RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeastyeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC39YLR440C ECO1P43605 281 aa3.85□□□□□ -1.79
SEC39YLR440C IRC19Q07843 230 aa3.85□□□□□ -1.79
SEC39YLR440C RRT1P38192 103 aa3.84□□□□□ -1.79
SEC39YLR440C YMR030W-AQ3E760 96 aa3.84□□□□□ -1.79
SEC39YLR440C AGA2P32781 87 aa3.83□□□□□ -1.8
SEC39YLR440C RGM1Q00453 211 aa3.83□□□□□ -1.8
SEC39YLR440C SRL1Q08673 210 aa3.83□□□□□ -1.8
SEC39YLR440C OST5Q92316 86 aa3.83□□□□□ -1.8
SEC39YLR440C AIM4P38305 123 aaPredicted RBP3.83□□□□□ -1.8
SEC39YLR440C COX14P39103 70 aa3.83□□□□□ -1.8
SEC39YLR440C SPI1P40092 148 aa3.83□□□□□ -1.8
SEC39YLR440C YKL065W-AQ2V2P2 73 aa3.83□□□□□ -1.8
SEC39YLR440C BRR2P32639 2163 aaKnown RBP3.83□□□□□ -1.8
SEC39YLR440C CSF1Q12150 2958 aa3.83□□□□□ -1.8
SEC39YLR440C YBR209WP38311 105 aa3.82□□□□□ -1.8
SEC39YLR440C CTR2P38865 189 aa3.82□□□□□ -1.8
SEC39YLR440C YKL018C-AQ3E7A7 99 aa3.82□□□□□ -1.8
SEC39YLR440C CDC39P25655 2108 aaKnown RBP3.82□□□□□ -1.8
SEC39YLR440C YBR056W-AI2HB52 66 aa3.82□□□□□ -1.8
SEC39YLR440C AIM19P40502 157 aa3.82□□□□□ -1.8
SEC39YLR440C ERI1P62651 68 aaKnown RBP3.82□□□□□ -1.8
SEC39YLR440C YDR246W-AQ3E763 66 aa3.82□□□□□ -1.8
SEC39YLR440C YGR121W-AQ3E816 71 aa3.82□□□□□ -1.8
SEC39YLR440C QCR9P22289 66 aa3.81□□□□□ -1.8
SEC39YLR440C MRPL27P36526 146 aaPredicted RBP3.81□□□□□ -1.8
SEC39YLR440C ARC15P40518 154 aaRIP-Chip data3.81□□□□□ -1.8not detected
SEC39YLR440C YLR162WQ06235 118 aa3.81□□□□□ -1.8
SEC39YLR440C TMC1Q08422 150 aaPredicted RBP3.81□□□□□ -1.8
SEC39YLR440C YER188C-AP0C0V2 99 aa3.8□□□□□ -1.8
SEC39YLR440C YML122CQ03207 126 aa3.8□□□□□ -1.8
SEC39YLR440C BPH1P25356 2167 aa3.8□□□□□ -1.8
SEC39YLR440C YFL051CP43552 160 aa3.79□□□□□ -1.8
SEC39YLR440C SED1Q01589 338 aa3.79□□□□□ -1.8
SEC39YLR440C YMR122CQ03879 124 aa3.78□□□□□ -1.8
SEC39YLR440C HFA1P32874 2273 aa3.78□□□□□ -1.8
SEC39YLR440C YIR020CP40575 100 aa3.77□□□□□ -1.81
SEC39YLR440C FLO9P39712 1322 aa3.77□□□□□ -1.81
SEC39YLR440C RPS23AP0CX29 145 aaKnown RBP3.77□□□□□ -1.81
SEC39YLR440C RPS23BP0CX30 145 aa3.77□□□□□ -1.81
SEC39YLR440C RPR2P40571 144 aa3.77□□□□□ -1.81
SEC39YLR440C RPL26BP53221 127 aaKnown RBP3.77□□□□□ -1.81
SEC39YLR440C BSC1Q12140 328 aa3.76□□□□□ -1.81
SEC39YLR440C PRP8P33334 2413 aaKnown RBP3.76□□□□□ -1.81
SEC39YLR440C TRA1P38811 3744 aa3.76□□□□□ -1.81
SEC39YLR440C YGL149WP53116 101 aa3.76□□□□□ -1.81
SEC39YLR440C RPL36BO14455 100 aaKnown RBP3.75□□□□□ -1.81
SEC39YLR440C RPL36AP05745 100 aaPredicted RBP3.75□□□□□ -1.81
SEC39YLR440C MPC2P38857 129 aa3.74□□□□□ -1.81
SEC39YLR440C MIG3P39943 394 aa3.74□□□□□ -1.81
SEC39YLR440C DCV1P43595 202 aa3.74□□□□□ -1.81
SEC39YLR440C YPR153WQ06537 140 aa3.74□□□□□ -1.81
SEC39YLR440C YDL241WQ07738 123 aa3.74□□□□□ -1.81
SEC39YLR440C YPR096CO13587 100 aa3.74□□□□□ -1.81
SEC39YLR440C COX9P07255 59 aa3.74□□□□□ -1.81
SEC39YLR440C YBL071CP38185 102 aa3.74□□□□□ -1.81
SEC39YLR440C YHR022CP38763 256 aa3.74□□□□□ -1.81
SEC39YLR440C YLR285C-AQ3E771 56 aa3.74□□□□□ -1.81
SEC39YLR440C YGR035W-AQ45U48 73 aa3.74□□□□□ -1.81
SEC39YLR440C GCN1P33892 2672 aaKnown RBP3.74□□□□□ -1.81
SEC39YLR440C CRH1P53301 507 aa3.73□□□□□ -1.81
SEC39YLR440C COX23P38824 151 aa3.73□□□□□ -1.81
SEC39YLR440C SPC1P46965 94 aa3.73□□□□□ -1.81
SEC39YLR440C YLR111WQ12528 110 aa3.73□□□□□ -1.81
SEC39YLR440C YHL037CP38733 133 aa3.72□□□□□ -1.81
SEC39YLR440C YOR192C-CQ3E736 78 aa3.72□□□□□ -1.81
SEC39YLR440C COA2Q3E823 68 aa3.72□□□□□ -1.81
SEC39YLR440C YJL197C-AP0C5P0 93 aa3.71□□□□□ -1.81
SEC39YLR440C RPL43AP0CX25 92 aaKnown RBP3.71□□□□□ -1.81
SEC39YLR440C RPL43BP0CX26 92 aa3.71□□□□□ -1.81
SEC39YLR440C YIL086CP40503 102 aa3.71□□□□□ -1.81
SEC39YLR440C YGL260WP53056 76 aa3.71□□□□□ -1.81
SEC39YLR440C IRC21Q04772 201 aa3.71□□□□□ -1.81
SEC39YLR440C PAU7P39545 55 aa3.71□□□□□ -1.82
SEC39YLR440C REE1P40893 198 aa3.71□□□□□ -1.82
SEC39YLR440C YOL029CQ08187 201 aa3.71□□□□□ -1.82
SEC39YLR440C COA3Q3E7B2 85 aa3.71□□□□□ -1.82
SEC39YLR440C RTC6O14464 93 aa3.7□□□□□ -1.82
SEC39YLR440C YPI1P43587 155 aa3.7□□□□□ -1.82
SEC39YLR440C PRM7Q12459 698 aa3.7□□□□□ -1.82
SEC39YLR440C YCR095W-AQ3E787 52 aa3.7□□□□□ -1.82
SEC39YLR440C HSP150P32478 413 aa3.7□□□□□ -1.82
SEC39YLR440C MRPL38P35996 138 aaPredicted RBP3.7□□□□□ -1.82
SEC39YLR440C YGR269WP40326 108 aa3.7□□□□□ -1.82
SEC39YLR440C YNR077CP53758 84 aa3.7□□□□□ -1.82
SEC39YLR440C YLR194CQ05777 254 aa3.7□□□□□ -1.82
SEC39YLR440C YDR182W-AQ3E796 67 aa3.7□□□□□ -1.82
SEC39YLR440C MEC1P38111 2368 aa3.68□□□□□ -1.82
SEC39YLR440C YEL067CP39978 195 aa3.68□□□□□ -1.82
SEC39YLR440C YIL163CP40448 117 aa3.68□□□□□ -1.82
SEC39YLR440C SNA2P56508 79 aa3.68□□□□□ -1.82
SEC39YLR440C YNL208WP40159 199 aaKnown RBP3.68□□□□□ -1.82
SEC39YLR440C YHR125WP38831 101 aa3.67□□□□□ -1.82
SEC39YLR440C EDC1P53080 175 aaPredicted RBP3.67□□□□□ -1.82
SEC39YLR440C YER078W-AQ3E7A2 54 aa3.67□□□□□ -1.82
SEC39YLR440C GLT1Q12680 2145 aaKnown RBP3.67□□□□□ -1.82
SEC39YLR440C HMRA2P0CY13 119 aa3.67□□□□□ -1.82
SEC39YLR440C YCR022CP25620 114 aa3.66□□□□□ -1.82
SEC39YLR440C MRX7P53869 86 aa3.66□□□□□ -1.82
SEC39YLR440C YMR244WQ04018 355 aa3.66□□□□□ -1.82
SEC39YLR440C YPR013CQ12145 317 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms