RNA–Protein interactions for RNA: YKL080W

VMA5, Transcript of Subunit C of the V1 peripheral membrane domain of V-ATPase, yeastyeast

Gene VMA5, Length 1,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA5YKL080W YLR307C-AQ3E825 87 aa1.38□□□□□ -2.19
VMA5YKL080W RPL38P49167 78 aaKnown RBP1.37□□□□□ -2.19
VMA5YKL080W PAU23Q07987 124 aa1.37□□□□□ -2.19
VMA5YKL080W PAU17Q12370 124 aa1.37□□□□□ -2.19
VMA5YKL080W YSP2Q06681 1438 aa1.37□□□□□ -2.19
VMA5YKL080W YAL065CO13511 128 aa1.36□□□□□ -2.19
VMA5YKL080W YLR157W-EP0CF00 54 aa1.36□□□□□ -2.19
VMA5YKL080W COX7P10174 60 aa1.36□□□□□ -2.19
VMA5YKL080W YOR314WQ12506 109 aa1.35□□□□□ -2.19
VMA5YKL080W Q0032Q9ZZX7 96 aa1.35□□□□□ -2.19
VMA5YKL080W POL1P13382 1468 aa1.35□□□□□ -2.19
VMA5YKL080W NTE1Q04958 1679 aa1.35□□□□□ -2.19
VMA5YKL080W SEC7P11075 2009 aaKnown RBP1.34□□□□□ -2.19
VMA5YKL080W LSM2P38203 95 aaKnown RBP1.34□□□□□ -2.19
VMA5YKL080W POC4Q12245 148 aaPredicted RBP1.34□□□□□ -2.19
VMA5YKL080W YBR201C-AQ2V2Q3 67 aa1.34□□□□□ -2.19
VMA5YKL080W YDR381C-AQ3E6R5 114 aa1.34□□□□□ -2.19
VMA5YKL080W YHR213W-AQ8TGT4 77 aa1.34□□□□□ -2.19
VMA5YKL080W SEC16P48415 2195 aaKnown RBP1.34□□□□□ -2.2
VMA5YKL080W MYO1P08964 1928 aa1.33□□□□□ -2.2
VMA5YKL080W YOL097W-AQ3E7Y9 61 aa1.33□□□□□ -2.2
VMA5YKL080W AUA1P32450 94 aa1.32□□□□□ -2.2
VMA5YKL080W ATP18P81450 59 aa1.32□□□□□ -2.2
VMA5YKL080W YPR145C-AQ2V2P0 78 aa1.32□□□□□ -2.2
VMA5YKL080W SWM2P40342 146 aa1.31□□□□□ -2.2
VMA5YKL080W YMR122W-AQ3E842 84 aa1.31□□□□□ -2.2
VMA5YKL080W ESC1Q03661 1658 aaKnown RBP1.3□□□□□ -2.2
VMA5YKL080W YJR107C-AP0CT86 78 aa1.3□□□□□ -2.2
VMA5YKL080W RPC10P40422 70 aa1.3□□□□□ -2.2
VMA5YKL080W YOL164W-AQ3E7A5 60 aa1.3□□□□□ -2.2
VMA5YKL080W NOP10Q6Q547 58 aaPredicted RBP1.3□□□□□ -2.2
VMA5YKL080W TY4B-HP0C2J7 1802 aa1.3□□□□□ -2.2
VMA5YKL080W MMS22Q06164 1454 aa1.3□□□□□ -2.2
VMA5YKL080W PAI3P01094 68 aa1.29□□□□□ -2.2
VMA5YKL080W YNL198CP40166 100 aa1.29□□□□□ -2.2
VMA5YKL080W SDH6Q3E785 79 aa1.29□□□□□ -2.2
VMA5YKL080W URA2P07259 2214 aaKnown RBP1.29□□□□□ -2.2
VMA5YKL080W URB1P34241 1764 aaKnown RBP1.27□□□□□ -2.21
VMA5YKL080W QCR9P22289 66 aa1.27□□□□□ -2.21
VMA5YKL080W SGF11Q03067 99 aa1.27□□□□□ -2.21
VMA5YKL080W YRF1-1P0CX20 1796 aa1.26□□□□□ -2.21
VMA5YKL080W YRF1-5P0CX21 1796 aa1.26□□□□□ -2.21
VMA5YKL080W YRF1-8P0CX22 1796 aa1.26□□□□□ -2.21
VMA5YKL080W ATX1P38636 73 aa1.25□□□□□ -2.21
VMA5YKL080W YDR119W-AQ2V2P9 66 aa1.25□□□□□ -2.21
VMA5YKL080W YBR032WP38223 100 aa1.24□□□□□ -2.21
VMA5YKL080W YIL156W-BQ2V2P4 73 aa1.24□□□□□ -2.21
VMA5YKL080W POL2P21951 2222 aaKnown RBP1.23□□□□□ -2.21
VMA5YKL080W YPR108W-AQ3E7B3 70 aa1.23□□□□□ -2.21
VMA5YKL080W ESP1Q03018 1630 aa1.22□□□□□ -2.21
VMA5YKL080W YNL190WP53872 204 aa1.22□□□□□ -2.21
VMA5YKL080W PAU7P39545 55 aa1.21□□□□□ -2.22
VMA5YKL080W YGR121W-AQ3E816 71 aa1.2□□□□□ -2.22
VMA5YKL080W RPS29BP41058 56 aaKnown RBP1.19□□□□□ -2.22
VMA5YKL080W ATP17Q06405 101 aa1.19□□□□□ -2.22
VMA5YKL080W YFL041W-AQ3E817 63 aa1.19□□□□□ -2.22
VMA5YKL080W YIL134C-AQ45U18 67 aa1.19□□□□□ -2.22
VMA5YKL080W TIM12P32830 109 aa1.18□□□□□ -2.22
VMA5YKL080W EDC1P53080 175 aaPredicted RBP1.18□□□□□ -2.22
VMA5YKL080W NUP159P40477 1460 aa1.17□□□□□ -2.22
VMA5YKL080W SSS1P35179 80 aa1.16□□□□□ -2.22
VMA5YKL080W YLR146W-AQ2V2P1 62 aa1.16□□□□□ -2.22
VMA5YKL080W MLP1Q02455 1875 aaKnown RBP1.16□□□□□ -2.22
VMA5YKL080W YGR035W-AQ45U48 73 aa1.15□□□□□ -2.23
VMA5YKL080W HUB1Q6Q546 73 aa1.15□□□□□ -2.23
VMA5YKL080W UFD4P33202 1483 aa1.14□□□□□ -2.23
VMA5YKL080W YDL022C-AP0C5L6 82 aa1.14□□□□□ -2.23
VMA5YKL080W YFR009W-AP0C5M9 85 aa1.14□□□□□ -2.23
VMA5YKL080W YRF1-2P40105 1681 aa1.13□□□□□ -2.23
VMA5YKL080W SPI1P40092 148 aa1.13□□□□□ -2.23
VMA5YKL080W RIM15P43565 1770 aa1.13□□□□□ -2.23
VMA5YKL080W TY1B-BLQ12490 1755 aa1.12□□□□□ -2.23
VMA5YKL080W XRN1P22147 1528 aaKnown RBP1.12□□□□□ -2.23
VMA5YKL080W DNF3Q12674 1656 aa1.11□□□□□ -2.23
VMA5YKL080W BLM10P43583 2143 aa1.11□□□□□ -2.23
VMA5YKL080W YKL018C-AQ3E7A7 99 aa1.1□□□□□ -2.23
VMA5YKL080W SIN3P22579 1536 aa1.1□□□□□ -2.23
VMA5YKL080W YBR016WP38216 128 aa1.09□□□□□ -2.23
VMA5YKL080W YSY6P38374 65 aa1.09□□□□□ -2.23
VMA5YKL080W OLI1P61829 76 aa1.08□□□□□ -2.24
VMA5YKL080W ERI1P62651 68 aaKnown RBP1.08□□□□□ -2.24
VMA5YKL080W YGR025WP53216 100 aa1.07□□□□□ -2.24
VMA5YKL080W YDR182W-AQ3E796 67 aa1.07□□□□□ -2.24
VMA5YKL080W YOR032W-AQ8TGS1 66 aa1.07□□□□□ -2.24
VMA5YKL080W PRP8P33334 2413 aaKnown RBP1.06□□□□□ -2.24
VMA5YKL080W MOT1P32333 1867 aa1.06□□□□□ -2.24
VMA5YKL080W YIL102C-AQ2V2P5 75 aa1.06□□□□□ -2.24
VMA5YKL080W YOR011W-AQ3E807 68 aa1.06□□□□□ -2.24
VMA5YKL080W ECM29P38737 1868 aa1.05□□□□□ -2.24
VMA5YKL080W YOL131WQ08270 108 aa1.04□□□□□ -2.24
VMA5YKL080W BPH1P25356 2167 aa1.04□□□□□ -2.24
VMA5YKL080W TY1B-PR2P0C2J0 1756 aa1.03□□□□□ -2.24
VMA5YKL080W YBL039W-BP0C268 59 aa1.03□□□□□ -2.24
VMA5YKL080W VMA9Q3E7B6 73 aa1.03□□□□□ -2.24
VMA5YKL080W SMC4Q12267 1418 aa1.03□□□□□ -2.24
VMA5YKL080W SCC2Q04002 1493 aa1.03□□□□□ -2.24
VMA5YKL080W TY1B-BRQ12193 1756 aa1.03□□□□□ -2.24
VMA5YKL080W FAS2P19097 1887 aaKnown RBP1.03□□□□□ -2.25
VMA5YKL080W YBR200W-AQ3E755 54 aa1.02□□□□□ -2.25
VMA5YKL080W SNF2P22082 1703 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms