RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W HKR1P41809 1802 aa-0.86□□□□□ -2.55
LOC1YFR001W HMRA1P0CY11 126 aa-0.86□□□□□ -2.55
LOC1YFR001W DNF3Q12674 1656 aa-0.86□□□□□ -2.55
LOC1YFR001W KSH1Q8TGJ3 72 aa-0.87□□□□□ -2.55
LOC1YFR001W RPS12P48589 143 aaKnown RBP-0.88□□□□□ -2.55
LOC1YFR001W BPH1P25356 2167 aa-0.89□□□□□ -2.55
LOC1YFR001W TSC11P40061 1430 aa-0.89□□□□□ -2.55
LOC1YFR001W GEA1P47102 1408 aaPredicted RBP-0.89□□□□□ -2.55
LOC1YFR001W TY1B-PR2P0C2J0 1756 aa-0.9□□□□□ -2.55
LOC1YFR001W TOM6P33448 61 aa-0.9□□□□□ -2.55
LOC1YFR001W YDR246W-AQ3E763 66 aa-0.9□□□□□ -2.55
LOC1YFR001W YGR025WP53216 100 aa-0.92□□□□□ -2.56
LOC1YFR001W RPS29AP41057 56 aaKnown RBP-0.93□□□□□ -2.56
LOC1YFR001W RRT15Q3E811 62 aa-0.93□□□□□ -2.56
LOC1YFR001W YER137CP40083 148 aaKnown RBP-0.94□□□□□ -2.56
LOC1YFR001W RGI1P40043 161 aaPredicted RBP-0.95□□□□□ -2.56
LOC1YFR001W SDH6Q3E785 79 aa-0.95□□□□□ -2.56
LOC1YFR001W PMD1P32634 1753 aa-0.96□□□□□ -2.56
LOC1YFR001W PDR11P40550 1411 aa-0.96□□□□□ -2.56
LOC1YFR001W SNU13P39990 126 aaKnown RBP-0.96□□□□□ -2.56
LOC1YFR001W BSC4P53841 131 aa-0.97□□□□□ -2.56
LOC1YFR001W YMR122W-AQ3E842 84 aa-0.97□□□□□ -2.56
LOC1YFR001W TY1B-DR6P0C2I3 1755 aa-0.98□□□□□ -2.57
LOC1YFR001W TY1B-LR2P0C2I5 1755 aa-0.98□□□□□ -2.57
LOC1YFR001W TY1B-JR2P47100 1755 aaKnown RBP-0.98□□□□□ -2.57
LOC1YFR001W TY1B-MR1Q04214 1755 aa-0.98□□□□□ -2.57
LOC1YFR001W TY1B-MR2Q04670 1755 aaKnown RBP-0.98□□□□□ -2.57
LOC1YFR001W TY1B-NL1Q12112 1755 aa-0.98□□□□□ -2.57
LOC1YFR001W TY1B-GR1Q12141 1755 aa-0.98□□□□□ -2.57
LOC1YFR001W TY1B-GR3Q12316 1755 aa-0.98□□□□□ -2.57
LOC1YFR001W TY1B-PLQ12414 1755 aaKnown RBP-0.98□□□□□ -2.57
LOC1YFR001W TY1B-ORQ92393 1755 aa-0.98□□□□□ -2.57
LOC1YFR001W YHR214C-DP0CX93 97 aa-0.98□□□□□ -2.57
LOC1YFR001W YAL065CO13511 128 aa-1.01□□□□□ -2.57
LOC1YFR001W ATP18P81450 59 aa-1.01□□□□□ -2.57
LOC1YFR001W STT4P37297 1900 aa-1.01□□□□□ -2.57
LOC1YFR001W ECM12O13529 151 aa-1.02□□□□□ -2.57
LOC1YFR001W GEA2P39993 1459 aaKnown RBP-1.02□□□□□ -2.57
LOC1YFR001W YPR117WQ06116 2489 aa-1.02□□□□□ -2.57
LOC1YFR001W TOR1P35169 2470 aa-1.03□□□□□ -2.57
LOC1YFR001W YMR001C-AQ8TGS9 76 aa-1.03□□□□□ -2.57
LOC1YFR001W REV3P14284 1504 aa-1.04□□□□□ -2.58
LOC1YFR001W ECM29P38737 1868 aa-1.06□□□□□ -2.58
LOC1YFR001W YBL044WP38194 122 aa-1.07□□□□□ -2.58
LOC1YFR001W YDR029WQ12111 104 aa-1.07□□□□□ -2.58
LOC1YFR001W RPA190P10964 1664 aaKnown RBP-1.07□□□□□ -2.58
LOC1YFR001W EDC1P53080 175 aaPredicted RBP-1.08□□□□□ -2.58
LOC1YFR001W NHP2P32495 156 aaPredicted RBP-1.09□□□□□ -2.58
LOC1YFR001W MSL1P40567 111 aaPredicted RBP-1.09□□□□□ -2.58
LOC1YFR001W FPR2P32472 135 aa-1.1□□□□□ -2.59
LOC1YFR001W FMP27Q06179 2628 aa-1.1□□□□□ -2.59
LOC1YFR001W YPR108W-AQ3E7B3 70 aa-1.11□□□□□ -2.59
LOC1YFR001W MMS1Q06211 1407 aa-1.12□□□□□ -2.59
LOC1YFR001W YCR085WP25650 117 aa-1.12□□□□□ -2.59
LOC1YFR001W YHR050W-AQ05451 56 aa-1.12□□□□□ -2.59
LOC1YFR001W MHF2Q3E829 80 aa-1.12□□□□□ -2.59
LOC1YFR001W TY1B-DR5P0C2I2 1755 aa-1.12□□□□□ -2.59
LOC1YFR001W TY1B-PR1P0C2I9 1755 aaKnown RBP-1.12□□□□□ -2.59
LOC1YFR001W TY1B-JR1P47098 1755 aa-1.12□□□□□ -2.59
LOC1YFR001W TY1B-ML2Q03434 1755 aaKnown RBP-1.12□□□□□ -2.59
LOC1YFR001W TY1B-ER1Q03612 1755 aa-1.12□□□□□ -2.59
LOC1YFR001W TY1B-ER2Q03619 1755 aa-1.12□□□□□ -2.59
LOC1YFR001W TY1B-DR1Q03855 1755 aa-1.12□□□□□ -2.59
LOC1YFR001W TY1B-ML1Q04711 1755 aaKnown RBP-1.12□□□□□ -2.59
LOC1YFR001W TY1B-LR1Q12088 1755 aaKnown RBP-1.12□□□□□ -2.59
LOC1YFR001W TY1B-GR2Q12269 1755 aa-1.12□□□□□ -2.59
LOC1YFR001W TY1B-OLQ12273 1755 aa-1.12□□□□□ -2.59
LOC1YFR001W TY1B-DR3Q99231 1755 aa-1.12□□□□□ -2.59
LOC1YFR001W MOT1P32333 1867 aa-1.12□□□□□ -2.59
LOC1YFR001W POL1P13382 1468 aa-1.12□□□□□ -2.59
LOC1YFR001W SUS1Q6WNK7 96 aa-1.13□□□□□ -2.59
LOC1YFR001W YBR032WP38223 100 aa-1.14□□□□□ -2.59
LOC1YFR001W YDR042CQ03205 200 aa-1.14□□□□□ -2.59
LOC1YFR001W PAU23Q07987 124 aa-1.14□□□□□ -2.59
LOC1YFR001W PAU17Q12370 124 aa-1.14□□□□□ -2.59
LOC1YFR001W MDS3P53094 1487 aa-1.14□□□□□ -2.59
LOC1YFR001W TOR2P32600 2474 aaKnown RBP-1.16□□□□□ -2.59
LOC1YFR001W TEL1P38110 2787 aa-1.17□□□□□ -2.6
LOC1YFR001W FYV7Q12247 151 aa-1.18□□□□□ -2.6
LOC1YFR001W YDR182W-AQ3E796 67 aa-1.18□□□□□ -2.6
LOC1YFR001W YOR008C-AQ3E7B9 74 aa-1.2□□□□□ -2.6
LOC1YFR001W SCP1Q08873 200 aa-1.21□□□□□ -2.6
LOC1YFR001W GDB1Q06625 1536 aa-1.21□□□□□ -2.6
LOC1YFR001W MDN1Q12019 4910 aaKnown RBP-1.21□□□□□ -2.6
LOC1YFR001W YKL018C-AQ3E7A7 99 aa-1.22□□□□□ -2.6
LOC1YFR001W YOL097W-AQ3E7Y9 61 aa-1.22□□□□□ -2.6
LOC1YFR001W GCN1P33892 2672 aaKnown RBP-1.22□□□□□ -2.61
LOC1YFR001W YKL068W-AQ3E826 78 aa-1.23□□□□□ -2.61
LOC1YFR001W NOP10Q6Q547 58 aaPredicted RBP-1.25□□□□□ -2.61
LOC1YFR001W MEC1P38111 2368 aa-1.27□□□□□ -2.61
LOC1YFR001W UTP10P42945 1769 aaKnown RBP-1.28□□□□□ -2.61
LOC1YFR001W SIP18P50263 79 aa-1.28□□□□□ -2.61
LOC1YFR001W TOS6P48560 102 aa-1.29□□□□□ -2.62
LOC1YFR001W TY2B-LR1P0C2J3 1770 aa-1.3□□□□□ -2.62
LOC1YFR001W TY2B-FP0CX63 1770 aa-1.3□□□□□ -2.62
LOC1YFR001W TY2B-GR2P0CX64 1770 aa-1.3□□□□□ -2.62
LOC1YFR001W TY2B-CP25384 1770 aa-1.3□□□□□ -2.62
LOC1YFR001W TY2B-DR2Q03494 1770 aa-1.3□□□□□ -2.62
LOC1YFR001W TY2B-DR3Q07791 1770 aaKnown RBP-1.3□□□□□ -2.62
LOC1YFR001W TY2B-OR1Q12113 1770 aa-1.3□□□□□ -2.62
Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms