RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeastyeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRN3YKL125W YCR022CP25620 114 aa4.05□□□□□ -1.76
RRN3YKL125W RPS14BP39516 138 aaKnown RBP4.05□□□□□ -1.76
RRN3YKL125W YGL193CP53097 103 aa4.05□□□□□ -1.76
RRN3YKL125W FAS1P07149 2051 aaKnown RBP4.04□□□□□ -1.76
RRN3YKL125W RPL15AP05748 204 aaKnown RBP4.04□□□□□ -1.76
RRN3YKL125W ATP15P21306 62 aa4.04□□□□□ -1.76
RRN3YKL125W SHU1P38751 150 aa4.04□□□□□ -1.76
RRN3YKL125W SRL1Q08673 210 aa4.04□□□□□ -1.76
RRN3YKL125W CRC1Q12289 327 aa4.04□□□□□ -1.76
RRN3YKL125W TSC3Q3E790 80 aa4.04□□□□□ -1.76
RRN3YKL125W BEM2P39960 2167 aaKnown RBP4.04□□□□□ -1.76
RRN3YKL125W BPH1P25356 2167 aa4.03□□□□□ -1.76
RRN3YKL125W KRE9P39005 276 aa4.03□□□□□ -1.76
RRN3YKL125W YGR018CP53211 109 aa4.03□□□□□ -1.76
RRN3YKL125W YMR254CQ04838 102 aa4.03□□□□□ -1.76
RRN3YKL125W IRC19Q07843 230 aa4.03□□□□□ -1.76
RRN3YKL125W TRS23Q03784 219 aa4.03□□□□□ -1.77
RRN3YKL125W NCE102Q12207 173 aaRIP-Chip data4.03□□□□□ -1.77not detected
RRN3YKL125W RPL26BP53221 127 aaKnown RBP4.02□□□□□ -1.77
RRN3YKL125W SED1Q01589 338 aa4.02□□□□□ -1.77
RRN3YKL125W IRC21Q04772 201 aa4.02□□□□□ -1.77
RRN3YKL125W YGR035W-AQ45U48 73 aa4.02□□□□□ -1.77
RRN3YKL125W NOP10Q6Q547 58 aaPredicted RBP4.02□□□□□ -1.77
RRN3YKL125W TDA2P40045 126 aa4.01□□□□□ -1.77
RRN3YKL125W SPG4Q04438 115 aa4.01□□□□□ -1.77
RRN3YKL125W ACC1Q00955 2233 aaKnown RBP4.01□□□□□ -1.77
RRN3YKL125W YAL064WP39711 94 aa4.01□□□□□ -1.77
RRN3YKL125W CCW14O13547 238 aa4□□□□□ -1.77
RRN3YKL125W YER188C-AP0C0V2 99 aa4□□□□□ -1.77
RRN3YKL125W YHL005CP38752 130 aa4□□□□□ -1.77
RRN3YKL125W YMR122CQ03879 124 aa4□□□□□ -1.77
RRN3YKL125W YOR008C-AQ3E7B9 74 aa4□□□□□ -1.77
RRN3YKL125W SEC16P48415 2195 aaKnown RBP4□□□□□ -1.77
RRN3YKL125W YFL015CP43578 164 aa3.99□□□□□ -1.77
RRN3YKL125W YLR342W-AQ3E810 57 aa3.99□□□□□ -1.77
RRN3YKL125W YOL166W-AQ8TGJ1 51 aa3.99□□□□□ -1.77
RRN3YKL125W HSP150P32478 413 aa3.98□□□□□ -1.77
RRN3YKL125W MPC3P53311 146 aa3.98□□□□□ -1.77
RRN3YKL125W YOR034C-AQ3E735 80 aa3.98□□□□□ -1.77
RRN3YKL125W SEN1Q00416 2231 aaKnown RBP3.98□□□□□ -1.77
RRN3YKL125W OST5Q92316 86 aa3.98□□□□□ -1.77
RRN3YKL125W YAL064W-BO13512 126 aa3.97□□□□□ -1.77
RRN3YKL125W RPL36BO14455 100 aaKnown RBP3.97□□□□□ -1.77
RRN3YKL125W RPL36AP05745 100 aaPredicted RBP3.97□□□□□ -1.77
RRN3YKL125W ARC15P40518 154 aaRIP-Chip data3.97□□□□□ -1.77not detected
RRN3YKL125W YDR182W-AQ3E796 67 aa3.97□□□□□ -1.77
RRN3YKL125W YBL071CP38185 102 aa3.96□□□□□ -1.77
RRN3YKL125W YKL065W-AQ2V2P2 73 aa3.96□□□□□ -1.77
RRN3YKL125W ARF1P11076 181 aaKnown RBP3.96□□□□□ -1.78
RRN3YKL125W YGL088WP53151 121 aa3.96□□□□□ -1.78
RRN3YKL125W YPR153WQ06537 140 aa3.96□□□□□ -1.78
RRN3YKL125W DDR48P18899 430 aaKnown RBP3.95□□□□□ -1.78
RRN3YKL125W TVP23P38962 199 aa3.95□□□□□ -1.78
RRN3YKL125W REE1P40893 198 aa3.95□□□□□ -1.78
RRN3YKL125W BRR2P32639 2163 aaKnown RBP3.95□□□□□ -1.78
RRN3YKL125W YJR107C-AP0CT86 78 aa3.94□□□□□ -1.78
RRN3YKL125W RPS30AP0CX33 63 aaKnown RBP3.94□□□□□ -1.78
RRN3YKL125W RPS30BP0CX34 63 aaKnown RBP3.94□□□□□ -1.78
RRN3YKL125W FYV5P25585 152 aa3.94□□□□□ -1.78
RRN3YKL125W YER135CP40082 130 aa3.94□□□□□ -1.78
RRN3YKL125W YJR146WP47174 117 aa3.94□□□□□ -1.78
RRN3YKL125W SPG1P50088 95 aa3.94□□□□□ -1.78
RRN3YKL125W RGM1Q00453 211 aa3.94□□□□□ -1.78
RRN3YKL125W YOR020W-AQ3E824 90 aa3.94□□□□□ -1.78
RRN3YKL125W YJL027CP47063 138 aaPredicted RBP3.93□□□□□ -1.78
RRN3YKL125W YLR236CA0A023PZG4 107 aa3.92□□□□□ -1.78
RRN3YKL125W RPS23AP0CX29 145 aaKnown RBP3.92□□□□□ -1.78
RRN3YKL125W RPS23BP0CX30 145 aa3.92□□□□□ -1.78
RRN3YKL125W RNH203Q12338 110 aa3.92□□□□□ -1.78
RRN3YKL125W YIR020CP40575 100 aa3.92□□□□□ -1.78
RRN3YKL125W YPS5P53057 165 aa3.92□□□□□ -1.78
RRN3YKL125W POL2P21951 2222 aaKnown RBP3.92□□□□□ -1.78
RRN3YKL125W HOT13P36078 116 aa3.91□□□□□ -1.78
RRN3YKL125W YSF3P0C074 85 aaPredicted RBP3.9□□□□□ -1.78
RRN3YKL125W YHL037CP38733 133 aa3.9□□□□□ -1.78
RRN3YKL125W RPR2P40571 144 aa3.9□□□□□ -1.79
RRN3YKL125W QCR8P08525 94 aa3.89□□□□□ -1.79
RRN3YKL125W RPL38P49167 78 aaKnown RBP3.89□□□□□ -1.79
RRN3YKL125W ATP18P81450 59 aa3.89□□□□□ -1.79
RRN3YKL125W YER145C-AA0A023PYF4 145 aa3.88□□□□□ -1.79
RRN3YKL125W RPS27AP35997 82 aaKnown RBP3.88□□□□□ -1.79
RRN3YKL125W RRT1P38192 103 aa3.88□□□□□ -1.79
RRN3YKL125W RPS27BP38711 82 aa3.88□□□□□ -1.79
RRN3YKL125W YDR114CQ04597 100 aa3.88□□□□□ -1.79
RRN3YKL125W YOR032W-AQ8TGS1 66 aa3.88□□□□□ -1.79
RRN3YKL125W UTH1P36135 365 aa3.88□□□□□ -1.79
RRN3YKL125W YMR244WQ04018 355 aa3.87□□□□□ -1.79
RRN3YKL125W FAB1P34756 2278 aa3.86□□□□□ -1.79
RRN3YKL125W YFR009W-AP0C5M9 85 aa3.86□□□□□ -1.79
RRN3YKL125W YIL156W-BQ2V2P4 73 aa3.86□□□□□ -1.79
RRN3YKL125W YFR032C-BQ8TGU2 87 aa3.86□□□□□ -1.79
RRN3YKL125W QCR10P37299 77 aa3.85□□□□□ -1.79
RRN3YKL125W FYV12Q08559 129 aa3.84□□□□□ -1.79
RRN3YKL125W YEL008WP40001 126 aa3.84□□□□□ -1.8
RRN3YKL125W YGR025WP53216 100 aa3.84□□□□□ -1.8
RRN3YKL125W MRPL38P35996 138 aaPredicted RBP3.83□□□□□ -1.8
RRN3YKL125W MRPL39P36533 70 aa3.83□□□□□ -1.8
RRN3YKL125W LIP1Q03579 150 aa3.83□□□□□ -1.8
RRN3YKL125W YOL014WQ08110 124 aa3.83□□□□□ -1.8
RRN3YKL125W YBR200W-AQ3E755 54 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms