RNA–Protein interactions for RNA: YDL116W

NUP84, Transcript of Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC), yeastyeast

Gene NUP84, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP84YDL116W KNH1P50112 268 aa5.21□□□□□ -1.58
NUP84YDL116W YDR119W-AQ2V2P9 66 aa5.21□□□□□ -1.58
NUP84YDL116W KRE1P17260 313 aa5.2□□□□□ -1.58
NUP84YDL116W YBR219CP38317 127 aa5.2□□□□□ -1.58
NUP84YDL116W YNL194CP40169 301 aa5.2□□□□□ -1.58
NUP84YDL116W MRPS8Q03799 155 aa5.2□□□□□ -1.58
NUP84YDL116W PPT2Q12036 173 aa5.19□□□□□ -1.58
NUP84YDL116W YER145C-AA0A023PYF4 145 aa5.19□□□□□ -1.58
NUP84YDL116W RAD6P06104 172 aa5.19□□□□□ -1.58
NUP84YDL116W EDC1P53080 175 aaPredicted RBP5.19□□□□□ -1.58
NUP84YDL116W COF1Q03048 143 aaKnown RBP5.18□□□□□ -1.58
NUP84YDL116W SMP1P38128 452 aa5.18□□□□□ -1.58
NUP84YDL116W SRL1Q08673 210 aa5.18□□□□□ -1.58
NUP84YDL116W YDR029WQ12111 104 aa5.18□□□□□ -1.58
NUP84YDL116W YDR381C-AQ3E6R5 114 aa5.18□□□□□ -1.58
NUP84YDL116W RPS11AP0CX47 156 aaKnown RBP5.17□□□□□ -1.58
NUP84YDL116W RPS11BP0CX48 156 aaKnown RBP5.17□□□□□ -1.58
NUP84YDL116W CCW14O13547 238 aa5.16□□□□□ -1.58
NUP84YDL116W MRPL24P36525 258 aaPredicted RBP5.16□□□□□ -1.58
NUP84YDL116W SPG4Q04438 115 aa5.16□□□□□ -1.58
NUP84YDL116W YCH1P42937 148 aa5.15□□□□□ -1.58
NUP84YDL116W ENV10Q99382 181 aa5.15□□□□□ -1.58
NUP84YDL116W Q0297Q9ZZV8 51 aa5.15□□□□□ -1.58
NUP84YDL116W SVP26P38869 228 aa5.15□□□□□ -1.59
NUP84YDL116W ARC15P40518 154 aaRIP-Chip data5.15□□□□□ -1.59 RIP-Chip
NUP84YDL116W YDL186WP48568 277 aa5.15□□□□□ -1.59
NUP84YDL116W YCR001WP25347 104 aa5.14□□□□□ -1.59
NUP84YDL116W YCR085WP25650 117 aa5.14□□□□□ -1.59
NUP84YDL116W PMP3P87284 55 aa5.14□□□□□ -1.59
NUP84YDL116W YLR281CQ05863 155 aa5.14□□□□□ -1.59
NUP84YDL116W YLL006W-AQ3E814 58 aa5.14□□□□□ -1.59
NUP84YDL116W PRP8P33334 2413 aaKnown RBP5.13□□□□□ -1.59
NUP84YDL116W YHL018WP38744 120 aaPredicted RBP5.13□□□□□ -1.59
NUP84YDL116W MPC2P38857 129 aa5.13□□□□□ -1.59
NUP84YDL116W MPC3P53311 146 aa5.13□□□□□ -1.59
NUP84YDL116W RGM1Q00453 211 aa5.12□□□□□ -1.59
NUP84YDL116W VAM10Q08474 114 aa5.12□□□□□ -1.59
NUP84YDL116W QCR8P08525 94 aa5.11□□□□□ -1.59
NUP84YDL116W UBC5P15732 148 aa5.11□□□□□ -1.59
NUP84YDL116W MSA2P36157 363 aa5.09□□□□□ -1.59
NUP84YDL116W COX14P39103 70 aa5.09□□□□□ -1.59
NUP84YDL116W YPS5P53057 165 aa5.09□□□□□ -1.59
NUP84YDL116W YHL042WP38729 150 aa5.08□□□□□ -1.6
NUP84YDL116W RPL38P49167 78 aaKnown RBP5.08□□□□□ -1.6
NUP84YDL116W ALG13P53178 202 aa5.08□□□□□ -1.6
NUP84YDL116W YLR285C-AQ3E771 56 aa5.08□□□□□ -1.6
NUP84YDL116W YLR361C-AQ3E795 98 aa5.08□□□□□ -1.6
NUP84YDL116W YJR107C-AP0CT86 78 aa5.07□□□□□ -1.6
NUP84YDL116W COX12Q01519 83 aa5.07□□□□□ -1.6
NUP84YDL116W EMC6Q12431 108 aa5.07□□□□□ -1.6
NUP84YDL116W YHR212W-AP0CX91 67 aa5.06□□□□□ -1.6
NUP84YDL116W RPR2P40571 144 aa5.06□□□□□ -1.6
NUP84YDL116W RPL2AP0CX45 254 aaKnown RBP5.06□□□□□ -1.6
NUP84YDL116W RPL2BP0CX46 254 aaKnown RBP5.06□□□□□ -1.6
NUP84YDL116W IRC21Q04772 201 aa5.06□□□□□ -1.6
NUP84YDL116W YIR021W-AQ3E739 70 aa5.05□□□□□ -1.6
NUP84YDL116W YLR156WP0CE96 114 aa5.04□□□□□ -1.6
NUP84YDL116W YLR159WP0CE97 114 aa5.04□□□□□ -1.6
NUP84YDL116W YLR161WP0CE98 114 aa5.04□□□□□ -1.6
NUP84YDL116W SMD1Q02260 146 aaPredicted RBP5.04□□□□□ -1.6
NUP84YDL116W ECM12O13529 151 aa5.03□□□□□ -1.6
NUP84YDL116W YBL081WP38180 368 aaKnown RBP5.03□□□□□ -1.6
NUP84YDL116W YLR236CA0A023PZG4 107 aa5.02□□□□□ -1.61
NUP84YDL116W YPL038W-AQ3E7B4 63 aa5.02□□□□□ -1.61
NUP84YDL116W YRA2P36036 203 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
NUP84YDL116W YSY6P38374 65 aa5.02□□□□□ -1.61
NUP84YDL116W YAL064WP39711 94 aa5.02□□□□□ -1.61
NUP84YDL116W CRC1Q12289 327 aa5.02□□□□□ -1.61
NUP84YDL116W YAL065CO13511 128 aa5.01□□□□□ -1.61
NUP84YDL116W MEC1P38111 2368 aa5.01□□□□□ -1.61
NUP84YDL116W YER039C-AP0CD97 72 aa5.01□□□□□ -1.61
NUP84YDL116W RPB9P27999 122 aa5□□□□□ -1.61
NUP84YDL116W ATP18P81450 59 aa5□□□□□ -1.61
NUP84YDL116W YOR020W-AQ3E824 90 aa4.99□□□□□ -1.61
NUP84YDL116W YFR009W-AP0C5M9 85 aa4.98□□□□□ -1.61
NUP84YDL116W YCR050CP25630 102 aa4.98□□□□□ -1.61
NUP84YDL116W YER187WP40102 141 aa4.98□□□□□ -1.61
NUP84YDL116W YMR122W-AQ3E842 84 aa4.98□□□□□ -1.61
NUP84YDL116W RRT15Q3E811 62 aa4.97□□□□□ -1.61
NUP84YDL116W MVB12P42939 101 aa4.96□□□□□ -1.62
NUP84YDL116W YMR320WQ04897 101 aa4.96□□□□□ -1.62
NUP84YDL116W YDR246W-AQ3E763 66 aa4.96□□□□□ -1.62
NUP84YDL116W TOM6P33448 61 aa4.95□□□□□ -1.62
NUP84YDL116W RSM18P40033 138 aa4.95□□□□□ -1.62
NUP84YDL116W ICY1Q04329 127 aa4.95□□□□□ -1.62
NUP84YDL116W YOL014WQ08110 124 aa4.94□□□□□ -1.62
NUP84YDL116W ATP20Q12233 115 aa4.94□□□□□ -1.62
NUP84YDL116W UTP20P35194 2493 aaKnown RBP4.94□□□□□ -1.62
NUP84YDL116W IGD1P43598 195 aa4.93□□□□□ -1.62
NUP84YDL116W SHH4Q06236 168 aa4.93□□□□□ -1.62
NUP84YDL116W YAR029WP39549 74 aa4.92□□□□□ -1.62
NUP84YDL116W YDR274CP87283 123 aa4.92□□□□□ -1.62
NUP84YDL116W AIM4P38305 123 aaPredicted RBP4.91□□□□□ -1.62
NUP84YDL116W TDA2P40045 126 aa4.91□□□□□ -1.62
NUP84YDL116W AQY2P0CD90 149 aa4.91□□□□□ -1.62
NUP84YDL116W ERI1P62651 68 aaKnown RBP4.91□□□□□ -1.62
NUP84YDL116W YNL162W-AQ3E7A8 72 aa4.91□□□□□ -1.62
NUP84YDL116W NOP10Q6Q547 58 aaPredicted RBP4.91□□□□□ -1.62
NUP84YDL116W ERG28P40030 148 aa4.9□□□□□ -1.62
NUP84YDL116W RPL43AP0CX25 92 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms