YDR274CP87283 123 aa3.08□□□□□ -1.92
PEP5YMR231W TSC3Q3E790 80 aa3.08□□□□□ -1.92
PEP5YMR231W YBR209WP38311 105 aa3.07□□□□□ -1.92
PEP5YMR231W YGL260WP53056 76 aa3.07□□□□□ -1.92
PEP5YMR231W FYV5P25585 152 aa3.07□□□□□ -1.92
PEP5YMR231W EDC2P40023 145 aaPredicted RBP3.07□□□□□ -1.92
PEP5YMR231W TMC1Q08422 150 aaPredicted RBP3.07□□□□□ -1.92
PEP5YMR231W HHF1P02309 103 aaKnown RBP3.06□□□□□ -1.92
PEP5YMR231W YBR144CP34215 104 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms