RNA–Protein interactions for RNA: YHR052W

CIC1, Transcript of Essential protein that interacts with proteasome components, yeastyeast

Gene CIC1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIC1YHR052W ATX1P38636 73 aa0.73□□□□□ -2.29
CIC1YHR052W LCL1Q02786 101 aa0.73□□□□□ -2.29
CIC1YHR052W YBR072C-AQ3E794 53 aa0.73□□□□□ -2.29
CIC1YHR052W SLH1P53327 1967 aaKnown RBP0.73□□□□□ -2.29
CIC1YHR052W NUP159P40477 1460 aa0.73□□□□□ -2.29
CIC1YHR052W YSP2Q06681 1438 aa0.72□□□□□ -2.29
CIC1YHR052W DOP1Q03921 1698 aa0.72□□□□□ -2.29
CIC1YHR052W MOT1P32333 1867 aa0.72□□□□□ -2.29
CIC1YHR052W YLR255CO13574 117 aa0.72□□□□□ -2.29
CIC1YHR052W RPL43AP0CX25 92 aaKnown RBP0.72□□□□□ -2.29
CIC1YHR052W RPL43BP0CX26 92 aa0.72□□□□□ -2.29
CIC1YHR052W CDC39P25655 2108 aaKnown RBP0.72□□□□□ -2.29
CIC1YHR052W MRPL38P35996 138 aaPredicted RBP0.72□□□□□ -2.29
CIC1YHR052W RPL38P49167 78 aaKnown RBP0.72□□□□□ -2.29
CIC1YHR052W MRPS12P53732 153 aa0.72□□□□□ -2.29
CIC1YHR052W SGF11Q03067 99 aa0.72□□□□□ -2.29
CIC1YHR052W PAU23Q07987 124 aa0.72□□□□□ -2.29
CIC1YHR052W POC4Q12245 148 aaPredicted RBP0.72□□□□□ -2.29
CIC1YHR052W PAU17Q12370 124 aa0.72□□□□□ -2.29
CIC1YHR052W YOR314WQ12506 109 aa0.72□□□□□ -2.29
CIC1YHR052W YOR034C-AQ3E735 80 aa0.72□□□□□ -2.29
CIC1YHR052W YOL097W-AQ3E7Y9 61 aa0.72□□□□□ -2.29
CIC1YHR052W YNL042W-BQ3E7Z2 85 aa0.72□□□□□ -2.29
CIC1YHR052W Q0032Q9ZZX7 96 aa0.72□□□□□ -2.29
CIC1YHR052W TY4B-HP0C2J7 1802 aa0.72□□□□□ -2.29
CIC1YHR052W SIN3P22579 1536 aa0.72□□□□□ -2.29
CIC1YHR052W TY1B-BRQ12193 1756 aa0.72□□□□□ -2.29
CIC1YHR052W APC1P53886 1748 aa0.72□□□□□ -2.29
CIC1YHR052W RPS11AP0CX47 156 aaKnown RBP0.71□□□□□ -2.3
CIC1YHR052W RPS11BP0CX48 156 aaKnown RBP0.71□□□□□ -2.3
CIC1YHR052W QCR9P22289 66 aa0.71□□□□□ -2.3
CIC1YHR052W ATP18P81450 59 aa0.71□□□□□ -2.3
CIC1YHR052W YDR210WQ03482 75 aa0.71□□□□□ -2.3
CIC1YHR052W YPR145C-AQ2V2P0 78 aa0.71□□□□□ -2.3
CIC1YHR052W YMR175W-AQ3E766 64 aa0.71□□□□□ -2.3
CIC1YHR052W IQG1Q12280 1495 aa0.71□□□□□ -2.3
CIC1YHR052W FAS2P19097 1887 aaKnown RBP0.71□□□□□ -2.3
CIC1YHR052W IML1P47170 1584 aa0.7□□□□□ -2.3
CIC1YHR052W XRN1P22147 1528 aaKnown RBP0.7□□□□□ -2.3
CIC1YHR052W SCC2Q04002 1493 aa0.7□□□□□ -2.3
CIC1YHR052W YAL065CO13511 128 aa0.7□□□□□ -2.3
CIC1YHR052W SWM2P40342 146 aa0.7□□□□□ -2.3
CIC1YHR052W YBR201C-AQ2V2Q3 67 aa0.7□□□□□ -2.3
CIC1YHR052W SDH6Q3E785 79 aa0.7□□□□□ -2.3
CIC1YHR052W SMC4Q12267 1418 aa0.7□□□□□ -2.3
CIC1YHR052W RRP5Q05022 1729 aaKnown RBP0.69□□□□□ -2.3
CIC1YHR052W DNF3Q12674 1656 aa0.69□□□□□ -2.3
CIC1YHR052W SEC7P11075 2009 aaKnown RBP0.69□□□□□ -2.3
CIC1YHR052W MYO4P32492 1471 aa0.69□□□□□ -2.3
CIC1YHR052W PAU7P39545 55 aa0.69□□□□□ -2.3
CIC1YHR052W ACC1Q00955 2233 aaKnown RBP0.69□□□□□ -2.3
CIC1YHR052W ECM29P38737 1868 aa0.69□□□□□ -2.3
CIC1YHR052W TCB3Q03640 1545 aaKnown RBP0.69□□□□□ -2.3
CIC1YHR052W UFD4P33202 1483 aa0.68□□□□□ -2.3
CIC1YHR052W RIM15P43565 1770 aa0.68□□□□□ -2.3
CIC1YHR052W TY1B-BLQ12490 1755 aa0.68□□□□□ -2.3
CIC1YHR052W YJR107C-AP0CT86 78 aa0.68□□□□□ -2.3
CIC1YHR052W KOG1P38873 1557 aa0.68□□□□□ -2.3
CIC1YHR052W YNL198CP40166 100 aa0.68□□□□□ -2.3
CIC1YHR052W YFL041W-AQ3E817 63 aa0.68□□□□□ -2.3
CIC1YHR052W NOP10Q6Q547 58 aaPredicted RBP0.68□□□□□ -2.3
CIC1YHR052W TY1B-DR6P0C2I3 1755 aa0.68□□□□□ -2.3
CIC1YHR052W TY1B-LR2P0C2I5 1755 aa0.68□□□□□ -2.3
CIC1YHR052W TY1B-LR3P0C2I6 1755 aaKnown RBP0.68□□□□□ -2.3
CIC1YHR052W TY1B-PR3P0C2J1 1755 aaKnown RBP0.68□□□□□ -2.3
CIC1YHR052W TY1B-JR2P47100 1755 aaKnown RBP0.68□□□□□ -2.3
CIC1YHR052W TY1B-MR1Q04214 1755 aa0.68□□□□□ -2.3
CIC1YHR052W TY1B-MR2Q04670 1755 aaKnown RBP0.68□□□□□ -2.3
CIC1YHR052W TY1B-NL1Q12112 1755 aa0.68□□□□□ -2.3
CIC1YHR052W TY1B-GR1Q12141 1755 aa0.68□□□□□ -2.3
CIC1YHR052W TY1B-GR3Q12316 1755 aa0.68□□□□□ -2.3
CIC1YHR052W TY1B-PLQ12414 1755 aaKnown RBP0.68□□□□□ -2.3
CIC1YHR052W TY1B-ORQ92393 1755 aa0.68□□□□□ -2.3
CIC1YHR052W DNF1P32660 1571 aa0.67□□□□□ -2.3
CIC1YHR052W SSS1P35179 80 aa0.67□□□□□ -2.3
CIC1YHR052W YLR146W-AQ2V2P1 62 aa0.67□□□□□ -2.3
CIC1YHR052W YDR119W-AQ2V2P9 66 aa0.67□□□□□ -2.3
CIC1YHR052W YPR108W-AQ3E7B3 70 aa0.67□□□□□ -2.3
CIC1YHR052W YMR122W-AQ3E842 84 aa0.67□□□□□ -2.3
CIC1YHR052W HUB1Q6Q546 73 aa0.67□□□□□ -2.3
CIC1YHR052W SPO14P36126 1683 aa0.67□□□□□ -2.3
CIC1YHR052W RPO31P04051 1460 aa0.67□□□□□ -2.3
CIC1YHR052W LAA1P39526 2014 aa0.66□□□□□ -2.3
CIC1YHR052W UTP10P42945 1769 aaKnown RBP0.66□□□□□ -2.3
CIC1YHR052W TY1B-DR1Q03855 1755 aa0.66□□□□□ -2.3
CIC1YHR052W TY1B-DR3Q99231 1755 aa0.66□□□□□ -2.3
CIC1YHR052W ATP17Q06405 101 aa0.66□□□□□ -2.3
CIC1YHR052W YIL156W-BQ2V2P4 73 aa0.66□□□□□ -2.3
CIC1YHR052W YGR121W-AQ3E816 71 aa0.66□□□□□ -2.3
CIC1YHR052W MMS1Q06211 1407 aa0.65□□□□□ -2.3
CIC1YHR052W YLR157W-EP0CF00 54 aa0.65□□□□□ -2.31
CIC1YHR052W TIM12P32830 109 aa0.65□□□□□ -2.31
CIC1YHR052W YBR032WP38223 100 aa0.65□□□□□ -2.31
CIC1YHR052W YSY6P38374 65 aa0.65□□□□□ -2.31
CIC1YHR052W OLI1P61829 76 aa0.65□□□□□ -2.31
CIC1YHR052W YOL164W-AQ3E7A5 60 aa0.65□□□□□ -2.31
CIC1YHR052W YLR307C-AQ3E825 87 aa0.65□□□□□ -2.31
CIC1YHR052W YIL134C-AQ45U18 67 aa0.65□□□□□ -2.31
CIC1YHR052W VPS15P22219 1454 aa0.65□□□□□ -2.31
CIC1YHR052W TY1B-DR5P0C2I2 1755 aa0.65□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms