RNA–Protein interactions for RNA: YJL192C

SOP4, Transcript of ER-membrane protein, yeastyeast

Gene SOP4, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOP4YJL192C YLR236CA0A023PZG4 107 aa2.86□□□□□ -1.95
SOP4YJL192C UBC4P15731 148 aa2.86□□□□□ -1.95
SOP4YJL192C RPL16BP26785 198 aaKnown RBP2.86□□□□□ -1.95
SOP4YJL192C SHU1P38751 150 aa2.86□□□□□ -1.95
SOP4YJL192C YHR022CP38763 256 aa2.86□□□□□ -1.95
SOP4YJL192C MIG3P39943 394 aa2.86□□□□□ -1.95
SOP4YJL192C ERG28P40030 148 aa2.86□□□□□ -1.95
SOP4YJL192C VHS2P40463 436 aa2.86□□□□□ -1.95
SOP4YJL192C YNL190WP53872 204 aa2.86□□□□□ -1.95
SOP4YJL192C YNL046WP53956 172 aa2.86□□□□□ -1.95
SOP4YJL192C CCW12Q12127 133 aa2.86□□□□□ -1.95
SOP4YJL192C YBR200W-AQ3E755 54 aa2.86□□□□□ -1.95
SOP4YJL192C IRA2P19158 3079 aa2.86□□□□□ -1.95
SOP4YJL192C YER187WP40102 141 aa2.85□□□□□ -1.95
SOP4YJL192C RSM19P53733 91 aaPredicted RBP2.85□□□□□ -1.95
SOP4YJL192C YOR020W-AQ3E824 90 aa2.85□□□□□ -1.95
SOP4YJL192C KSH1Q8TGJ3 72 aa2.85□□□□□ -1.95
SOP4YJL192C TRA1P38811 3744 aa2.85□□□□□ -1.95
SOP4YJL192C ARC15P40518 154 aaRIP-Chip data2.84□□□□□ -1.95not detected
SOP4YJL192C HAL1Q01766 294 aa2.84□□□□□ -1.95
SOP4YJL192C YAL065CO13511 128 aa2.83□□□□□ -1.96
SOP4YJL192C RPL39P04650 51 aa2.83□□□□□ -1.96
SOP4YJL192C YHL037CP38733 133 aa2.83□□□□□ -1.96
SOP4YJL192C IRC21Q04772 201 aa2.83□□□□□ -1.96
SOP4YJL192C PBP4Q07362 185 aaKnown RBP2.83□□□□□ -1.96
SOP4YJL192C MRPL38P35996 138 aaPredicted RBP2.82□□□□□ -1.96
SOP4YJL192C YAR029WP39549 74 aa2.82□□□□□ -1.96
SOP4YJL192C RPR2P40571 144 aa2.82□□□□□ -1.96
SOP4YJL192C KEG1P43614 200 aa2.82□□□□□ -1.96
SOP4YJL192C RNH203Q12338 110 aa2.82□□□□□ -1.96
SOP4YJL192C YNL277W-AQ3E7Z0 62 aa2.82□□□□□ -1.96
SOP4YJL192C YJR107C-AP0CT86 78 aa2.81□□□□□ -1.96
SOP4YJL192C YEL008WP40001 126 aa2.81□□□□□ -1.96
SOP4YJL192C YNL194CP40169 301 aa2.81□□□□□ -1.96
SOP4YJL192C YNL146C-AQ3E7Z1 64 aa2.81□□□□□ -1.96
SOP4YJL192C SPS100P13130 326 aa2.8□□□□□ -1.96
SOP4YJL192C BET1P22804 142 aa2.8□□□□□ -1.96
SOP4YJL192C COX14P39103 70 aa2.8□□□□□ -1.96
SOP4YJL192C NRM1P53718 249 aa2.8□□□□□ -1.96
SOP4YJL192C SPG4Q04438 115 aa2.8□□□□□ -1.96
SOP4YJL192C YKL183C-AQ3E765 70 aa2.8□□□□□ -1.96
SOP4YJL192C YLR285C-AQ3E771 56 aa2.8□□□□□ -1.96
SOP4YJL192C YDR182W-AQ3E796 67 aa2.8□□□□□ -1.96
SOP4YJL192C TDA8Q6B2U8 126 aa2.8□□□□□ -1.96
SOP4YJL192C RPL15AP05748 204 aaKnown RBP2.79□□□□□ -1.96
SOP4YJL192C YLR156WP0CE96 114 aa2.79□□□□□ -1.96
SOP4YJL192C YLR159WP0CE97 114 aa2.79□□□□□ -1.96
SOP4YJL192C YLR161WP0CE98 114 aa2.79□□□□□ -1.96
SOP4YJL192C UTH1P36135 365 aa2.79□□□□□ -1.96
SOP4YJL192C SED1Q01589 338 aa2.79□□□□□ -1.96
SOP4YJL192C YLR042CQ07990 161 aa2.79□□□□□ -1.96
SOP4YJL192C YRA2P36036 203 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
SOP4YJL192C AIM4P38305 123 aaPredicted RBP2.78□□□□□ -1.96
SOP4YJL192C SFT1P43682 97 aa2.78□□□□□ -1.96
SOP4YJL192C YGR025WP53216 100 aa2.78□□□□□ -1.96
SOP4YJL192C ATP18P81450 59 aa2.78□□□□□ -1.96
SOP4YJL192C ATP20Q12233 115 aa2.78□□□□□ -1.96
SOP4YJL192C YFR035CP43608 114 aa2.77□□□□□ -1.97
SOP4YJL192C YPS5P53057 165 aa2.77□□□□□ -1.97
SOP4YJL192C YLR162WQ06235 118 aa2.77□□□□□ -1.97
SOP4YJL192C YOL085CQ99345 113 aa2.77□□□□□ -1.97
SOP4YJL192C HHF1P02309 103 aaKnown RBP2.76□□□□□ -1.97
SOP4YJL192C RPL29P05747 59 aaPredicted RBP2.76□□□□□ -1.97
SOP4YJL192C YBR209WP38311 105 aa2.76□□□□□ -1.97
SOP4YJL192C ERI1P62651 68 aaKnown RBP2.76□□□□□ -1.97
SOP4YJL192C ICY1Q04329 127 aa2.76□□□□□ -1.97
SOP4YJL192C YPR013CQ12145 317 aa2.76□□□□□ -1.97
SOP4YJL192C YOR314WQ12506 109 aa2.76□□□□□ -1.97
SOP4YJL192C RPL36BO14455 100 aaKnown RBP2.75□□□□□ -1.97
SOP4YJL192C RPL36AP05745 100 aaPredicted RBP2.75□□□□□ -1.97
SOP4YJL192C YFR009W-AP0C5M9 85 aa2.75□□□□□ -1.97
SOP4YJL192C WWM1P43582 211 aaKnown RBP2.75□□□□□ -1.97
SOP4YJL192C YMR295CQ03559 197 aa2.75□□□□□ -1.97
SOP4YJL192C YGR121W-AQ3E816 71 aa2.75□□□□□ -1.97
SOP4YJL192C YOL166W-AQ8TGJ1 51 aa2.75□□□□□ -1.97
SOP4YJL192C SPT4P32914 102 aaPredicted RBP2.74□□□□□ -1.97
SOP4YJL192C YBR219CP38317 127 aa2.74□□□□□ -1.97
SOP4YJL192C YMR320WQ04897 101 aa2.74□□□□□ -1.97
SOP4YJL192C VAM10Q08474 114 aa2.74□□□□□ -1.97
SOP4YJL192C YKL065W-AQ2V2P2 73 aa2.74□□□□□ -1.97
SOP4YJL192C YCL048W-AQ2V2Q2 79 aa2.74□□□□□ -1.97
SOP4YJL192C YOR034C-AQ3E735 80 aa2.74□□□□□ -1.97
SOP4YJL192C YLL006W-AQ3E814 58 aa2.74□□□□□ -1.97
SOP4YJL192C EDC1P53080 175 aaPredicted RBP2.73□□□□□ -1.97
SOP4YJL192C MPC3P53311 146 aa2.73□□□□□ -1.97
SOP4YJL192C PMP3P87284 55 aa2.73□□□□□ -1.97
SOP4YJL192C MRPS8Q03799 155 aa2.73□□□□□ -1.97
SOP4YJL192C YMR244WQ04018 355 aa2.73□□□□□ -1.97
SOP4YJL192C YDL241WQ07738 123 aa2.73□□□□□ -1.97
SOP4YJL192C NOP10Q6Q547 58 aaPredicted RBP2.73□□□□□ -1.97
SOP4YJL192C YER135CP40082 130 aa2.72□□□□□ -1.97
SOP4YJL192C YFL019CP43576 117 aa2.72□□□□□ -1.97
SOP4YJL192C FMP27Q06179 2628 aa2.72□□□□□ -1.97
SOP4YJL192C RSM18P40033 138 aa2.71□□□□□ -1.98
SOP4YJL192C ICS3P47034 131 aa2.71□□□□□ -1.98
SOP4YJL192C YGL088WP53151 121 aa2.71□□□□□ -1.98
SOP4YJL192C MMS2P53152 137 aa2.71□□□□□ -1.98
SOP4YJL192C YMR122W-AQ3E842 84 aa2.71□□□□□ -1.98
SOP4YJL192C YGR035W-AQ45U48 73 aa2.71□□□□□ -1.98
SOP4YJL192C IRA1P18963 3092 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 106.3 ms