RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C RPL16BP26785 198 aaKnown RBP4.36□□□□□ -1.71
MDH3YDL078C YRA2P36036 203 aaKnown RBP RIP-Chip data4.36□□□□□ -1.71not detected
MDH3YDL078C SFT2P38166 215 aa4.36□□□□□ -1.71
MDH3YDL078C TAR1Q8TGM6 124 aa4.36□□□□□ -1.71
MDH3YDL078C YLR302CO13544 120 aa4.35□□□□□ -1.71
MDH3YDL078C YHR213WP0CI67 198 aa4.35□□□□□ -1.71
MDH3YDL078C RPL18AP0CX49 186 aaKnown RBP4.35□□□□□ -1.71
MDH3YDL078C RPL18BP0CX50 186 aaKnown RBP4.35□□□□□ -1.71
MDH3YDL078C RPL32P38061 130 aaKnown RBP4.35□□□□□ -1.71
MDH3YDL078C DSE2P38844 325 aa4.35□□□□□ -1.71
MDH3YDL078C YHR173CP38864 112 aa4.35□□□□□ -1.71
MDH3YDL078C GLO1P50107 326 aa4.35□□□□□ -1.71
MDH3YDL078C PEX17P40155 199 aa4.34□□□□□ -1.71
MDH3YDL078C SIM1P40472 476 aa4.34□□□□□ -1.71
MDH3YDL078C YPL261CQ08976 102 aa4.34□□□□□ -1.71
MDH3YDL078C HSP12P22943 109 aaKnown RBP4.33□□□□□ -1.72
MDH3YDL078C AUA1P32450 94 aa4.33□□□□□ -1.72
MDH3YDL078C SPT4P32914 102 aaPredicted RBP4.33□□□□□ -1.72
MDH3YDL078C YER187WP40102 141 aa4.33□□□□□ -1.72
MDH3YDL078C IMP2P46972 177 aa4.33□□□□□ -1.72
MDH3YDL078C RPL42AP0CX27 106 aaKnown RBP4.32□□□□□ -1.72
MDH3YDL078C RPL42BP0CX28 106 aaKnown RBP4.32□□□□□ -1.72
MDH3YDL078C AIM19P40502 157 aa4.32□□□□□ -1.72
MDH3YDL078C YIA6P40556 373 aa4.32□□□□□ -1.72
MDH3YDL078C YOR011W-AQ3E807 68 aa4.32□□□□□ -1.72
MDH3YDL078C PFY1P07274 126 aa4.31□□□□□ -1.72
MDH3YDL078C GAT4P40569 121 aa4.31□□□□□ -1.72
MDH3YDL078C ATP23P53722 227 aa4.31□□□□□ -1.72
MDH3YDL078C YNR077CP53758 84 aa4.3□□□□□ -1.72
MDH3YDL078C YLR112WQ12130 139 aa4.3□□□□□ -1.72
MDH3YDL078C YNL146C-AQ3E7Z1 64 aa4.3□□□□□ -1.72
MDH3YDL078C VHS2P40463 436 aa4.29□□□□□ -1.72
MDH3YDL078C YOL160WQ08321 113 aa4.29□□□□□ -1.72
MDH3YDL078C PPT2Q12036 173 aa4.29□□□□□ -1.72
MDH3YDL078C PRM7Q12459 698 aa4.29□□□□□ -1.72
MDH3YDL078C RPL16AP26784 199 aaKnown RBP4.28□□□□□ -1.72
MDH3YDL078C YEL067CP39978 195 aa4.28□□□□□ -1.72
MDH3YDL078C MGR2Q02889 113 aa4.28□□□□□ -1.72
MDH3YDL078C YMR295CQ03559 197 aa4.28□□□□□ -1.72
MDH3YDL078C YMR244WQ04018 355 aa4.28□□□□□ -1.72
MDH3YDL078C PBA1Q05778 276 aa4.28□□□□□ -1.72
MDH3YDL078C TIM22Q12328 207 aa4.28□□□□□ -1.72
MDH3YDL078C PET8P38921 284 aa4.27□□□□□ -1.73
MDH3YDL078C RSM18P40033 138 aa4.27□□□□□ -1.73
MDH3YDL078C YGR025WP53216 100 aa4.27□□□□□ -1.73
MDH3YDL078C SMD1Q02260 146 aaPredicted RBP4.27□□□□□ -1.73
MDH3YDL078C YLR194CQ05777 254 aa4.27□□□□□ -1.73
MDH3YDL078C FIT2Q08906 153 aa4.27□□□□□ -1.73
MDH3YDL078C MIC10Q96VH5 97 aa4.27□□□□□ -1.73
MDH3YDL078C YER135CP40082 130 aa4.26□□□□□ -1.73
MDH3YDL078C SPI1P40092 148 aa4.26□□□□□ -1.73
MDH3YDL078C YFL019CP43576 117 aa4.26□□□□□ -1.73
MDH3YDL078C YFR035CP43608 114 aa4.26□□□□□ -1.73
MDH3YDL078C MRPS8Q03799 155 aa4.26□□□□□ -1.73
MDH3YDL078C ICY1Q04329 127 aa4.26□□□□□ -1.73
MDH3YDL078C RDS3Q06835 107 aaPredicted RBP4.26□□□□□ -1.73
MDH3YDL078C YHR022CP38763 256 aa4.25□□□□□ -1.73
MDH3YDL078C MIG3P39943 394 aa4.25□□□□□ -1.73
MDH3YDL078C DCV1P43595 202 aa4.25□□□□□ -1.73
MDH3YDL078C KEG1P43614 200 aa4.25□□□□□ -1.73
MDH3YDL078C TSC3Q3E790 80 aa4.25□□□□□ -1.73
MDH3YDL078C TDA8Q6B2U8 126 aa4.25□□□□□ -1.73
MDH3YDL078C AIM4P38305 123 aaPredicted RBP4.24□□□□□ -1.73
MDH3YDL078C ICS3P47034 131 aa4.24□□□□□ -1.73
MDH3YDL078C TOS6P48560 102 aa4.24□□□□□ -1.73
MDH3YDL078C CCW12Q12127 133 aa4.24□□□□□ -1.73
MDH3YDL078C RRT15Q3E811 62 aa4.24□□□□□ -1.73
MDH3YDL078C RPS11AP0CX47 156 aaKnown RBP4.23□□□□□ -1.73
MDH3YDL078C RPS11BP0CX48 156 aaKnown RBP4.23□□□□□ -1.73
MDH3YDL078C HMRA2P0CY13 119 aa4.23□□□□□ -1.73
MDH3YDL078C YKR032WP36127 104 aa4.23□□□□□ -1.73
MDH3YDL078C YBL081WP38180 368 aaKnown RBP4.23□□□□□ -1.73
MDH3YDL078C TOM7P53507 60 aa4.23□□□□□ -1.73
MDH3YDL078C COA3Q3E7B2 85 aa4.23□□□□□ -1.73
MDH3YDL078C YBR209WP38311 105 aa4.22□□□□□ -1.73
MDH3YDL078C TDA2P40045 126 aa4.22□□□□□ -1.73
MDH3YDL078C VTC1P40046 129 aaRIP-Chip data4.22□□□□□ -1.73not detected
MDH3YDL078C SPG1P50088 95 aa4.22□□□□□ -1.73
MDH3YDL078C YAL065CO13511 128 aa4.21□□□□□ -1.74
MDH3YDL078C YDL022C-AP0C5L6 82 aa4.21□□□□□ -1.74
MDH3YDL078C MSA2P36157 363 aa4.21□□□□□ -1.74
MDH3YDL078C HUR1P45820 110 aa4.21□□□□□ -1.74
MDH3YDL078C DAD4P69851 72 aa4.21□□□□□ -1.74
MDH3YDL078C SGF11Q03067 99 aa4.21□□□□□ -1.74
MDH3YDL078C VAM10Q08474 114 aa4.21□□□□□ -1.74
MDH3YDL078C YOR314WQ12506 109 aa4.21□□□□□ -1.74
MDH3YDL078C YLR285C-AQ3E771 56 aa4.21□□□□□ -1.74
MDH3YDL078C RPL26AP05743 127 aaKnown RBP4.2□□□□□ -1.74
MDH3YDL078C YHL005CP38752 130 aa4.2□□□□□ -1.74
MDH3YDL078C YKL065W-AQ2V2P2 73 aa4.2□□□□□ -1.74
MDH3YDL078C YDR246W-AQ3E763 66 aa4.2□□□□□ -1.74
MDH3YDL078C YCR001WP25347 104 aa4.19□□□□□ -1.74
MDH3YDL078C YGL193CP53097 103 aa4.19□□□□□ -1.74
MDH3YDL078C YOR268CQ08734 132 aa4.19□□□□□ -1.74
MDH3YDL078C ATP20Q12233 115 aa4.19□□□□□ -1.74
MDH3YDL078C YOR381W-AQ3E804 55 aa4.19□□□□□ -1.74
MDH3YDL078C AGA1P32323 725 aa4.18□□□□□ -1.74
MDH3YDL078C HUA1P40325 198 aa4.18□□□□□ -1.74
MDH3YDL078C YOR376W-AQ3E805 51 aa4.18□□□□□ -1.74
MDH3YDL078C YML100W-AQ8TGT0 57 aa4.18□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 53 ms