RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W YHR173CP38864 112 aa0.63□□□□□ -2.31
RPL40AYIL148W LCL1Q02786 101 aa0.63□□□□□ -2.31
RPL40AYIL148W YOR314WQ12506 109 aa0.63□□□□□ -2.31
RPL40AYIL148W YMR175W-AQ3E766 64 aa0.63□□□□□ -2.31
RPL40AYIL148W YBR072C-AQ3E794 53 aa0.63□□□□□ -2.31
RPL40AYIL148W YAL065CO13511 128 aa0.62□□□□□ -2.31
RPL40AYIL148W YLR255CO13574 117 aa0.62□□□□□ -2.31
RPL40AYIL148W YLR157W-EP0CF00 54 aa0.62□□□□□ -2.31
RPL40AYIL148W RPS11AP0CX47 156 aaKnown RBP0.62□□□□□ -2.31
RPL40AYIL148W RPS11BP0CX48 156 aaKnown RBP0.62□□□□□ -2.31
RPL40AYIL148W PAU7P39545 55 aa0.62□□□□□ -2.31
RPL40AYIL148W RPL38P49167 78 aaKnown RBP0.62□□□□□ -2.31
RPL40AYIL148W MRPS12P53732 153 aa0.62□□□□□ -2.31
RPL40AYIL148W SGF11Q03067 99 aa0.62□□□□□ -2.31
RPL40AYIL148W POC4Q12245 148 aaPredicted RBP0.62□□□□□ -2.31
RPL40AYIL148W YPR145C-AQ2V2P0 78 aa0.62□□□□□ -2.31
RPL40AYIL148W YOL097W-AQ3E7Y9 61 aa0.62□□□□□ -2.31
RPL40AYIL148W YNL042W-BQ3E7Z2 85 aa0.62□□□□□ -2.31
RPL40AYIL148W YFL041W-AQ3E817 63 aa0.62□□□□□ -2.31
RPL40AYIL148W URA2P07259 2214 aaKnown RBP0.62□□□□□ -2.31
RPL40AYIL148W YSP2Q06681 1438 aa0.62□□□□□ -2.31
RPL40AYIL148W NUP159P40477 1460 aa0.61□□□□□ -2.31
RPL40AYIL148W BNI1P41832 1953 aa0.61□□□□□ -2.31
RPL40AYIL148W COX7P10174 60 aa0.61□□□□□ -2.31
RPL40AYIL148W SSS1P35179 80 aa0.61□□□□□ -2.31
RPL40AYIL148W ATP18P81450 59 aa0.61□□□□□ -2.31
RPL40AYIL148W YBR201C-AQ2V2Q3 67 aa0.61□□□□□ -2.31
RPL40AYIL148W SDH6Q3E785 79 aa0.61□□□□□ -2.31
RPL40AYIL148W Q0032Q9ZZX7 96 aa0.61□□□□□ -2.31
RPL40AYIL148W SMC4Q12267 1418 aa0.61□□□□□ -2.31
RPL40AYIL148W POL1P13382 1468 aa0.61□□□□□ -2.31
RPL40AYIL148W ESP1Q03018 1630 aa0.6□□□□□ -2.31
RPL40AYIL148W NTE1Q04958 1679 aa0.6□□□□□ -2.31
RPL40AYIL148W YJR107C-AP0CT86 78 aa0.6□□□□□ -2.31
RPL40AYIL148W YLR146W-AQ2V2P1 62 aa0.6□□□□□ -2.31
RPL40AYIL148W YDR119W-AQ2V2P9 66 aa0.6□□□□□ -2.31
RPL40AYIL148W HUB1Q6Q546 73 aa0.6□□□□□ -2.31
RPL40AYIL148W NOP10Q6Q547 58 aaPredicted RBP0.6□□□□□ -2.31
RPL40AYIL148W MYO1P08964 1928 aa0.6□□□□□ -2.31
RPL40AYIL148W MLP1Q02455 1875 aaKnown RBP0.59□□□□□ -2.31
RPL40AYIL148W BPT1P14772 1559 aa0.59□□□□□ -2.31
RPL40AYIL148W TIM12P32830 109 aa0.59□□□□□ -2.31
RPL40AYIL148W YSY6P38374 65 aa0.59□□□□□ -2.31
RPL40AYIL148W YNL198CP40166 100 aa0.59□□□□□ -2.31
RPL40AYIL148W YDR210WQ03482 75 aa0.59□□□□□ -2.31
RPL40AYIL148W YOL131WQ08270 108 aa0.59□□□□□ -2.31
RPL40AYIL148W YPR108W-AQ3E7B3 70 aa0.59□□□□□ -2.31
RPL40AYIL148W YMR122W-AQ3E842 84 aa0.59□□□□□ -2.31
RPL40AYIL148W UFD4P33202 1483 aa0.59□□□□□ -2.32
RPL40AYIL148W SIN3P22579 1536 aa0.59□□□□□ -2.32
RPL40AYIL148W MMS1Q06211 1407 aa0.58□□□□□ -2.32
RPL40AYIL148W YBR032WP38223 100 aa0.58□□□□□ -2.32
RPL40AYIL148W ATP17Q06405 101 aa0.58□□□□□ -2.32
RPL40AYIL148W YIL156W-BQ2V2P4 73 aa0.58□□□□□ -2.32
RPL40AYIL148W YIL102C-AQ2V2P5 75 aa0.58□□□□□ -2.32
RPL40AYIL148W VMA9Q3E7B6 73 aa0.58□□□□□ -2.32
RPL40AYIL148W SCC2Q04002 1493 aa0.58□□□□□ -2.32
RPL40AYIL148W YRF1-1P0CX20 1796 aa0.57□□□□□ -2.32
RPL40AYIL148W YRF1-5P0CX21 1796 aa0.57□□□□□ -2.32
RPL40AYIL148W YRF1-8P0CX22 1796 aa0.57□□□□□ -2.32
RPL40AYIL148W YRF1-2P40105 1681 aa0.57□□□□□ -2.32
RPL40AYIL148W MYO4P32492 1471 aa0.57□□□□□ -2.32
RPL40AYIL148W IQG1Q12280 1495 aa0.57□□□□□ -2.32
RPL40AYIL148W YFR010W-AP0C5N0 62 aa0.57□□□□□ -2.32
RPL40AYIL148W SPI1P40092 148 aa0.57□□□□□ -2.32
RPL40AYIL148W RPC10P40422 70 aa0.57□□□□□ -2.32
RPL40AYIL148W OLI1P61829 76 aa0.57□□□□□ -2.32
RPL40AYIL148W YGR121W-AQ3E816 71 aa0.57□□□□□ -2.32
RPL40AYIL148W YIL134C-AQ45U18 67 aa0.57□□□□□ -2.32
RPL40AYIL148W TY1B-PR2P0C2J0 1756 aa0.57□□□□□ -2.32
RPL40AYIL148W TY1B-NL2Q99337 1749 aaKnown RBP0.56□□□□□ -2.32
RPL40AYIL148W URB1P34241 1764 aaKnown RBP0.56□□□□□ -2.32
RPL40AYIL148W TCB3Q03640 1545 aaKnown RBP0.56□□□□□ -2.32
RPL40AYIL148W YDR182W-AQ3E796 67 aa0.56□□□□□ -2.32
RPL40AYIL148W YOL164W-AQ3E7A5 60 aa0.56□□□□□ -2.32
RPL40AYIL148W YKL018C-AQ3E7A7 99 aa0.56□□□□□ -2.32
RPL40AYIL148W YGR035W-AQ45U48 73 aa0.56□□□□□ -2.32
RPL40AYIL148W TY4B-HP0C2J7 1802 aa0.56□□□□□ -2.32
RPL40AYIL148W IML1P47170 1584 aa0.56□□□□□ -2.32
RPL40AYIL148W SEC7P11075 2009 aaKnown RBP0.55□□□□□ -2.32
RPL40AYIL148W VPS15P22219 1454 aa0.55□□□□□ -2.32
RPL40AYIL148W EDC1P53080 175 aaPredicted RBP0.55□□□□□ -2.32
RPL40AYIL148W YNL190WP53872 204 aa0.55□□□□□ -2.32
RPL40AYIL148W ERI1P62651 68 aaKnown RBP0.55□□□□□ -2.32
RPL40AYIL148W YOR032W-AQ8TGS1 66 aa0.55□□□□□ -2.32
RPL40AYIL148W DOP1Q03921 1698 aa0.55□□□□□ -2.32
RPL40AYIL148W SEC16P48415 2195 aaKnown RBP0.55□□□□□ -2.32
RPL40AYIL148W XRN1P22147 1528 aaKnown RBP0.54□□□□□ -2.32
RPL40AYIL148W YBL039W-BP0C268 59 aa0.54□□□□□ -2.32
RPL40AYIL148W YDL022C-AP0C5L6 82 aa0.54□□□□□ -2.32
RPL40AYIL148W RPS30AP0CX33 63 aaKnown RBP0.54□□□□□ -2.32
RPL40AYIL148W RPS30BP0CX34 63 aaKnown RBP0.54□□□□□ -2.32
RPL40AYIL148W AUA1P32450 94 aa0.54□□□□□ -2.32
RPL40AYIL148W TY1B-BRQ12193 1756 aa0.54□□□□□ -2.32
RPL40AYIL148W FAS2P19097 1887 aaKnown RBP0.54□□□□□ -2.32
RPL40AYIL148W RPO31P04051 1460 aa0.54□□□□□ -2.32
RPL40AYIL148W PDR5P33302 1511 aaKnown RBP0.54□□□□□ -2.32
RPL40AYIL148W BLM10P43583 2143 aa0.53□□□□□ -2.32
RPL40AYIL148W RPS29BP41058 56 aaKnown RBP0.53□□□□□ -2.32
RPL40AYIL148W SIP18P50263 79 aa0.53□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms