RNA–Protein interactions for RNA: Q0140

VAR1, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene VAR1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAR1Q0140 TY1B-DR6P0C2I3 1755 aa-4.56□□□□□ -3.14
VAR1Q0140 TY1B-LR2P0C2I5 1755 aa-4.56□□□□□ -3.14
VAR1Q0140 TY1B-PR1P0C2I9 1755 aaKnown RBP-4.56□□□□□ -3.14
VAR1Q0140 TY1B-JR1P47098 1755 aa-4.56□□□□□ -3.14
VAR1Q0140 TY1B-JR2P47100 1755 aaKnown RBP-4.56□□□□□ -3.14
VAR1Q0140 TY1B-ML2Q03434 1755 aaKnown RBP-4.56□□□□□ -3.14
VAR1Q0140 TY1B-ER1Q03612 1755 aa-4.56□□□□□ -3.14
VAR1Q0140 TY1B-DR1Q03855 1755 aa-4.56□□□□□ -3.14
VAR1Q0140 TY1B-MR2Q04670 1755 aaKnown RBP-4.56□□□□□ -3.14
VAR1Q0140 TY1B-ML1Q04711 1755 aaKnown RBP-4.56□□□□□ -3.14
VAR1Q0140 TY1B-GR1Q12141 1755 aa-4.56□□□□□ -3.14
VAR1Q0140 TY1B-GR2Q12269 1755 aa-4.56□□□□□ -3.14
VAR1Q0140 TY1B-OLQ12273 1755 aa-4.56□□□□□ -3.14
VAR1Q0140 TY1B-PLQ12414 1755 aaKnown RBP-4.56□□□□□ -3.14
VAR1Q0140 TY1B-ORQ92393 1755 aa-4.56□□□□□ -3.14
VAR1Q0140 TY1B-DR3Q99231 1755 aa-4.56□□□□□ -3.14
VAR1Q0140 SPC2Q04969 178 aa-4.58□□□□□ -3.14
VAR1Q0140 TOR2P32600 2474 aaKnown RBP-4.6□□□□□ -3.15
VAR1Q0140 GCN1P33892 2672 aaKnown RBP-4.62□□□□□ -3.15
VAR1Q0140 TY1B-MR1Q04214 1755 aa-4.63□□□□□ -3.15
VAR1Q0140 TY1B-NL1Q12112 1755 aa-4.63□□□□□ -3.15
VAR1Q0140 TY1B-GR3Q12316 1755 aa-4.63□□□□□ -3.15
VAR1Q0140 SPC1P46965 94 aa-4.63□□□□□ -3.15
VAR1Q0140 YOS1Q3E834 85 aa-4.63□□□□□ -3.15
VAR1Q0140 NHP10Q03435 203 aa-4.66□□□□□ -3.16
VAR1Q0140 LYS2P07702 1392 aa-4.67□□□□□ -3.16
VAR1Q0140 YBR090CP38253 122 aa-4.68□□□□□ -3.16
VAR1Q0140 ATP18P81450 59 aa-4.69□□□□□ -3.16
VAR1Q0140 YMR122W-AQ3E842 84 aa-4.7□□□□□ -3.16
VAR1Q0140 YHR214C-DP0CX93 97 aa-4.71□□□□□ -3.16
VAR1Q0140 STT4P37297 1900 aa-4.74□□□□□ -3.17
VAR1Q0140 TY2B-LR1P0C2J3 1770 aa-4.77□□□□□ -3.17
VAR1Q0140 TY2B-FP0CX63 1770 aa-4.77□□□□□ -3.17
VAR1Q0140 TY2B-GR2P0CX64 1770 aa-4.77□□□□□ -3.17
VAR1Q0140 TY2B-CP25384 1770 aa-4.77□□□□□ -3.17
VAR1Q0140 TY2B-DR2Q03494 1770 aa-4.77□□□□□ -3.17
VAR1Q0140 TY2B-DR3Q07791 1770 aaKnown RBP-4.77□□□□□ -3.17
VAR1Q0140 TY2B-OR1Q12113 1770 aa-4.77□□□□□ -3.17
VAR1Q0140 TY2B-DR1Q12472 1770 aa-4.77□□□□□ -3.17
VAR1Q0140 TY2B-BQ12491 1770 aa-4.77□□□□□ -3.17
VAR1Q0140 TY2B-OR2Q12501 1770 aa-4.77□□□□□ -3.17
VAR1Q0140 DYN1P36022 4092 aa-4.78□□□□□ -3.17
VAR1Q0140 GNA1P43577 159 aaPredicted RBP-4.79□□□□□ -3.18
VAR1Q0140 YBR032WP38223 100 aa-4.8□□□□□ -3.18
VAR1Q0140 YCR085WP25650 117 aa-4.81□□□□□ -3.18
VAR1Q0140 YPR108W-AQ3E7B3 70 aa-4.81□□□□□ -3.18
VAR1Q0140 YAL065CO13511 128 aa-4.82□□□□□ -3.18
VAR1Q0140 YHR050W-AQ05451 56 aa-4.83□□□□□ -3.18
VAR1Q0140 UBC5P15732 148 aa-4.84□□□□□ -3.18
VAR1Q0140 TY1B-ER2Q03619 1755 aa-4.84□□□□□ -3.18
VAR1Q0140 TY1B-LR1Q12088 1755 aaKnown RBP-4.84□□□□□ -3.18
VAR1Q0140 RSM19P53733 91 aaPredicted RBP-4.85□□□□□ -3.19
VAR1Q0140 YDR182W-AQ3E796 67 aa-4.85□□□□□ -3.19
VAR1Q0140 UBC4P15731 148 aa-4.86□□□□□ -3.19
VAR1Q0140 BSC4P53841 131 aa-4.87□□□□□ -3.19
VAR1Q0140 YHL005CP38752 130 aa-4.88□□□□□ -3.19
VAR1Q0140 EMC5P40540 141 aa-4.9□□□□□ -3.19
VAR1Q0140 TY3B-IQ7LHG5 1498 aaKnown RBP-4.99□□□□□ -3.21
VAR1Q0140 YOR289WQ12012 251 aaPredicted RBP-4.99□□□□□ -3.21
VAR1Q0140 YER039C-AP0CD97 72 aa-5□□□□□ -3.21
VAR1Q0140 YMR090WQ04304 227 aaKnown RBP-5□□□□□ -3.21
VAR1Q0140 YMR103CQ04436 120 aa-5□□□□□ -3.21
VAR1Q0140 YKL018C-AQ3E7A7 99 aa-5.01□□□□□ -3.21
VAR1Q0140 YOR008C-AQ3E7B9 74 aa-5.01□□□□□ -3.21
VAR1Q0140 HMRA1P0CY11 126 aa-5.04□□□□□ -3.22
VAR1Q0140 SNU13P39990 126 aaKnown RBP-5.04□□□□□ -3.22
VAR1Q0140 ECM29P38737 1868 aa-5.05□□□□□ -3.22
VAR1Q0140 SPP41P38904 1435 aa-5.06□□□□□ -3.22
VAR1Q0140 MOT1P32333 1867 aa-5.09□□□□□ -3.22
VAR1Q0140 QCR6P00127 147 aa-5.09□□□□□ -3.22
VAR1Q0140 SPO14P36126 1683 aa-5.11□□□□□ -3.23
VAR1Q0140 FPR2P32472 135 aa-5.12□□□□□ -3.23
VAR1Q0140 YOL097W-AQ3E7Y9 61 aa-5.12□□□□□ -3.23
VAR1Q0140 TY1B-NL2Q99337 1749 aaKnown RBP-5.14□□□□□ -3.23
VAR1Q0140 WIP1Q2V2P8 89 aa-5.14□□□□□ -3.23
VAR1Q0140 VTH1P40438 1549 aa-5.14□□□□□ -3.23
VAR1Q0140 VTH2P40890 1549 aa-5.14□□□□□ -3.23
VAR1Q0140 MEC1P38111 2368 aa-5.18□□□□□ -3.24
VAR1Q0140 PAU23Q07987 124 aa-5.23□□□□□ -3.25
VAR1Q0140 PAU17Q12370 124 aa-5.23□□□□□ -3.25
VAR1Q0140 NHP2P32495 156 aaPredicted RBP-5.24□□□□□ -3.25
VAR1Q0140 YDR029WQ12111 104 aa-5.24□□□□□ -3.25
VAR1Q0140 RRT15Q3E811 62 aa-5.24□□□□□ -3.25
VAR1Q0140 KSH1Q8TGJ3 72 aa-5.25□□□□□ -3.25
VAR1Q0140 YKL068W-AQ3E826 78 aa-5.27□□□□□ -3.25
VAR1Q0140 TOS6P48560 102 aa-5.28□□□□□ -3.25
VAR1Q0140 SIP18P50263 79 aa-5.29□□□□□ -3.26
VAR1Q0140 GEA1P47102 1408 aaPredicted RBP-5.31□□□□□ -3.26
VAR1Q0140 RPO21P04050 1733 aaKnown RBP-5.35□□□□□ -3.27
VAR1Q0140 FYV7Q12247 151 aa-5.36□□□□□ -3.27
VAR1Q0140 XRN1P22147 1528 aaKnown RBP-5.39□□□□□ -3.27
VAR1Q0140 LHP1P33399 275 aaKnown RBP-5.4□□□□□ -3.27
VAR1Q0140 POL1P13382 1468 aa-5.4□□□□□ -3.27
VAR1Q0140 YOR304C-AO14468 76 aa-5.41□□□□□ -3.28
VAR1Q0140 RPS27AP35997 82 aaKnown RBP-5.42□□□□□ -3.28
VAR1Q0140 MHF2Q3E829 80 aa-5.42□□□□□ -3.28
VAR1Q0140 NOP10Q6Q547 58 aaPredicted RBP-5.45□□□□□ -3.28
VAR1Q0140 PDR11P40550 1411 aa-5.46□□□□□ -3.28
VAR1Q0140 UTP10P42945 1769 aaKnown RBP-5.5□□□□□ -3.29
VAR1Q0140 RPA190P10964 1664 aaKnown RBP-5.51□□□□□ -3.29
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms