RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	SEC16	P48415	2195 aa	Known RBP	3.04	□□□□□ -1.92
PIM1	YBL022C	MED6	P38782	295 aa		3.04	□□□□□ -1.92
PIM1	YBL022C	RGM1	Q00453	211 aa		3.04	□□□□□ -1.92
PIM1	YBL022C	BLM10	P43583	2143 aa		3.04	□□□□□ -1.92
PIM1	YBL022C	RPB9	P27999	122 aa		3.04	□□□□□ -1.92
PIM1	YBL022C	YAR029W	P39549	74 aa		3.04	□□□□□ -1.92
PIM1	YBL022C	MMS2	P53152	137 aa		3.04	□□□□□ -1.92
PIM1	YBL022C	YOR008C-A	Q3E7B9	74 aa		3.04	□□□□□ -1.92
PIM1	YBL022C	BRR2	P32639	2163 aa	Known RBP	3.04	□□□□□ -1.92
PIM1	YBL022C	YEL045C	P32616	141 aa		3.03	□□□□□ -1.92
PIM1	YBL022C	YNL234W	P53857	426 aa		3.03	□□□□□ -1.92
PIM1	YBL022C	ICY1	Q04329	127 aa		3.03	□□□□□ -1.92
PIM1	YBL022C	SPG4	Q04438	115 aa		3.03	□□□□□ -1.92
PIM1	YBL022C	PBP4	Q07362	185 aa	Known RBP	3.03	□□□□□ -1.92
PIM1	YBL022C	PBA1	Q05778	276 aa		3.03	□□□□□ -1.92
PIM1	YBL022C	YBR200W-A	Q3E755	54 aa		3.03	□□□□□ -1.92
PIM1	YBL022C	BET1	P22804	142 aa		3.03	□□□□□ -1.92
PIM1	YBL022C	YBR209W	P38311	105 aa		3.03	□□□□□ -1.92
PIM1	YBL022C	PEX17	P40155	199 aa		3.03	□□□□□ -1.92
PIM1	YBL022C	URM1	P40554	99 aa	Predicted RBP	3.03	□□□□□ -1.92
PIM1	YBL022C	WWM1	P43582	211 aa	Known RBP	3.03	□□□□□ -1.92
PIM1	YBL022C	YDR209C	Q03480	137 aa		3.02	□□□□□ -1.93
PIM1	YBL022C	MIC10	Q96VH5	97 aa		3.02	□□□□□ -1.93
PIM1	YBL022C	ATP20	Q12233	115 aa		3.02	□□□□□ -1.93
PIM1	YBL022C	YDR182W-A	Q3E796	67 aa		3.02	□□□□□ -1.93
PIM1	YBL022C	PEX22	P39718	180 aa		3.02	□□□□□ -1.93
PIM1	YBL022C	RPL11B	Q3E757	174 aa	Predicted RBP	3.02	□□□□□ -1.93
PIM1	YBL022C	ICS3	P47034	131 aa		3.01	□□□□□ -1.93
PIM1	YBL022C	YDR274C	P87283	123 aa		3.01	□□□□□ -1.93
PIM1	YBL022C	IRC21	Q04772	201 aa		3.01	□□□□□ -1.93
PIM1	YBL022C	EMC6	Q12431	108 aa		3.01	□□□□□ -1.93
PIM1	YBL022C	YOR314W	Q12506	109 aa		3.01	□□□□□ -1.93
PIM1	YBL022C	YOR034C-A	Q3E735	80 aa		3.01	□□□□□ -1.93
PIM1	YBL022C	HUR1	P45820	110 aa		3.01	□□□□□ -1.93
PIM1	YBL022C	CCW12	Q12127	133 aa		3	□□□□□ -1.93
PIM1	YBL022C	AIM4	P38305	123 aa	Predicted RBP	3	□□□□□ -1.93
PIM1	YBL022C	YFR035C	P43608	114 aa		3	□□□□□ -1.93
PIM1	YBL022C	YGL034C	P53186	121 aa		3	□□□□□ -1.93
PIM1	YBL022C	BEM2	P39960	2167 aa	Known RBP	3	□□□□□ -1.93
PIM1	YBL022C	NOP10	Q6Q547	58 aa	Predicted RBP	3	□□□□□ -1.93
PIM1	YBL022C	YFR009W-A	P0C5M9	85 aa		2.99	□□□□□ -1.93
PIM1	YBL022C	YOL085C	Q99345	113 aa		2.99	□□□□□ -1.93
PIM1	YBL022C	TOR1	P35169	2470 aa		2.99	□□□□□ -1.93
PIM1	YBL022C	RNH203	Q12338	110 aa		2.99	□□□□□ -1.93
PIM1	YBL022C	AIR2	Q12476	344 aa	Known RBP	2.99	□□□□□ -1.93
PIM1	YBL022C	RPL11A	P0C0W9	174 aa	Known RBP	2.99	□□□□□ -1.93
PIM1	YBL022C	YLR285C-A	Q3E771	56 aa		2.99	□□□□□ -1.93
PIM1	YBL022C	ACC1	Q00955	2233 aa	Known RBP	2.98	□□□□□ -1.93
PIM1	YBL022C	QCR8	P08525	94 aa		2.98	□□□□□ -1.93
PIM1	YBL022C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.98	□□□□□ -1.93	not detected
PIM1	YBL022C	YEL008W	P40001	126 aa		2.98	□□□□□ -1.93
PIM1	YBL022C	IRA1	P18963	3092 aa		2.98	□□□□□ -1.93
PIM1	YBL022C	YBR219C	P38317	127 aa		2.97	□□□□□ -1.93
PIM1	YBL022C	YHL005C	P38752	130 aa		2.97	□□□□□ -1.93
PIM1	YBL022C	YPR013C	Q12145	317 aa		2.97	□□□□□ -1.93
PIM1	YBL022C	RPL36B	O14455	100 aa	Known RBP	2.97	□□□□□ -1.93
PIM1	YBL022C	RPL36A	P05745	100 aa	Predicted RBP	2.97	□□□□□ -1.93
PIM1	YBL022C	KEG1	P43614	200 aa		2.97	□□□□□ -1.93
PIM1	YBL022C	RPL15A	P05748	204 aa	Known RBP	2.97	□□□□□ -1.93
PIM1	YBL022C	MRPL39	P36533	70 aa		2.97	□□□□□ -1.93
PIM1	YBL022C	YPS5	P53057	165 aa		2.97	□□□□□ -1.93
PIM1	YBL022C	TOS8	P53147	276 aa		2.97	□□□□□ -1.93
PIM1	YBL022C	YGL193C	P53097	103 aa		2.96	□□□□□ -1.94
PIM1	YBL022C	ATP18	P81450	59 aa		2.96	□□□□□ -1.94
PIM1	YBL022C	RRT1	P38192	103 aa		2.96	□□□□□ -1.94
PIM1	YBL022C	COX14	P39103	70 aa		2.96	□□□□□ -1.94
PIM1	YBL022C	YBL081W	P38180	368 aa	Known RBP	2.95	□□□□□ -1.94
PIM1	YBL022C	RPR2	P40571	144 aa		2.95	□□□□□ -1.94
PIM1	YBL022C	SIP18	P50263	79 aa		2.95	□□□□□ -1.94
PIM1	YBL022C	YOR032W-A	Q8TGS1	66 aa		2.95	□□□□□ -1.94
PIM1	YBL022C	YJR107C-A	P0CT86	78 aa		2.95	□□□□□ -1.94
PIM1	YBL022C	YOL014W	Q08110	124 aa		2.94	□□□□□ -1.94
PIM1	YBL022C	YOR020W-A	Q3E824	90 aa		2.94	□□□□□ -1.94
PIM1	YBL022C	RPL39	P04650	51 aa		2.94	□□□□□ -1.94
PIM1	YBL022C	YER188C-A	P0C0V2	99 aa		2.94	□□□□□ -1.94
PIM1	YBL022C	MPC3	P53311	146 aa		2.94	□□□□□ -1.94
PIM1	YBL022C	YMR295C	Q03559	197 aa		2.94	□□□□□ -1.94
PIM1	YBL022C	CRC1	Q12289	327 aa		2.94	□□□□□ -1.94
PIM1	YBL022C	MRP10	O75012	95 aa		2.93	□□□□□ -1.94
PIM1	YBL022C	UTH1	P36135	365 aa		2.93	□□□□□ -1.94
PIM1	YBL022C	RPL26A	P05743	127 aa	Known RBP	2.93	□□□□□ -1.94
PIM1	YBL022C	RSM18	P40033	138 aa		2.92	□□□□□ -1.94
PIM1	YBL022C	YOR376W-A	Q3E805	51 aa		2.92	□□□□□ -1.94
PIM1	YBL022C	YMR122C	Q03879	124 aa		2.91	□□□□□ -1.94
PIM1	YBL022C	YMR244W	Q04018	355 aa		2.91	□□□□□ -1.94
PIM1	YBL022C	YKL065W-A	Q2V2P2	73 aa		2.91	□□□□□ -1.94
PIM1	YBL022C	YOR381W-A	Q3E804	55 aa		2.91	□□□□□ -1.94
PIM1	YBL022C	RPL26B	P53221	127 aa	Known RBP	2.91	□□□□□ -1.94
PIM1	YBL022C	YLL006W-A	Q3E814	58 aa		2.91	□□□□□ -1.94
PIM1	YBL022C	YML100W-A	Q8TGT0	57 aa		2.91	□□□□□ -1.94
PIM1	YBL022C	SEN1	Q00416	2231 aa	Known RBP	2.9	□□□□□ -1.95
PIM1	YBL022C	RPL29	P05747	59 aa	Predicted RBP	2.9	□□□□□ -1.95
PIM1	YBL022C	POR2	P40478	281 aa		2.9	□□□□□ -1.95
PIM1	YBL022C	SPO24	Q3E752	67 aa		2.9	□□□□□ -1.95
PIM1	YBL022C	YNL146C-A	Q3E7Z1	64 aa		2.9	□□□□□ -1.95
PIM1	YBL022C	MRPL38	P35996	138 aa	Predicted RBP	2.9	□□□□□ -1.95
PIM1	YBL022C	RPS30A	P0CX33	63 aa	Known RBP	2.89	□□□□□ -1.95
PIM1	YBL022C	RPS30B	P0CX34	63 aa	Known RBP	2.89	□□□□□ -1.95
PIM1	YBL022C	YMR122W-A	Q3E842	84 aa		2.89	□□□□□ -1.95
PIM1	YBL022C	RPS23A	P0CX29	145 aa	Known RBP	2.88	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms