RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C FRQ1Q06389 190 aa0.89□□□□□ -2.27
LSM6YDR378C YPL261CQ08976 102 aa0.89□□□□□ -2.27
LSM6YDR378C CYB5P40312 120 aa0.88□□□□□ -2.27
LSM6YDR378C PAU12P53343 120 aa0.88□□□□□ -2.27
LSM6YDR378C SPC24Q04477 213 aa0.88□□□□□ -2.27
LSM6YDR378C YOR097CQ12274 175 aaPredicted RBP0.88□□□□□ -2.27
LSM6YDR378C YLR118CQ12354 227 aa0.88□□□□□ -2.27
LSM6YDR378C YLR285C-AQ3E771 56 aa0.88□□□□□ -2.27
LSM6YDR378C MEC1P38111 2368 aa0.86□□□□□ -2.27
LSM6YDR378C AUA1P32450 94 aa0.85□□□□□ -2.27
LSM6YDR378C COX23P38824 151 aa0.85□□□□□ -2.27
LSM6YDR378C RPB11P38902 120 aa0.85□□□□□ -2.27
LSM6YDR378C YLR099W-AQ3E798 87 aa0.85□□□□□ -2.27
LSM6YDR378C MYO1P08964 1928 aa0.84□□□□□ -2.27
LSM6YDR378C YHR130CP38834 111 aa0.84□□□□□ -2.27
LSM6YDR378C TDA2P40045 126 aa0.84□□□□□ -2.27
LSM6YDR378C RPS29BP41058 56 aaKnown RBP0.84□□□□□ -2.27
LSM6YDR378C RPL22BP56628 122 aaKnown RBP0.84□□□□□ -2.27
LSM6YDR378C PCC1Q3E833 88 aa0.84□□□□□ -2.27
LSM6YDR378C YCR099CP25657 155 aa0.83□□□□□ -2.28
LSM6YDR378C YEA6P39953 335 aa0.83□□□□□ -2.28
LSM6YDR378C YLR363W-AQ3E747 85 aa0.83□□□□□ -2.28
LSM6YDR378C POL2P21951 2222 aaKnown RBP0.82□□□□□ -2.28
LSM6YDR378C YDR010CQ12426 110 aa0.81□□□□□ -2.28
LSM6YDR378C YER187WP40102 141 aa0.8□□□□□ -2.28
LSM6YDR378C VPS55P47111 140 aa0.8□□□□□ -2.28
LSM6YDR378C SNN1P48232 102 aa0.79□□□□□ -2.28
LSM6YDR378C YIR020CP40575 100 aa0.78□□□□□ -2.28
LSM6YDR378C MRPS12P53732 153 aa0.78□□□□□ -2.28
LSM6YDR378C DAD1Q12248 94 aa0.78□□□□□ -2.28
LSM6YDR378C MOT1P32333 1867 aa0.78□□□□□ -2.29
LSM6YDR378C BRR2P32639 2163 aaKnown RBP0.77□□□□□ -2.29
LSM6YDR378C APS2Q00381 147 aa0.74□□□□□ -2.29
LSM6YDR378C HMRA2P0CY13 119 aa0.73□□□□□ -2.29
LSM6YDR378C PAU24P38155 120 aa0.73□□□□□ -2.29
LSM6YDR378C GTT1P40582 234 aa0.73□□□□□ -2.29
LSM6YDR378C Q0297Q9ZZV8 51 aa0.73□□□□□ -2.29
LSM6YDR378C MLP1Q02455 1875 aaKnown RBP0.72□□□□□ -2.29
LSM6YDR378C CCW14O13547 238 aa0.72□□□□□ -2.29
LSM6YDR378C PAM16P42949 149 aa0.72□□□□□ -2.29
LSM6YDR378C YBR072C-AQ3E794 53 aa0.72□□□□□ -2.29
LSM6YDR378C PAU2P32612 120 aa0.71□□□□□ -2.3
LSM6YDR378C YAR029WP39549 74 aa0.71□□□□□ -2.3
LSM6YDR378C YLR365WQ7LIF2 110 aa0.7□□□□□ -2.3
LSM6YDR378C YHR173CP38864 112 aa0.69□□□□□ -2.3
LSM6YDR378C YLR042CQ07990 161 aa0.69□□□□□ -2.3
LSM6YDR378C YCL048W-AQ2V2Q2 79 aa0.69□□□□□ -2.3
LSM6YDR378C RTR2Q12378 196 aa0.67□□□□□ -2.3
LSM6YDR378C WIP1Q2V2P8 89 aa0.67□□□□□ -2.3
LSM6YDR378C YOL164W-AQ3E7A5 60 aa0.67□□□□□ -2.3
LSM6YDR378C PAU19P0CE85 124 aa0.66□□□□□ -2.3
LSM6YDR378C PAU3P25610 124 aa0.66□□□□□ -2.3
LSM6YDR378C STT4P37297 1900 aa0.66□□□□□ -2.3
LSM6YDR378C YIL086CP40503 102 aa0.64□□□□□ -2.31
LSM6YDR378C RPS27AP35997 82 aaKnown RBP0.63□□□□□ -2.31
LSM6YDR378C RPS27BP38711 82 aa0.63□□□□□ -2.31
LSM6YDR378C LSM6Q06406 86 aaKnown RBP0.63□□□□□ -2.31
LSM6YDR378C YIR021W-AQ3E739 70 aa0.63□□□□□ -2.31
LSM6YDR378C GCV3P39726 170 aaPredicted RBP0.61□□□□□ -2.31
LSM6YDR378C YLR255CO13574 117 aa0.6□□□□□ -2.31
LSM6YDR378C SWC7Q06707 132 aa0.6□□□□□ -2.31
LSM6YDR378C ADK1P07170 222 aaKnown RBP0.59□□□□□ -2.31
LSM6YDR378C HUR1P45820 110 aa0.59□□□□□ -2.31
LSM6YDR378C MIX14Q04341 121 aa0.59□□□□□ -2.31
LSM6YDR378C YOL118CQ08259 102 aa0.59□□□□□ -2.31
LSM6YDR378C BPH1P25356 2167 aa0.59□□□□□ -2.32
LSM6YDR378C SHU1P38751 150 aa0.58□□□□□ -2.32
LSM6YDR378C IMP2P46972 177 aa0.58□□□□□ -2.32
LSM6YDR378C YGR035W-AQ45U48 73 aa0.57□□□□□ -2.32
LSM6YDR378C YHR138CP38841 114 aaPredicted RBP0.56□□□□□ -2.32
LSM6YDR378C VMA21P41806 77 aa0.56□□□□□ -2.32
LSM6YDR378C YGR164WP53291 111 aa0.56□□□□□ -2.32
LSM6YDR378C COX19Q3E731 98 aa0.56□□□□□ -2.32
LSM6YDR378C YFR010W-AP0C5N0 62 aa0.55□□□□□ -2.32
LSM6YDR378C PAU15P40585 124 aa0.53□□□□□ -2.32
LSM6YDR378C PAU16P35994 123 aa0.52□□□□□ -2.33
LSM6YDR378C RPL39P04650 51 aa0.51□□□□□ -2.33
LSM6YDR378C YHR214C-DP0CX93 97 aa0.5□□□□□ -2.33
LSM6YDR378C MPC2P38857 129 aa0.5□□□□□ -2.33
LSM6YDR378C YDR210WQ03482 75 aa0.5□□□□□ -2.33
LSM6YDR378C YOR032W-AQ8TGS1 66 aa0.5□□□□□ -2.33
LSM6YDR378C YPL038W-AQ3E7B4 63 aa0.49□□□□□ -2.33
LSM6YDR378C YOR304C-AO14468 76 aa0.48□□□□□ -2.33
LSM6YDR378C YER039C-AP0CD97 72 aa0.48□□□□□ -2.33
LSM6YDR378C BUD23P25627 275 aaPredicted RBP0.48□□□□□ -2.33
LSM6YDR378C SRB6P32570 121 aa0.47□□□□□ -2.33
LSM6YDR378C SIP18P50263 79 aa0.46□□□□□ -2.34
LSM6YDR378C YCR101CP25607 182 aa0.45□□□□□ -2.34
LSM6YDR378C RPA12P32529 125 aaKnown RBP0.45□□□□□ -2.34
LSM6YDR378C COX12Q01519 83 aa0.45□□□□□ -2.34
LSM6YDR378C YMR105W-AQ8TGS8 64 aa0.45□□□□□ -2.34
LSM6YDR378C YNL190WP53872 204 aa0.44□□□□□ -2.34
LSM6YDR378C NCE101Q02820 53 aa0.43□□□□□ -2.34
LSM6YDR378C YOS1Q3E834 85 aa0.42□□□□□ -2.34
LSM6YDR378C RPS11AP0CX47 156 aaKnown RBP0.4□□□□□ -2.35
LSM6YDR378C RPS11BP0CX48 156 aaKnown RBP0.4□□□□□ -2.35
LSM6YDR378C YER137CP40083 148 aaKnown RBP0.4□□□□□ -2.35
LSM6YDR378C GNA1P43577 159 aaPredicted RBP0.39□□□□□ -2.35
LSM6YDR378C YGR025WP53216 100 aa0.39□□□□□ -2.35
LSM6YDR378C HOR7Q05827 59 aa0.39□□□□□ -2.35
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms