RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W YJR107C-AP0CT86 78 aa0.3□□□□□ -2.36
SLX4YLR135W TY1B-BRQ12193 1756 aa0.3□□□□□ -2.36
SLX4YLR135W ATX1P38636 73 aa0.29□□□□□ -2.36
SLX4YLR135W YDR029WQ12111 104 aa0.29□□□□□ -2.36
SLX4YLR135W MHF2Q3E829 80 aa0.29□□□□□ -2.36
SLX4YLR135W Q0032Q9ZZX7 96 aa0.29□□□□□ -2.36
SLX4YLR135W RPL38P49167 78 aaKnown RBP0.28□□□□□ -2.36
SLX4YLR135W YNL042W-BQ3E7Z2 85 aa0.28□□□□□ -2.37
SLX4YLR135W YCL001W-BQ96VH2 84 aa0.28□□□□□ -2.37
SLX4YLR135W YFR009W-AP0C5M9 85 aa0.27□□□□□ -2.37
SLX4YLR135W COX7P10174 60 aa0.27□□□□□ -2.37
SLX4YLR135W BSC4P53841 131 aa0.27□□□□□ -2.37
SLX4YLR135W YHR214C-DP0CX93 97 aa0.26□□□□□ -2.37
SLX4YLR135W PDX3P38075 228 aaKnown RBP0.26□□□□□ -2.37
SLX4YLR135W YBR201C-AQ2V2Q3 67 aa0.26□□□□□ -2.37
SLX4YLR135W YIL134C-AQ45U18 67 aa0.26□□□□□ -2.37
SLX4YLR135W SWR1Q05471 1514 aa0.26□□□□□ -2.37
SLX4YLR135W NHP2P32495 156 aaPredicted RBP0.26□□□□□ -2.37
SLX4YLR135W YDR042CQ03205 200 aa0.26□□□□□ -2.37
SLX4YLR135W TY1B-PR2P0C2J0 1756 aa0.26□□□□□ -2.37
SLX4YLR135W ECM29P38737 1868 aa0.25□□□□□ -2.37
SLX4YLR135W DNF3Q12674 1656 aa0.25□□□□□ -2.37
SLX4YLR135W GDB1Q06625 1536 aa0.25□□□□□ -2.37
SLX4YLR135W PDR10P51533 1564 aa0.25□□□□□ -2.37
SLX4YLR135W TY1B-DR6P0C2I3 1755 aa0.24□□□□□ -2.37
SLX4YLR135W TY1B-LR2P0C2I5 1755 aa0.24□□□□□ -2.37
SLX4YLR135W TY1B-PR3P0C2J1 1755 aaKnown RBP0.24□□□□□ -2.37
SLX4YLR135W TY1B-JR2P47100 1755 aaKnown RBP0.24□□□□□ -2.37
SLX4YLR135W TY1B-MR1Q04214 1755 aa0.24□□□□□ -2.37
SLX4YLR135W TY1B-MR2Q04670 1755 aaKnown RBP0.24□□□□□ -2.37
SLX4YLR135W TY1B-NL1Q12112 1755 aa0.24□□□□□ -2.37
SLX4YLR135W TY1B-GR1Q12141 1755 aa0.24□□□□□ -2.37
SLX4YLR135W TY1B-GR3Q12316 1755 aa0.24□□□□□ -2.37
SLX4YLR135W TY1B-PLQ12414 1755 aaKnown RBP0.24□□□□□ -2.37
SLX4YLR135W TY1B-ORQ92393 1755 aa0.24□□□□□ -2.37
SLX4YLR135W POL1P13382 1468 aa0.24□□□□□ -2.37
SLX4YLR135W FPR2P32472 135 aa0.24□□□□□ -2.37
SLX4YLR135W TOM6P33448 61 aa0.24□□□□□ -2.37
SLX4YLR135W YCR075W-AQ3E830 75 aa0.24□□□□□ -2.37
SLX4YLR135W BPH1P25356 2167 aa0.24□□□□□ -2.37
SLX4YLR135W MOT1P32333 1867 aa0.24□□□□□ -2.37
SLX4YLR135W ECM12O13529 151 aa0.23□□□□□ -2.37
SLX4YLR135W SCP1Q08873 200 aa0.23□□□□□ -2.37
SLX4YLR135W HKR1P41809 1802 aa0.23□□□□□ -2.37
SLX4YLR135W TY1B-LR3P0C2I6 1755 aaKnown RBP0.23□□□□□ -2.37
SLX4YLR135W YBR016WP38216 128 aa0.23□□□□□ -2.37
SLX4YLR135W SGF11Q03067 99 aa0.23□□□□□ -2.37
SLX4YLR135W YMR122W-AQ3E842 84 aa0.23□□□□□ -2.37
SLX4YLR135W STT4P37297 1900 aa0.23□□□□□ -2.37
SLX4YLR135W YAL065CO13511 128 aa0.22□□□□□ -2.37
SLX4YLR135W ATP18P81450 59 aa0.22□□□□□ -2.37
SLX4YLR135W PAU23Q07987 124 aa0.22□□□□□ -2.37
SLX4YLR135W PAU17Q12370 124 aa0.22□□□□□ -2.37
SLX4YLR135W SDH6Q3E785 79 aa0.22□□□□□ -2.37
SLX4YLR135W SEN1Q00416 2231 aaKnown RBP0.21□□□□□ -2.38
SLX4YLR135W YMR082CQ04276 118 aa0.21□□□□□ -2.38
SLX4YLR135W YGL194C-AQ2V2P6 80 aa0.2□□□□□ -2.38
SLX4YLR135W TY1B-DR5P0C2I2 1755 aa0.2□□□□□ -2.38
SLX4YLR135W TY1B-PR1P0C2I9 1755 aaKnown RBP0.2□□□□□ -2.38
SLX4YLR135W TY1B-JR1P47098 1755 aa0.2□□□□□ -2.38
SLX4YLR135W TY1B-ML2Q03434 1755 aaKnown RBP0.2□□□□□ -2.38
SLX4YLR135W TY1B-ER1Q03612 1755 aa0.2□□□□□ -2.38
SLX4YLR135W TY1B-ER2Q03619 1755 aa0.2□□□□□ -2.38
SLX4YLR135W TY1B-DR1Q03855 1755 aa0.2□□□□□ -2.38
SLX4YLR135W TY1B-ML1Q04711 1755 aaKnown RBP0.2□□□□□ -2.38
SLX4YLR135W TY1B-LR1Q12088 1755 aaKnown RBP0.2□□□□□ -2.38
SLX4YLR135W TY1B-GR2Q12269 1755 aa0.2□□□□□ -2.38
SLX4YLR135W TY1B-OLQ12273 1755 aa0.2□□□□□ -2.38
SLX4YLR135W TY1B-DR3Q99231 1755 aa0.2□□□□□ -2.38
SLX4YLR135W UTP10P42945 1769 aaKnown RBP0.19□□□□□ -2.38
SLX4YLR135W YCR085WP25650 117 aa0.18□□□□□ -2.38
SLX4YLR135W YDR381C-AQ3E6R5 114 aa0.18□□□□□ -2.38
SLX4YLR135W YPR108W-AQ3E7B3 70 aa0.18□□□□□ -2.38
SLX4YLR135W NOP10Q6Q547 58 aaPredicted RBP0.18□□□□□ -2.38
SLX4YLR135W ESC1Q03661 1658 aaKnown RBP0.18□□□□□ -2.38
SLX4YLR135W YOR105WQ08504 108 aa0.18□□□□□ -2.38
SLX4YLR135W YOR343CQ12484 108 aa0.18□□□□□ -2.38
SLX4YLR135W YKL068W-AQ3E826 78 aa0.18□□□□□ -2.38
SLX4YLR135W PMD1P32634 1753 aa0.18□□□□□ -2.38
SLX4YLR135W UTP20P35194 2493 aaKnown RBP0.17□□□□□ -2.38
SLX4YLR135W XRN1P22147 1528 aaKnown RBP0.17□□□□□ -2.38
SLX4YLR135W YIL156W-BQ2V2P4 73 aa0.17□□□□□ -2.38
SLX4YLR135W YMR175W-AQ3E766 64 aa0.17□□□□□ -2.38
SLX4YLR135W MLP1Q02455 1875 aaKnown RBP0.16□□□□□ -2.38
SLX4YLR135W YOL097W-AQ3E7Y9 61 aa0.16□□□□□ -2.38
SLX4YLR135W LTE1P07866 1435 aa0.16□□□□□ -2.38
SLX4YLR135W CWP2P43497 92 aa0.15□□□□□ -2.38
SLX4YLR135W MDN1Q12019 4910 aaKnown RBP0.15□□□□□ -2.38
SLX4YLR135W YBR032WP38223 100 aa0.15□□□□□ -2.39
SLX4YLR135W SKI3P17883 1432 aaKnown RBP0.14□□□□□ -2.39
SLX4YLR135W EDC1P53080 175 aaPredicted RBP0.14□□□□□ -2.39
SLX4YLR135W YPR145C-AQ2V2P0 78 aa0.14□□□□□ -2.39
SLX4YLR135W YCR108CQ3E819 63 aa0.14□□□□□ -2.39
SLX4YLR135W YSP2Q06681 1438 aa0.13□□□□□ -2.39
SLX4YLR135W YKL065W-AQ2V2P2 73 aa0.13□□□□□ -2.39
SLX4YLR135W APC1P53886 1748 aa0.13□□□□□ -2.39
SLX4YLR135W YGR025WP53216 100 aa0.13□□□□□ -2.39
SLX4YLR135W SIN3P22579 1536 aa0.12□□□□□ -2.39
SLX4YLR135W POC4Q12245 148 aaPredicted RBP0.12□□□□□ -2.39
SLX4YLR135W MMS22Q06164 1454 aa0.12□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 47.1 ms