RNA–Protein interactions for RNA: YML040W

YML040W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YML040W, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YML040WYML040W PAU10Q03050 120 aa1.17□□□□□ -2.22
YML040WYML040W PAU9Q3E770 120 aa1.17□□□□□ -2.22
YML040WYML040W YHR213W-AQ8TGT4 77 aa1.17□□□□□ -2.22
YML040WYML040W NUP159P40477 1460 aa1.17□□□□□ -2.22
YML040WYML040W IQG1Q12280 1495 aa1.17□□□□□ -2.22
YML040WYML040W RSF2P46974 1380 aa1.17□□□□□ -2.22
YML040WYML040W HAP1P0CE41 1502 aa1.17□□□□□ -2.22
YML040WYML040W LSM2P38203 95 aaKnown RBP1.16□□□□□ -2.22
YML040WYML040W MSL1P40567 111 aaPredicted RBP1.16□□□□□ -2.22
YML040WYML040W ESP1Q03018 1630 aa1.16□□□□□ -2.22
YML040WYML040W GCN2P15442 1659 aa1.16□□□□□ -2.22
YML040WYML040W VPS15P22219 1454 aa1.16□□□□□ -2.22
YML040WYML040W LTE1P07866 1435 aa1.15□□□□□ -2.22
YML040WYML040W PAI3P01094 68 aa1.15□□□□□ -2.23
YML040WYML040W BPT1P14772 1559 aa1.15□□□□□ -2.23
YML040WYML040W SNU13P39990 126 aaKnown RBP1.15□□□□□ -2.23
YML040WYML040W SMX2P40204 77 aaKnown RBP1.15□□□□□ -2.23
YML040WYML040W SCP1Q08873 200 aa1.15□□□□□ -2.23
YML040WYML040W MLP2P40457 1679 aa1.14□□□□□ -2.23
YML040WYML040W YCF1P39109 1515 aaKnown RBP1.14□□□□□ -2.23
YML040WYML040W HIR3P47171 1648 aa1.14□□□□□ -2.23
YML040WYML040W KOG1P38873 1557 aa1.14□□□□□ -2.23
YML040WYML040W YFR010W-AP0C5N0 62 aa1.14□□□□□ -2.23
YML040WYML040W YGL194C-AQ2V2P6 80 aa1.14□□□□□ -2.23
YML040WYML040W SUS1Q6WNK7 96 aa1.14□□□□□ -2.23
YML040WYML040W USO1P25386 1790 aa1.13□□□□□ -2.23
YML040WYML040W RKR1Q04781 1562 aa1.13□□□□□ -2.23
YML040WYML040W STU1P38198 1513 aa1.13□□□□□ -2.23
YML040WYML040W PDR12Q02785 1511 aa1.13□□□□□ -2.23
YML040WYML040W PDX3P38075 228 aaKnown RBP1.13□□□□□ -2.23
YML040WYML040W ATX1P38636 73 aa1.13□□□□□ -2.23
YML040WYML040W AIM19P40502 157 aa1.13□□□□□ -2.23
YML040WYML040W PAU4P53427 120 aa1.13□□□□□ -2.23
YML040WYML040W YCR075W-AQ3E830 75 aa1.13□□□□□ -2.23
YML040WYML040W YRF1-1P0CX20 1796 aa1.12□□□□□ -2.23
YML040WYML040W YRF1-5P0CX21 1796 aa1.12□□□□□ -2.23
YML040WYML040W YRF1-8P0CX22 1796 aa1.12□□□□□ -2.23
YML040WYML040W YSP2Q06681 1438 aa1.12□□□□□ -2.23
YML040WYML040W YBR292CP38357 123 aa1.12□□□□□ -2.23
YML040WYML040W RSM18P40033 138 aa1.12□□□□□ -2.23
YML040WYML040W YIL134C-AQ45U18 67 aa1.12□□□□□ -2.23
YML040WYML040W POL1P13382 1468 aa1.11□□□□□ -2.23
YML040WYML040W TY2B-LR1P0C2J3 1770 aa1.11□□□□□ -2.23
YML040WYML040W TY2B-FP0CX63 1770 aa1.11□□□□□ -2.23
YML040WYML040W TY2B-GR2P0CX64 1770 aa1.11□□□□□ -2.23
YML040WYML040W TY2B-CP25384 1770 aa1.11□□□□□ -2.23
YML040WYML040W TY2B-DR2Q03494 1770 aa1.11□□□□□ -2.23
YML040WYML040W TY1B-DR1Q03855 1755 aa1.11□□□□□ -2.23
YML040WYML040W TY2B-DR3Q07791 1770 aaKnown RBP1.11□□□□□ -2.23
YML040WYML040W TY2B-OR1Q12113 1770 aa1.11□□□□□ -2.23
YML040WYML040W TY2B-DR1Q12472 1770 aa1.11□□□□□ -2.23
YML040WYML040W TY2B-BQ12491 1770 aa1.11□□□□□ -2.23
YML040WYML040W TY2B-OR2Q12501 1770 aa1.11□□□□□ -2.23
YML040WYML040W TY1B-DR3Q99231 1755 aa1.11□□□□□ -2.23
YML040WYML040W GDB1Q06625 1536 aa1.11□□□□□ -2.23
YML040WYML040W PAU23Q07987 124 aa1.11□□□□□ -2.23
YML040WYML040W YOL131WQ08270 108 aa1.11□□□□□ -2.23
YML040WYML040W PAU17Q12370 124 aa1.11□□□□□ -2.23
YML040WYML040W ARO1P08566 1588 aaKnown RBP1.11□□□□□ -2.23
YML040WYML040W CHC1P22137 1653 aaKnown RBP1.11□□□□□ -2.23
YML040WYML040W RPO21P04050 1733 aaKnown RBP1.1□□□□□ -2.23
YML040WYML040W RRP5Q05022 1729 aaKnown RBP1.1□□□□□ -2.23
YML040WYML040W DNF2Q12675 1612 aa1.1□□□□□ -2.23
YML040WYML040W SNQ2P32568 1501 aaKnown RBP1.1□□□□□ -2.23
YML040WYML040W TY1B-DR5P0C2I2 1755 aa1.1□□□□□ -2.23
YML040WYML040W TY1B-DR6P0C2I3 1755 aa1.1□□□□□ -2.23
YML040WYML040W TY1B-LR2P0C2I5 1755 aa1.1□□□□□ -2.23
YML040WYML040W TY1B-LR3P0C2I6 1755 aaKnown RBP1.1□□□□□ -2.23
YML040WYML040W TY1B-PR1P0C2I9 1755 aaKnown RBP1.1□□□□□ -2.23
YML040WYML040W TY1B-PR2P0C2J0 1756 aa1.1□□□□□ -2.23
YML040WYML040W TY1B-PR3P0C2J1 1755 aaKnown RBP1.1□□□□□ -2.23
YML040WYML040W TY1B-JR1P47098 1755 aa1.1□□□□□ -2.23
YML040WYML040W TY1B-ML2Q03434 1755 aaKnown RBP1.1□□□□□ -2.23
YML040WYML040W TY1B-ER1Q03612 1755 aa1.1□□□□□ -2.23
YML040WYML040W TY1B-ML1Q04711 1755 aaKnown RBP1.1□□□□□ -2.23
YML040WYML040W TY1B-GR2Q12269 1755 aa1.1□□□□□ -2.23
YML040WYML040W TY1B-OLQ12273 1755 aa1.1□□□□□ -2.23
YML040WYML040W TY1B-PLQ12414 1755 aaKnown RBP1.1□□□□□ -2.23
YML040WYML040W NTE1Q04958 1679 aa1.1□□□□□ -2.23
YML040WYML040W ATG2P53855 1592 aa1.1□□□□□ -2.23
YML040WYML040W YDR029WQ12111 104 aa1.1□□□□□ -2.23
YML040WYML040W VMA9Q3E7B6 73 aa1.1□□□□□ -2.23
YML040WYML040W VTH1P40438 1549 aa1.09□□□□□ -2.23
YML040WYML040W VTH2P40890 1549 aa1.09□□□□□ -2.23
YML040WYML040W PDR15Q04182 1529 aaKnown RBP1.09□□□□□ -2.23
YML040WYML040W TY3B-GQ99315 1547 aa1.09□□□□□ -2.23
YML040WYML040W DNF1P32660 1571 aa1.09□□□□□ -2.23
YML040WYML040W ECM12O13529 151 aa1.09□□□□□ -2.24
YML040WYML040W YBR032WP38223 100 aa1.09□□□□□ -2.24
YML040WYML040W RPC10P40422 70 aa1.09□□□□□ -2.24
YML040WYML040W RPS29BP41058 56 aaKnown RBP1.09□□□□□ -2.24
YML040WYML040W CWP2P43497 92 aa1.09□□□□□ -2.24
YML040WYML040W MHF2Q3E829 80 aa1.09□□□□□ -2.24
YML040WYML040W ULS1Q08562 1619 aa1.09□□□□□ -2.24
YML040WYML040W FAS2P19097 1887 aaKnown RBP1.09□□□□□ -2.24
YML040WYML040W CDC25P04821 1589 aa1.08□□□□□ -2.24
YML040WYML040W UTP10P42945 1769 aaKnown RBP1.08□□□□□ -2.24
YML040WYML040W NHP2P32495 156 aaPredicted RBP1.08□□□□□ -2.24
YML040WYML040W YPR145C-AQ2V2P0 78 aa1.08□□□□□ -2.24
YML040WYML040W YLR146W-AQ2V2P1 62 aa1.08□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 65.2 ms