RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C YDR119W-AQ2V2P9 66 aa7.54□□□□□ -1.2
SSN3YPL042C NSA2P40078 261 aaKnown RBP7.54□□□□□ -1.2
SSN3YPL042C YLR112WQ12130 139 aa7.54□□□□□ -1.2
SSN3YPL042C ATO3Q12359 275 aa7.54□□□□□ -1.2
SSN3YPL042C FLO5P38894 1075 aa7.52□□□□□ -1.21
SSN3YPL042C MIC10Q96VH5 97 aa7.52□□□□□ -1.21
SSN3YPL042C URA2P07259 2214 aaKnown RBP7.52□□□□□ -1.21
SSN3YPL042C QCR9P22289 66 aa7.51□□□□□ -1.21
SSN3YPL042C NRG2P38082 220 aa7.51□□□□□ -1.21
SSN3YPL042C PAU15P40585 124 aa7.5□□□□□ -1.21
SSN3YPL042C YFR035CP43608 114 aa7.5□□□□□ -1.21
SSN3YPL042C YDL157CQ12082 118 aa7.5□□□□□ -1.21
SSN3YPL042C RPL16AP26784 199 aaKnown RBP7.49□□□□□ -1.21
SSN3YPL042C YKR045CP36138 183 aa7.49□□□□□ -1.21
SSN3YPL042C TDA8Q6B2U8 126 aa7.49□□□□□ -1.21
SSN3YPL042C YFR032C-BQ8TGU2 87 aa7.49□□□□□ -1.21
SSN3YPL042C RPS8AP0CX39 200 aaKnown RBP7.48□□□□□ -1.21
SSN3YPL042C RPS8BP0CX40 200 aaKnown RBP7.48□□□□□ -1.21
SSN3YPL042C YBL059WP34224 193 aa7.48□□□□□ -1.21
SSN3YPL042C AVO2Q04749 426 aa7.48□□□□□ -1.21
SSN3YPL042C YPT10P38146 199 aa7.47□□□□□ -1.21
SSN3YPL042C LST8P41318 303 aa7.47□□□□□ -1.21
SSN3YPL042C SWT21P53873 357 aaPredicted RBP7.47□□□□□ -1.21
SSN3YPL042C YMR175W-AQ3E766 64 aa7.47□□□□□ -1.21
SSN3YPL042C YMR316C-AI2HB70 103 aa7.47□□□□□ -1.21
SSN3YPL042C SOD1P00445 154 aaKnown RBP7.47□□□□□ -1.21
SSN3YPL042C YCR041WP37265 110 aa7.47□□□□□ -1.21
SSN3YPL042C SKI6P46948 246 aaPredicted RBP7.47□□□□□ -1.21
SSN3YPL042C PAU4P53427 120 aa7.47□□□□□ -1.21
SSN3YPL042C YMR007WQ03675 126 aa7.47□□□□□ -1.21
SSN3YPL042C YHP1Q04116 353 aa7.47□□□□□ -1.21
SSN3YPL042C FPR2P32472 135 aa7.46□□□□□ -1.22
SSN3YPL042C MIC27P50945 234 aa7.46□□□□□ -1.22
SSN3YPL042C AIR2Q12476 344 aaKnown RBP7.45□□□□□ -1.22
SSN3YPL042C RRT15Q3E811 62 aa7.45□□□□□ -1.22
SSN3YPL042C PAU1P0CE88 120 aa7.44□□□□□ -1.22
SSN3YPL042C PAU14P0CE89 120 aa7.44□□□□□ -1.22
SSN3YPL042C PAU6P0CE90 120 aa7.44□□□□□ -1.22
SSN3YPL042C PAU18P0CE91 120 aa7.44□□□□□ -1.22
SSN3YPL042C PAU8P0CE92 120 aa7.44□□□□□ -1.22
SSN3YPL042C PAU11P0CE93 120 aa7.44□□□□□ -1.22
SSN3YPL042C PAU13P38725 120 aa7.44□□□□□ -1.22
SSN3YPL042C PAU10Q03050 120 aa7.44□□□□□ -1.22
SSN3YPL042C YDR042CQ03205 200 aa7.44□□□□□ -1.22
SSN3YPL042C PAU20Q08322 120 aa7.44□□□□□ -1.22
SSN3YPL042C DAD1Q12248 94 aa7.44□□□□□ -1.22
SSN3YPL042C PAU9Q3E770 120 aa7.44□□□□□ -1.22
SSN3YPL042C PIS1P06197 220 aaKnown RBP7.44□□□□□ -1.22
SSN3YPL042C YBL071CP38185 102 aa7.44□□□□□ -1.22
SSN3YPL042C YAR068WP39564 161 aa7.44□□□□□ -1.22
SSN3YPL042C YNL200CP40165 246 aaKnown RBP7.44□□□□□ -1.22
SSN3YPL042C TOM6P33448 61 aa7.43□□□□□ -1.22
SSN3YPL042C YCL021W-AQ96VH3 125 aa7.43□□□□□ -1.22
SSN3YPL042C YIL102C-AQ2V2P5 75 aa7.42□□□□□ -1.22
SSN3YPL042C PAU19P0CE85 124 aa7.41□□□□□ -1.22
SSN3YPL042C PAU21P0CE86 164 aa7.41□□□□□ -1.22
SSN3YPL042C PAU22P0CE87 164 aa7.41□□□□□ -1.22
SSN3YPL042C DDR48P18899 430 aaKnown RBP7.41□□□□□ -1.22
SSN3YPL042C PAU3P25610 124 aa7.41□□□□□ -1.22
SSN3YPL042C RSM19P53733 91 aaPredicted RBP7.41□□□□□ -1.22
SSN3YPL042C YOL014WQ08110 124 aa7.41□□□□□ -1.22
SSN3YPL042C YER145C-AA0A023PYF4 145 aa7.41□□□□□ -1.22
SSN3YPL042C YCR022CP25620 114 aa7.41□□□□□ -1.22
SSN3YPL042C MRPS9P38120 278 aa7.41□□□□□ -1.22
SSN3YPL042C EDC2P40023 145 aaPredicted RBP7.41□□□□□ -1.22
SSN3YPL042C YAL064WP39711 94 aa7.4□□□□□ -1.23
SSN3YPL042C SPG1P50088 95 aa7.4□□□□□ -1.23
SSN3YPL042C YML100W-AQ8TGT0 57 aa7.4□□□□□ -1.23
SSN3YPL042C RPB9P27999 122 aa7.39□□□□□ -1.23
SSN3YPL042C YFL019CP43576 117 aa7.39□□□□□ -1.23
SSN3YPL042C BNS1P50084 137 aa7.39□□□□□ -1.23
SSN3YPL042C YCL042WP25572 119 aa7.38□□□□□ -1.23
SSN3YPL042C YLR363W-AQ3E747 85 aa7.38□□□□□ -1.23
SSN3YPL042C MRPL38P35996 138 aaPredicted RBP7.38□□□□□ -1.23
SSN3YPL042C FYV4P38783 130 aaPredicted RBP7.38□□□□□ -1.23
SSN3YPL042C POP3P53833 195 aaPredicted RBP7.38□□□□□ -1.23
SSN3YPL042C YLR296WQ05898 108 aa7.38□□□□□ -1.23
SSN3YPL042C EMC6Q12431 108 aa7.38□□□□□ -1.23
SSN3YPL042C RRT1P38192 103 aa7.37□□□□□ -1.23
SSN3YPL042C YER135CP40082 130 aa7.37□□□□□ -1.23
SSN3YPL042C YFL041W-AQ3E817 63 aa7.37□□□□□ -1.23
SSN3YPL042C YBL008W-AQ3E821 79 aa7.37□□□□□ -1.23
SSN3YPL042C SNF11P38956 169 aa7.36□□□□□ -1.23
SSN3YPL042C URM1P40554 99 aaPredicted RBP7.36□□□□□ -1.23
SSN3YPL042C IRC23Q08416 157 aa7.36□□□□□ -1.23
SSN3YPL042C RPS22AP0C0W1 130 aaKnown RBP7.35□□□□□ -1.23
SSN3YPL042C BET1P22804 142 aa7.35□□□□□ -1.23
SSN3YPL042C YAL063C-AQ3E791 96 aa7.35□□□□□ -1.23
SSN3YPL042C YEL045CP32616 141 aa7.35□□□□□ -1.23
SSN3YPL042C SRL1Q08673 210 aa7.35□□□□□ -1.23
SSN3YPL042C TDA2P40045 126 aa7.34□□□□□ -1.23
SSN3YPL042C HAL1Q01766 294 aa7.33□□□□□ -1.24
SSN3YPL042C RPL23AP0CX41 137 aaKnown RBP7.32□□□□□ -1.24
SSN3YPL042C RPL23BP0CX42 137 aaKnown RBP7.32□□□□□ -1.24
SSN3YPL042C YML122CQ03207 126 aa7.32□□□□□ -1.24
SSN3YPL042C FYV12Q08559 129 aa7.32□□□□□ -1.24
SSN3YPL042C AYT1Q12226 474 aa7.32□□□□□ -1.24
SSN3YPL042C YHR213WP0CI67 198 aa7.32□□□□□ -1.24
SSN3YPL042C PAU16P35994 123 aa7.32□□□□□ -1.24
SSN3YPL042C YNL217WP40152 326 aa7.32□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 143.3 ms