RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C MIC27P50945 234 aa1.17□□□□□ -2.22
RTT101YJL047C SNA2P56508 79 aa1.17□□□□□ -2.22
RTT101YJL047C PDX3P38075 228 aaKnown RBP1.16□□□□□ -2.22
RTT101YJL047C MRX7P53869 86 aa1.16□□□□□ -2.22
RTT101YJL047C YOR343CQ12484 108 aa1.16□□□□□ -2.22
RTT101YJL047C TY2B-LR1P0C2J3 1770 aa1.16□□□□□ -2.22
RTT101YJL047C TY2B-FP0CX63 1770 aa1.16□□□□□ -2.22
RTT101YJL047C TY2B-GR2P0CX64 1770 aa1.16□□□□□ -2.22
RTT101YJL047C TY2B-CP25384 1770 aa1.16□□□□□ -2.22
RTT101YJL047C TY2B-DR2Q03494 1770 aa1.16□□□□□ -2.22
RTT101YJL047C TY2B-DR3Q07791 1770 aaKnown RBP1.16□□□□□ -2.22
RTT101YJL047C TY2B-OR1Q12113 1770 aa1.16□□□□□ -2.22
RTT101YJL047C TY2B-DR1Q12472 1770 aa1.16□□□□□ -2.22
RTT101YJL047C TY2B-BQ12491 1770 aa1.16□□□□□ -2.22
RTT101YJL047C TY2B-OR2Q12501 1770 aa1.16□□□□□ -2.22
RTT101YJL047C BRR2P32639 2163 aaKnown RBP1.16□□□□□ -2.22
RTT101YJL047C YLR255CO13574 117 aa1.16□□□□□ -2.22
RTT101YJL047C AQY2P0CD90 149 aa1.16□□□□□ -2.22
RTT101YJL047C YBR292CP38357 123 aa1.16□□□□□ -2.22
RTT101YJL047C IRC21Q04772 201 aa1.16□□□□□ -2.22
RTT101YJL047C YNR034W-AQ3E841 98 aa1.16□□□□□ -2.22
RTT101YJL047C SRB8P25648 1427 aa1.15□□□□□ -2.23
RTT101YJL047C YGL041C-BQ3E750 60 aa1.15□□□□□ -2.23
RTT101YJL047C MOT1P32333 1867 aa1.15□□□□□ -2.23
RTT101YJL047C PAU8P0CE92 120 aa1.15□□□□□ -2.23
RTT101YJL047C PAU11P0CE93 120 aa1.15□□□□□ -2.23
RTT101YJL047C YHR212W-AP0CX91 67 aa1.15□□□□□ -2.23
RTT101YJL047C PAU13P38725 120 aa1.15□□□□□ -2.23
RTT101YJL047C PAU4P53427 120 aa1.15□□□□□ -2.23
RTT101YJL047C PAU10Q03050 120 aa1.15□□□□□ -2.23
RTT101YJL047C PAU9Q3E770 120 aa1.15□□□□□ -2.23
RTT101YJL047C YGR240C-AQ3E786 66 aa1.15□□□□□ -2.23
RTT101YJL047C YPL038W-AQ3E7B4 63 aa1.15□□□□□ -2.23
RTT101YJL047C PDR12Q02785 1511 aa1.14□□□□□ -2.23
RTT101YJL047C ATX1P38636 73 aa1.14□□□□□ -2.23
RTT101YJL047C YNL122CP53921 115 aaPredicted RBP1.14□□□□□ -2.23
RTT101YJL047C UFD4P33202 1483 aa1.13□□□□□ -2.23
RTT101YJL047C YER188C-AP0C0V2 99 aa1.13□□□□□ -2.23
RTT101YJL047C PAU1P0CE88 120 aa1.13□□□□□ -2.23
RTT101YJL047C PAU14P0CE89 120 aa1.13□□□□□ -2.23
RTT101YJL047C TIM12P32830 109 aa1.13□□□□□ -2.23
RTT101YJL047C YOL131WQ08270 108 aa1.13□□□□□ -2.23
RTT101YJL047C APC1P53886 1748 aa1.13□□□□□ -2.23
RTT101YJL047C MON2P48563 1636 aaPredicted RBP1.13□□□□□ -2.23
RTT101YJL047C RPS11AP0CX47 156 aaKnown RBP1.13□□□□□ -2.23
RTT101YJL047C RPS11BP0CX48 156 aaKnown RBP1.13□□□□□ -2.23
RTT101YJL047C MPC2P38857 129 aa1.13□□□□□ -2.23
RTT101YJL047C YOR314WQ12506 109 aa1.13□□□□□ -2.23
RTT101YJL047C YIL156W-BQ2V2P4 73 aa1.13□□□□□ -2.23
RTT101YJL047C RPO21P04050 1733 aaKnown RBP1.12□□□□□ -2.23
RTT101YJL047C SSS1P35179 80 aa1.12□□□□□ -2.23
RTT101YJL047C SWM2P40342 146 aa1.12□□□□□ -2.23
RTT101YJL047C YDR010CQ12426 110 aa1.12□□□□□ -2.23
RTT101YJL047C YGR121W-AQ3E816 71 aa1.12□□□□□ -2.23
RTT101YJL047C SEC16P48415 2195 aaKnown RBP1.12□□□□□ -2.23
RTT101YJL047C BSC4P53841 131 aa1.12□□□□□ -2.23
RTT101YJL047C LCL1Q02786 101 aa1.12□□□□□ -2.23
RTT101YJL047C IQG1Q12280 1495 aa1.11□□□□□ -2.23
RTT101YJL047C SMC4Q12267 1418 aa1.11□□□□□ -2.23
RTT101YJL047C YNL198CP40166 100 aa1.11□□□□□ -2.23
RTT101YJL047C PAU23Q07987 124 aa1.11□□□□□ -2.23
RTT101YJL047C PAU20Q08322 120 aa1.11□□□□□ -2.23
RTT101YJL047C PAU17Q12370 124 aa1.11□□□□□ -2.23
RTT101YJL047C YFL041W-AQ3E817 63 aa1.11□□□□□ -2.23
RTT101YJL047C DNF3Q12674 1656 aa1.11□□□□□ -2.23
RTT101YJL047C VPS15P22219 1454 aa1.11□□□□□ -2.23
RTT101YJL047C MYO4P32492 1471 aa1.11□□□□□ -2.23
RTT101YJL047C YHR173CP38864 112 aa1.11□□□□□ -2.23
RTT101YJL047C AIM19P40502 157 aa1.11□□□□□ -2.23
RTT101YJL047C YJL009WP47078 108 aa1.11□□□□□ -2.23
RTT101YJL047C NOP10Q6Q547 58 aaPredicted RBP1.11□□□□□ -2.23
RTT101YJL047C HAP1P0CE41 1502 aa1.1□□□□□ -2.23
RTT101YJL047C YOL013W-AP0C272 63 aaPredicted RBP1.1□□□□□ -2.23
RTT101YJL047C MRPL31P14063 131 aaPredicted RBP1.1□□□□□ -2.23
RTT101YJL047C COX12Q01519 83 aa1.1□□□□□ -2.23
RTT101YJL047C YOR105WQ08504 108 aa1.1□□□□□ -2.23
RTT101YJL047C POL2P21951 2222 aaKnown RBP1.1□□□□□ -2.23
RTT101YJL047C YAL065CO13511 128 aa1.1□□□□□ -2.23
RTT101YJL047C COX19Q3E731 98 aa1.1□□□□□ -2.23
RTT101YJL047C SPO14P36126 1683 aa1.1□□□□□ -2.23
RTT101YJL047C BPH1P25356 2167 aa1.1□□□□□ -2.23
RTT101YJL047C HFA1P32874 2273 aa1.09□□□□□ -2.23
RTT101YJL047C BEM2P39960 2167 aaKnown RBP1.09□□□□□ -2.24
RTT101YJL047C YCR001WP25347 104 aa1.09□□□□□ -2.24
RTT101YJL047C YKL065W-AQ2V2P2 73 aa1.09□□□□□ -2.24
RTT101YJL047C YGR035W-AQ45U48 73 aa1.09□□□□□ -2.24
RTT101YJL047C RIM15P43565 1770 aa1.08□□□□□ -2.24
RTT101YJL047C QCR9P22289 66 aa1.08□□□□□ -2.24
RTT101YJL047C FPR2P32472 135 aa1.08□□□□□ -2.24
RTT101YJL047C YAR064WP39563 99 aa1.08□□□□□ -2.24
RTT101YJL047C YDL022C-AP0C5L6 82 aa1.08□□□□□ -2.24
RTT101YJL047C MGR2Q02889 113 aa1.08□□□□□ -2.24
RTT101YJL047C YIL134C-AQ45U18 67 aa1.08□□□□□ -2.24
RTT101YJL047C ARO1P08566 1588 aaKnown RBP1.08□□□□□ -2.24
RTT101YJL047C YIL086CP40503 102 aa1.07□□□□□ -2.24
RTT101YJL047C HUG1Q6Q5K6 68 aa1.07□□□□□ -2.24
RTT101YJL047C BLM10P43583 2143 aa1.07□□□□□ -2.24
RTT101YJL047C YBR056W-AI2HB52 66 aa1.07□□□□□ -2.24
RTT101YJL047C DNF2Q12675 1612 aa1.06□□□□□ -2.24
RTT101YJL047C SHU1P38751 150 aa1.06□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms