RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W RPL2BP0CX46 254 aaKnown RBP3.11□□□□□ -1.91
HSP42YDR171W HUR1P45820 110 aa3.11□□□□□ -1.91
HSP42YDR171W YNL046WP53956 172 aa3.11□□□□□ -1.91
HSP42YDR171W YSY6P38374 65 aa3.1□□□□□ -1.91
HSP42YDR171W SHU1P38751 150 aa3.1□□□□□ -1.91
HSP42YDR171W KEG1P43614 200 aa3.1□□□□□ -1.91
HSP42YDR171W YNL190WP53872 204 aa3.1□□□□□ -1.91
HSP42YDR171W YBR200W-AQ3E755 54 aa3.1□□□□□ -1.91
HSP42YDR171W KTI11Q3E840 82 aa3.1□□□□□ -1.91
HSP42YDR171W RPL16AP26784 199 aaKnown RBP3.09□□□□□ -1.91
HSP42YDR171W RPL16BP26785 198 aaKnown RBP3.09□□□□□ -1.91
HSP42YDR171W IES6P32617 166 aa3.09□□□□□ -1.91
HSP42YDR171W SVP26P38869 228 aa3.09□□□□□ -1.91
HSP42YDR171W PBP4Q07362 185 aaKnown RBP3.09□□□□□ -1.91
HSP42YDR171W IRA2P19158 3079 aa3.08□□□□□ -1.92
HSP42YDR171W YCR050CP25630 102 aa3.08□□□□□ -1.92
HSP42YDR171W YHL018WP38744 120 aaPredicted RBP3.08□□□□□ -1.92
HSP42YDR171W YHR022CP38763 256 aa3.08□□□□□ -1.92
HSP42YDR171W CTR2P38865 189 aa3.08□□□□□ -1.92
HSP42YDR171W RRT13P40042 185 aa3.08□□□□□ -1.92
HSP42YDR171W CCW12Q12127 133 aa3.08□□□□□ -1.92
HSP42YDR171W NRM1P53718 249 aa3.07□□□□□ -1.92
HSP42YDR171W RGM1Q00453 211 aa3.07□□□□□ -1.92
HSP42YDR171W SED1Q01589 338 aa3.07□□□□□ -1.92
HSP42YDR171W YOR020W-AQ3E824 90 aa3.07□□□□□ -1.92
HSP42YDR171W YHL037CP38733 133 aa3.06□□□□□ -1.92
HSP42YDR171W ERG28P40030 148 aa3.06□□□□□ -1.92
HSP42YDR171W YER187WP40102 141 aa3.06□□□□□ -1.92
HSP42YDR171W CSF1Q12150 2958 aa3.06□□□□□ -1.92
HSP42YDR171W YLR412C-AQ3E742 68 aa3.06□□□□□ -1.92
HSP42YDR171W FMP27Q06179 2628 aa3.05□□□□□ -1.92
HSP42YDR171W YEL008WP40001 126 aa3.05□□□□□ -1.92
HSP42YDR171W ARC15P40518 154 aaRIP-Chip data3.05□□□□□ -1.92not detected
HSP42YDR171W YGR164WP53291 111 aa3.05□□□□□ -1.92
HSP42YDR171W YLR042CQ07990 161 aa3.05□□□□□ -1.92
HSP42YDR171W YKL183C-AQ3E765 70 aa3.05□□□□□ -1.92
HSP42YDR171W YNL146C-AQ3E7Z1 64 aa3.05□□□□□ -1.92
HSP42YDR171W YLR236CA0A023PZG4 107 aa3.04□□□□□ -1.92
HSP42YDR171W YAR029WP39549 74 aa3.04□□□□□ -1.92
HSP42YDR171W YNL194CP40169 301 aa3.04□□□□□ -1.92
HSP42YDR171W ALG13P53178 202 aa3.04□□□□□ -1.92
HSP42YDR171W IRC21Q04772 201 aa3.04□□□□□ -1.92
HSP42YDR171W YMR175W-AQ3E766 64 aa3.04□□□□□ -1.92
HSP42YDR171W YLR285C-AQ3E771 56 aa3.04□□□□□ -1.92
HSP42YDR171W YOL085CQ99345 113 aa3.04□□□□□ -1.92
HSP42YDR171W YJR107C-AP0CT86 78 aa3.03□□□□□ -1.92
HSP42YDR171W YBR209WP38311 105 aa3.03□□□□□ -1.92
HSP42YDR171W YGR025WP53216 100 aa3.03□□□□□ -1.92
HSP42YDR171W YCL048W-AQ2V2Q2 79 aa3.03□□□□□ -1.92
HSP42YDR171W UBC4P15731 148 aa3.02□□□□□ -1.93
HSP42YDR171W BET1P22804 142 aa3.02□□□□□ -1.93
HSP42YDR171W KSH1Q8TGJ3 72 aa3.02□□□□□ -1.93
HSP42YDR171W YLR156WP0CE96 114 aa3.01□□□□□ -1.93
HSP42YDR171W YLR159WP0CE97 114 aa3.01□□□□□ -1.93
HSP42YDR171W YLR161WP0CE98 114 aa3.01□□□□□ -1.93
HSP42YDR171W YRA2P36036 203 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
HSP42YDR171W AIM4P38305 123 aaPredicted RBP3.01□□□□□ -1.93
HSP42YDR171W IGD1P43598 195 aa3.01□□□□□ -1.93
HSP42YDR171W YGL088WP53151 121 aa3.01□□□□□ -1.93
HSP42YDR171W RSM19P53733 91 aaPredicted RBP3.01□□□□□ -1.93
HSP42YDR171W YDR246W-AQ3E763 66 aa3.01□□□□□ -1.93
HSP42YDR171W YER135CP40082 130 aa3□□□□□ -1.93
HSP42YDR171W GAT4P40569 121 aa3□□□□□ -1.93
HSP42YDR171W ATP18P81450 59 aa3□□□□□ -1.93
HSP42YDR171W PMP3P87284 55 aa3□□□□□ -1.93
HSP42YDR171W ATP20Q12233 115 aa3□□□□□ -1.93
HSP42YDR171W YOR011W-AQ3E807 68 aa3□□□□□ -1.93
HSP42YDR171W YFR035CP43608 114 aa2.99□□□□□ -1.93
HSP42YDR171W YPS5P53057 165 aa2.99□□□□□ -1.93
HSP42YDR171W YMR295CQ03559 197 aa2.99□□□□□ -1.93
HSP42YDR171W YPR013CQ12145 317 aa2.99□□□□□ -1.93
HSP42YDR171W YOR034C-AQ3E735 80 aa2.99□□□□□ -1.93
HSP42YDR171W SPO24Q3E752 67 aa2.99□□□□□ -1.93
HSP42YDR171W YLL006W-AQ3E814 58 aa2.99□□□□□ -1.93
HSP42YDR171W YAL065CO13511 128 aa2.98□□□□□ -1.93
HSP42YDR171W SPS100P13130 326 aa2.98□□□□□ -1.93
HSP42YDR171W YMR244WQ04018 355 aa2.98□□□□□ -1.93
HSP42YDR171W SPG4Q04438 115 aa2.98□□□□□ -1.93
HSP42YDR171W VAM10Q08474 114 aa2.98□□□□□ -1.93
HSP42YDR171W MPC3P53311 146 aa2.97□□□□□ -1.93
HSP42YDR171W MRPS8Q03799 155 aa2.97□□□□□ -1.93
HSP42YDR171W ICY1Q04329 127 aa2.97□□□□□ -1.93
HSP42YDR171W YOR314WQ12506 109 aa2.97□□□□□ -1.93
HSP42YDR171W TSC3Q3E790 80 aa2.97□□□□□ -1.93
HSP42YDR171W YDR182W-AQ3E796 67 aa2.97□□□□□ -1.93
HSP42YDR171W RPL29P05747 59 aaPredicted RBP2.96□□□□□ -1.94
HSP42YDR171W TOS8P53147 276 aa2.96□□□□□ -1.94
HSP42YDR171W MMS2P53152 137 aa2.96□□□□□ -1.94
HSP42YDR171W YDR115WQ04598 105 aa2.96□□□□□ -1.94
HSP42YDR171W YNL277W-AQ3E7Z0 62 aa2.96□□□□□ -1.94
HSP42YDR171W YDR034W-BQ6Q5X2 51 aa2.96□□□□□ -1.94
HSP42YDR171W YPR117WQ06116 2489 aa2.96□□□□□ -1.94
HSP42YDR171W RPL36BO14455 100 aaKnown RBP2.95□□□□□ -1.94
HSP42YDR171W RPL36AP05745 100 aaPredicted RBP2.95□□□□□ -1.94
HSP42YDR171W YBR219CP38317 127 aa2.95□□□□□ -1.94
HSP42YDR171W TDA2P40045 126 aa2.95□□□□□ -1.94
HSP42YDR171W EDC1P53080 175 aaPredicted RBP2.95□□□□□ -1.94
HSP42YDR171W ERI1P62651 68 aaKnown RBP2.95□□□□□ -1.94
HSP42YDR171W YDL012CQ12489 107 aa2.95□□□□□ -1.94
HSP42YDR171W TDA8Q6B2U8 126 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms