RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W YPT53P36019 220 aa1.53□□□□□ -2.16
NUP170YBL079W YKL070WP36087 169 aa1.53□□□□□ -2.16
NUP170YBL079W YIL024CP40543 189 aa1.53□□□□□ -2.16
NUP170YBL079W COA6Q3E846 104 aa1.53□□□□□ -2.16
NUP170YBL079W GLC8P41818 229 aa1.53□□□□□ -2.16
NUP170YBL079W YGL230CP53074 147 aa1.53□□□□□ -2.16
NUP170YBL079W PAU23Q07987 124 aa1.53□□□□□ -2.16
NUP170YBL079W CKS1P20486 150 aaKnown RBP1.53□□□□□ -2.16
NUP170YBL079W YCR043CP25361 127 aa1.53□□□□□ -2.16
NUP170YBL079W YKL044WP36092 106 aa1.52□□□□□ -2.17
NUP170YBL079W YHL005CP38752 130 aa1.52□□□□□ -2.17
NUP170YBL079W YHR130CP38834 111 aa1.52□□□□□ -2.17
NUP170YBL079W COX14P39103 70 aa1.52□□□□□ -2.17
NUP170YBL079W YPR195CQ06594 109 aa1.52□□□□□ -2.17
NUP170YBL079W CMC2Q3E7A4 109 aa1.52□□□□□ -2.17
NUP170YBL079W YER134CP40081 178 aa1.52□□□□□ -2.17
NUP170YBL079W OST2P46964 130 aa1.52□□□□□ -2.17
NUP170YBL079W ATP5P09457 212 aa1.52□□□□□ -2.17
NUP170YBL079W IGO2Q9P305 131 aa1.52□□□□□ -2.17
NUP170YBL079W YGL010WP25338 174 aa1.52□□□□□ -2.17
NUP170YBL079W DDR2P89113 61 aa1.52□□□□□ -2.17
NUP170YBL079W YEL008WP40001 126 aa1.51□□□□□ -2.17
NUP170YBL079W TDA2P40045 126 aa1.51□□□□□ -2.17
NUP170YBL079W MRPL11P36521 249 aaPredicted RBP1.51□□□□□ -2.17
NUP170YBL079W TIM11P81449 96 aaPredicted RBP1.51□□□□□ -2.17
NUP170YBL079W VMA9Q3E7B6 73 aa1.51□□□□□ -2.17
NUP170YBL079W ISD11Q6Q560 94 aa1.51□□□□□ -2.17
NUP170YBL079W NRG1Q03125 231 aa1.51□□□□□ -2.17
NUP170YBL079W YCR024C-BQ3E7Z8 88 aa1.5□□□□□ -2.17
NUP170YBL079W YNR034W-AQ3E841 98 aa1.5□□□□□ -2.17
NUP170YBL079W YOL097W-AQ3E7Y9 61 aa1.5□□□□□ -2.17
NUP170YBL079W YOL085CQ99345 113 aa1.5□□□□□ -2.17
NUP170YBL079W HHO1P53551 258 aa1.5□□□□□ -2.17
NUP170YBL079W SHH4Q06236 168 aa1.5□□□□□ -2.17
NUP170YBL079W RPL23AP0CX41 137 aaKnown RBP1.5□□□□□ -2.17
NUP170YBL079W RPL23BP0CX42 137 aaKnown RBP1.5□□□□□ -2.17
NUP170YBL079W FYV12Q08559 129 aa1.5□□□□□ -2.17
NUP170YBL079W YPR014CQ6B0W2 109 aa1.5□□□□□ -2.17
NUP170YBL079W YAL065CO13511 128 aa1.49□□□□□ -2.17
NUP170YBL079W FUN14P18411 198 aa1.49□□□□□ -2.17
NUP170YBL079W GSP2P32836 220 aaKnown RBP1.49□□□□□ -2.17
NUP170YBL079W HIT1P46973 164 aa1.49□□□□□ -2.17
NUP170YBL079W YNL122CP53921 115 aaPredicted RBP1.49□□□□□ -2.17
NUP170YBL079W ICY1Q04329 127 aa1.49□□□□□ -2.17
NUP170YBL079W YGL194C-AQ2V2P6 80 aa1.49□□□□□ -2.17
NUP170YBL079W RRT15Q3E811 62 aa1.49□□□□□ -2.17
NUP170YBL079W FYV4P38783 130 aaPredicted RBP1.49□□□□□ -2.17
NUP170YBL079W POP7P38291 140 aa1.49□□□□□ -2.17
NUP170YBL079W SNN1P48232 102 aa1.49□□□□□ -2.17
NUP170YBL079W TPT1Q12272 230 aaKnown RBP1.49□□□□□ -2.17
NUP170YBL079W YLL006W-AQ3E814 58 aa1.49□□□□□ -2.17
NUP170YBL079W YMR295CQ03559 197 aa1.48□□□□□ -2.17
NUP170YBL079W YOR072WQ08486 104 aa1.48□□□□□ -2.17
NUP170YBL079W FZF1P32805 299 aa1.48□□□□□ -2.17
NUP170YBL079W SRP14P38985 146 aa1.48□□□□□ -2.17
NUP170YBL079W YIA6P40556 373 aa1.48□□□□□ -2.17
NUP170YBL079W GTT1P40582 234 aa1.48□□□□□ -2.17
NUP170YBL079W YPL257WQ08974 193 aa1.48□□□□□ -2.17
NUP170YBL079W SCM4P32564 187 aa1.48□□□□□ -2.17
NUP170YBL079W YBL081WP38180 368 aaKnown RBP1.48□□□□□ -2.17
NUP170YBL079W YER085CP40058 173 aa1.48□□□□□ -2.17
NUP170YBL079W ATG8P38182 117 aaRIP-Chip data1.48□□□□□ -2.17not detected
NUP170YBL079W YEL067CP39978 195 aa1.48□□□□□ -2.17
NUP170YBL079W YML054C-AQ3E809 52 aa1.48□□□□□ -2.17
NUP170YBL079W YJL127C-BQ3E828 52 aa1.48□□□□□ -2.17
NUP170YBL079W FYV5P25585 152 aa1.47□□□□□ -2.17
NUP170YBL079W SEC11P15367 167 aa1.47□□□□□ -2.17
NUP170YBL079W PRE1P22141 198 aaKnown RBP1.47□□□□□ -2.17
NUP170YBL079W YHR139C-AO13536 103 aa1.47□□□□□ -2.17
NUP170YBL079W GSP1P32835 219 aaKnown RBP1.47□□□□□ -2.17
NUP170YBL079W RPL18AP0CX49 186 aaKnown RBP1.46□□□□□ -2.18
NUP170YBL079W RPL18BP0CX50 186 aaKnown RBP1.46□□□□□ -2.18
NUP170YBL079W RPS29BP41058 56 aaKnown RBP1.46□□□□□ -2.18
NUP170YBL079W YEL045CP32616 141 aa1.46□□□□□ -2.18
NUP170YBL079W EOS1P53938 366 aa1.46□□□□□ -2.18
NUP170YBL079W YPL261CQ08976 102 aa1.46□□□□□ -2.18
NUP170YBL079W RPS29AP41057 56 aaKnown RBP1.45□□□□□ -2.18
NUP170YBL079W YBR230W-AQ3E762 66 aa1.45□□□□□ -2.18
NUP170YBL079W BET1P22804 142 aa1.45□□□□□ -2.18
NUP170YBL079W YPL073CP40323 161 aa1.45□□□□□ -2.18
NUP170YBL079W VMA21P41806 77 aa1.45□□□□□ -2.18
NUP170YBL079W AIM11P87275 137 aa1.45□□□□□ -2.18
NUP170YBL079W ATP14Q12349 124 aa1.45□□□□□ -2.18
NUP170YBL079W RAD6P06104 172 aa1.44□□□□□ -2.18
NUP170YBL079W YFR057WP43625 151 aa1.44□□□□□ -2.18
NUP170YBL079W YGL088WP53151 121 aa1.44□□□□□ -2.18
NUP170YBL079W RPL36BO14455 100 aaKnown RBP1.44□□□□□ -2.18
NUP170YBL079W KRE1P17260 313 aa1.44□□□□□ -2.18
NUP170YBL079W YGR025WP53216 100 aa1.43□□□□□ -2.18
NUP170YBL079W YMR103CQ04436 120 aa1.43□□□□□ -2.18
NUP170YBL079W ATP15P21306 62 aa1.43□□□□□ -2.18
NUP170YBL079W MSA2P36157 363 aa1.43□□□□□ -2.18
NUP170YBL079W POP3P53833 195 aaPredicted RBP1.43□□□□□ -2.18
NUP170YBL079W BNS1P50084 137 aa1.43□□□□□ -2.18
NUP170YBL079W FMP16Q12497 93 aa1.43□□□□□ -2.18
NUP170YBL079W CYT2Q00873 224 aa1.42□□□□□ -2.18
NUP170YBL079W IRC21Q04772 201 aa1.42□□□□□ -2.18
NUP170YBL079W MSL1P40567 111 aaPredicted RBP1.42□□□□□ -2.18
NUP170YBL079W CUE4Q04201 117 aaPredicted RBP1.42□□□□□ -2.18
NUP170YBL079W YDL157CQ12082 118 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms