RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W SGF11Q03067 99 aa-0.03□□□□□ -2.41
VPS52YDR484W ECM29P38737 1868 aa-0.03□□□□□ -2.41
VPS52YDR484W POL1P13382 1468 aa-0.03□□□□□ -2.41
VPS52YDR484W HKR1P41809 1802 aa-0.03□□□□□ -2.41
VPS52YDR484W AIM19P40502 157 aa-0.03□□□□□ -2.41
VPS52YDR484W MSL1P40567 111 aaPredicted RBP-0.03□□□□□ -2.41
VPS52YDR484W YNL042W-BQ3E7Z2 85 aa-0.03□□□□□ -2.41
VPS52YDR484W BPH1P25356 2167 aa-0.04□□□□□ -2.42
VPS52YDR484W STT4P37297 1900 aa-0.04□□□□□ -2.42
VPS52YDR484W FYV7Q12247 151 aa-0.04□□□□□ -2.42
VPS52YDR484W GEA1P47102 1408 aaPredicted RBP-0.04□□□□□ -2.42
VPS52YDR484W TY1B-DR6P0C2I3 1755 aa-0.04□□□□□ -2.42
VPS52YDR484W TY1B-LR2P0C2I5 1755 aa-0.04□□□□□ -2.42
VPS52YDR484W TY1B-JR2P47100 1755 aaKnown RBP-0.04□□□□□ -2.42
VPS52YDR484W TY1B-MR1Q04214 1755 aa-0.04□□□□□ -2.42
VPS52YDR484W TY1B-MR2Q04670 1755 aaKnown RBP-0.04□□□□□ -2.42
VPS52YDR484W TY1B-NL1Q12112 1755 aa-0.04□□□□□ -2.42
VPS52YDR484W TY1B-GR1Q12141 1755 aa-0.04□□□□□ -2.42
VPS52YDR484W TY1B-GR3Q12316 1755 aa-0.04□□□□□ -2.42
VPS52YDR484W TY1B-PLQ12414 1755 aaKnown RBP-0.04□□□□□ -2.42
VPS52YDR484W TY1B-ORQ92393 1755 aa-0.04□□□□□ -2.42
VPS52YDR484W REV3P14284 1504 aa-0.04□□□□□ -2.42
VPS52YDR484W YHL005CP38752 130 aa-0.05□□□□□ -2.42
VPS52YDR484W YDR029WQ12111 104 aa-0.05□□□□□ -2.42
VPS52YDR484W YMR122W-AQ3E842 84 aa-0.05□□□□□ -2.42
VPS52YDR484W TY1B-DR5P0C2I2 1755 aa-0.05□□□□□ -2.42
VPS52YDR484W TY1B-PR1P0C2I9 1755 aaKnown RBP-0.05□□□□□ -2.42
VPS52YDR484W TY1B-ER2Q03619 1755 aa-0.05□□□□□ -2.42
VPS52YDR484W TY1B-DR1Q03855 1755 aa-0.05□□□□□ -2.42
VPS52YDR484W TY1B-ML1Q04711 1755 aaKnown RBP-0.05□□□□□ -2.42
VPS52YDR484W TY1B-LR1Q12088 1755 aaKnown RBP-0.05□□□□□ -2.42
VPS52YDR484W TY1B-GR2Q12269 1755 aa-0.05□□□□□ -2.42
VPS52YDR484W RPL38P49167 78 aaKnown RBP-0.05□□□□□ -2.42
VPS52YDR484W PAU23Q07987 124 aa-0.05□□□□□ -2.42
VPS52YDR484W PAU17Q12370 124 aa-0.05□□□□□ -2.42
VPS52YDR484W SEN1Q00416 2231 aaKnown RBP-0.05□□□□□ -2.42
VPS52YDR484W MDS3P53094 1487 aa-0.06□□□□□ -2.42
VPS52YDR484W COX7P10174 60 aa-0.06□□□□□ -2.42
VPS52YDR484W BSC4P53841 131 aa-0.06□□□□□ -2.42
VPS52YDR484W YDR042CQ03205 200 aa-0.06□□□□□ -2.42
VPS52YDR484W TY1B-DR3Q99231 1755 aa-0.06□□□□□ -2.42
VPS52YDR484W GEA2P39993 1459 aaKnown RBP-0.06□□□□□ -2.42
VPS52YDR484W SNU13P39990 126 aaKnown RBP-0.07□□□□□ -2.42
VPS52YDR484W YCR108CQ3E819 63 aa-0.07□□□□□ -2.42
VPS52YDR484W PDR10P51533 1564 aa-0.07□□□□□ -2.42
VPS52YDR484W PMD1P32634 1753 aa-0.07□□□□□ -2.42
VPS52YDR484W UTP10P42945 1769 aaKnown RBP-0.07□□□□□ -2.42
VPS52YDR484W GDB1Q06625 1536 aa-0.07□□□□□ -2.42
VPS52YDR484W YAL065CO13511 128 aa-0.07□□□□□ -2.42
VPS52YDR484W YHR214C-DP0CX93 97 aa-0.07□□□□□ -2.42
VPS52YDR484W SWR1Q05471 1514 aa-0.08□□□□□ -2.42
VPS52YDR484W FPR2P32472 135 aa-0.08□□□□□ -2.42
VPS52YDR484W ATP18P81450 59 aa-0.08□□□□□ -2.42
VPS52YDR484W YIL156W-BQ2V2P4 73 aa-0.08□□□□□ -2.42
VPS52YDR484W TY1B-JR1P47098 1755 aa-0.09□□□□□ -2.42
VPS52YDR484W TY1B-ML2Q03434 1755 aaKnown RBP-0.09□□□□□ -2.42
VPS52YDR484W TY1B-ER1Q03612 1755 aa-0.09□□□□□ -2.42
VPS52YDR484W TY1B-OLQ12273 1755 aa-0.09□□□□□ -2.42
VPS52YDR484W PDX3P38075 228 aaKnown RBP-0.09□□□□□ -2.42
VPS52YDR484W ZEO1Q08245 113 aa-0.09□□□□□ -2.42
VPS52YDR484W SCP1Q08873 200 aa-0.09□□□□□ -2.42
VPS52YDR484W SDH6Q3E785 79 aa-0.09□□□□□ -2.42
VPS52YDR484W MHF2Q3E829 80 aa-0.09□□□□□ -2.42
VPS52YDR484W YCR075W-AQ3E830 75 aa-0.09□□□□□ -2.42
VPS52YDR484W SUS1Q6WNK7 96 aa-0.09□□□□□ -2.42
VPS52YDR484W TOM6P33448 61 aa-0.09□□□□□ -2.42
VPS52YDR484W ATX1P38636 73 aa-0.09□□□□□ -2.42
VPS52YDR484W YDR381C-AQ3E6R5 114 aa-0.09□□□□□ -2.42
VPS52YDR484W NOP10Q6Q547 58 aaPredicted RBP-0.09□□□□□ -2.42
VPS52YDR484W YGL194C-AQ2V2P6 80 aa-0.1□□□□□ -2.43
VPS52YDR484W UTP20P35194 2493 aaKnown RBP-0.1□□□□□ -2.43
VPS52YDR484W YPL225WQ08971 146 aaKnown RBP-0.11□□□□□ -2.43
VPS52YDR484W MOT1P32333 1867 aa-0.11□□□□□ -2.43
VPS52YDR484W YMR082CQ04276 118 aa-0.11□□□□□ -2.43
VPS52YDR484W YPR108W-AQ3E7B3 70 aa-0.11□□□□□ -2.43
VPS52YDR484W YCL001W-BQ96VH2 84 aa-0.11□□□□□ -2.43
VPS52YDR484W YPR145C-AQ2V2P0 78 aa-0.12□□□□□ -2.43
VPS52YDR484W ECM12O13529 151 aa-0.13□□□□□ -2.43
VPS52YDR484W XRN1P22147 1528 aaKnown RBP-0.13□□□□□ -2.43
VPS52YDR484W YCR085WP25650 117 aa-0.13□□□□□ -2.43
VPS52YDR484W YMR175W-AQ3E766 64 aa-0.13□□□□□ -2.43
VPS52YDR484W SIN3P22579 1536 aa-0.14□□□□□ -2.43
VPS52YDR484W YDL022C-AP0C5L6 82 aa-0.14□□□□□ -2.43
VPS52YDR484W YBL044WP38194 122 aa-0.14□□□□□ -2.43
VPS52YDR484W YDR246W-AQ3E763 66 aa-0.14□□□□□ -2.43
VPS52YDR484W CWP2P43497 92 aa-0.15□□□□□ -2.43
VPS52YDR484W YSP2Q06681 1438 aa-0.15□□□□□ -2.43
VPS52YDR484W TY2B-LR1P0C2J3 1770 aa-0.15□□□□□ -2.43
VPS52YDR484W TY2B-FP0CX63 1770 aa-0.15□□□□□ -2.43
VPS52YDR484W TY2B-GR2P0CX64 1770 aa-0.15□□□□□ -2.43
VPS52YDR484W TY2B-CP25384 1770 aa-0.15□□□□□ -2.43
VPS52YDR484W TY2B-DR2Q03494 1770 aa-0.15□□□□□ -2.43
VPS52YDR484W TY2B-DR3Q07791 1770 aaKnown RBP-0.15□□□□□ -2.43
VPS52YDR484W TY2B-OR1Q12113 1770 aa-0.15□□□□□ -2.43
VPS52YDR484W TY2B-DR1Q12472 1770 aa-0.15□□□□□ -2.43
VPS52YDR484W TY2B-BQ12491 1770 aa-0.15□□□□□ -2.43
VPS52YDR484W TY2B-OR2Q12501 1770 aa-0.15□□□□□ -2.43
VPS52YDR484W YOR105WQ08504 108 aa-0.15□□□□□ -2.43
VPS52YDR484W POC4Q12245 148 aaPredicted RBP-0.15□□□□□ -2.43
VPS52YDR484W ESC1Q03661 1658 aaKnown RBP-0.16□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms