RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C CYB5P40312 120 aa2.95□□□□□ -1.94
SNF8YPL002C YMR082CQ04276 118 aa2.95□□□□□ -1.94
SNF8YPL002C PAM17P36147 197 aa2.94□□□□□ -1.94
SNF8YPL002C PET8P38921 284 aa2.94□□□□□ -1.94
SNF8YPL002C SNF11P38956 169 aa2.94□□□□□ -1.94
SNF8YPL002C YAR068WP39564 161 aa2.94□□□□□ -1.94
SNF8YPL002C YER134CP40081 178 aa2.94□□□□□ -1.94
SNF8YPL002C YNL200CP40165 246 aaKnown RBP2.94□□□□□ -1.94
SNF8YPL002C EMC5P40540 141 aa2.94□□□□□ -1.94
SNF8YPL002C YPR013CQ12145 317 aa2.94□□□□□ -1.94
SNF8YPL002C YOR011W-AQ3E807 68 aa2.94□□□□□ -1.94
SNF8YPL002C YIL134C-AQ45U18 67 aa2.94□□□□□ -1.94
SNF8YPL002C RPL16AP26784 199 aaKnown RBP2.93□□□□□ -1.94
SNF8YPL002C AGA2P32781 87 aa2.93□□□□□ -1.94
SNF8YPL002C MIX23P38162 196 aa2.93□□□□□ -1.94
SNF8YPL002C SMD3P43321 101 aaKnown RBP2.93□□□□□ -1.94
SNF8YPL002C YGL193CP53097 103 aa2.93□□□□□ -1.94
SNF8YPL002C EST3Q03096 181 aa2.93□□□□□ -1.94
SNF8YPL002C VAM10Q08474 114 aa2.93□□□□□ -1.94
SNF8YPL002C YGL258W-AQ3E740 77 aa2.93□□□□□ -1.94
SNF8YPL002C SUS1Q6WNK7 96 aa2.93□□□□□ -1.94
SNF8YPL002C KSH1Q8TGJ3 72 aa2.93□□□□□ -1.94
SNF8YPL002C ADH3P07246 375 aaKnown RBP2.92□□□□□ -1.94
SNF8YPL002C ATX1P38636 73 aa2.92□□□□□ -1.94
SNF8YPL002C HTD2P38790 280 aaKnown RBP2.92□□□□□ -1.94
SNF8YPL002C EDC2P40023 145 aaPredicted RBP2.92□□□□□ -1.94
SNF8YPL002C SPG1P50088 95 aa2.92□□□□□ -1.94
SNF8YPL002C SDS23P53172 527 aa2.92□□□□□ -1.94
SNF8YPL002C SMD1Q02260 146 aaPredicted RBP2.92□□□□□ -1.94
SNF8YPL002C PAU23Q07987 124 aa2.92□□□□□ -1.94
SNF8YPL002C PAU17Q12370 124 aa2.92□□□□□ -1.94
SNF8YPL002C YNR034W-AQ3E841 98 aa2.92□□□□□ -1.94
SNF8YPL002C TDA8Q6B2U8 126 aa2.92□□□□□ -1.94
SNF8YPL002C RPL23AP0CX41 137 aaKnown RBP2.91□□□□□ -1.94
SNF8YPL002C RPL23BP0CX42 137 aaKnown RBP2.91□□□□□ -1.94
SNF8YPL002C DDR48P18899 430 aaKnown RBP2.91□□□□□ -1.94
SNF8YPL002C YCR001WP25347 104 aa2.91□□□□□ -1.94
SNF8YPL002C YCR050CP25630 102 aa2.91□□□□□ -1.94
SNF8YPL002C YBL059WP34224 193 aa2.91□□□□□ -1.94
SNF8YPL002C YBL071CP38185 102 aa2.91□□□□□ -1.94
SNF8YPL002C DSK2P48510 373 aa2.91□□□□□ -1.94
SNF8YPL002C UBC4P15731 148 aa2.9□□□□□ -1.95
SNF8YPL002C YCR085WP25650 117 aa2.9□□□□□ -1.95
SNF8YPL002C SMP1P38128 452 aa2.9□□□□□ -1.95
SNF8YPL002C TDA2P40045 126 aa2.9□□□□□ -1.95
SNF8YPL002C NSA2P40078 261 aaKnown RBP2.9□□□□□ -1.95
SNF8YPL002C CYT2Q00873 224 aa2.9□□□□□ -1.95
SNF8YPL002C GPI19Q04082 140 aa2.9□□□□□ -1.95
SNF8YPL002C PBA1Q05778 276 aa2.9□□□□□ -1.95
SNF8YPL002C ANT1Q06497 328 aa2.9□□□□□ -1.95
SNF8YPL002C YPR195CQ06594 109 aa2.9□□□□□ -1.95
SNF8YPL002C NAT5Q08689 176 aa2.9□□□□□ -1.95
SNF8YPL002C PRM7Q12459 698 aa2.9□□□□□ -1.95
SNF8YPL002C YCR024C-BQ3E7Z8 88 aa2.9□□□□□ -1.95
SNF8YPL002C YOR376W-AQ3E805 51 aa2.9□□□□□ -1.95
SNF8YPL002C YBL008W-AQ3E821 79 aa2.9□□□□□ -1.95
SNF8YPL002C YFR032C-BQ8TGU2 87 aa2.9□□□□□ -1.95
SNF8YPL002C RPS25BP0C0T4 108 aaKnown RBP2.89□□□□□ -1.95
SNF8YPL002C URA5P13298 226 aaKnown RBP2.89□□□□□ -1.95
SNF8YPL002C ATG8P38182 117 aaRIP-Chip data2.89□□□□□ -1.95not detected
SNF8YPL002C YHL018WP38744 120 aaPredicted RBP2.89□□□□□ -1.95
SNF8YPL002C YFL019CP43576 117 aa2.89□□□□□ -1.95
SNF8YPL002C KNH1P50112 268 aa2.89□□□□□ -1.95
SNF8YPL002C YMR244WQ04018 355 aa2.89□□□□□ -1.95
SNF8YPL002C RRT7Q07829 113 aa2.89□□□□□ -1.95
SNF8YPL002C ATG41Q12048 136 aa2.89□□□□□ -1.95
SNF8YPL002C YNL146C-AQ3E7Z1 64 aa2.89□□□□□ -1.95
SNF8YPL002C POR1P04840 283 aaKnown RBP2.88□□□□□ -1.95
SNF8YPL002C RPS11AP0CX47 156 aaKnown RBP2.88□□□□□ -1.95
SNF8YPL002C RPS11BP0CX48 156 aaKnown RBP2.88□□□□□ -1.95
SNF8YPL002C MID2P36027 376 aa2.88□□□□□ -1.95
SNF8YPL002C FYV4P38783 130 aaPredicted RBP2.88□□□□□ -1.95
SNF8YPL002C MIG3P39943 394 aa2.88□□□□□ -1.95
SNF8YPL002C YER135CP40082 130 aa2.88□□□□□ -1.95
SNF8YPL002C MRPS8Q03799 155 aa2.88□□□□□ -1.95
SNF8YPL002C DAD1Q12248 94 aa2.88□□□□□ -1.95
SNF8YPL002C VMA9Q3E7B6 73 aa2.88□□□□□ -1.95
SNF8YPL002C YOR020W-AQ3E824 90 aa2.88□□□□□ -1.95
SNF8YPL002C MIC10Q96VH5 97 aa2.88□□□□□ -1.95
SNF8YPL002C ENV10Q99382 181 aa2.88□□□□□ -1.95
SNF8YPL002C PIS1P06197 220 aaKnown RBP2.87□□□□□ -1.95
SNF8YPL002C YJL197C-AP0C5P0 93 aa2.87□□□□□ -1.95
SNF8YPL002C KRE1P17260 313 aa2.87□□□□□ -1.95
SNF8YPL002C BET1P22804 142 aa2.87□□□□□ -1.95
SNF8YPL002C MRPL27P36526 146 aaPredicted RBP2.87□□□□□ -1.95
SNF8YPL002C SVP26P38869 228 aa2.87□□□□□ -1.95
SNF8YPL002C COX14P39103 70 aa2.87□□□□□ -1.95
SNF8YPL002C YAL064WP39711 94 aa2.87□□□□□ -1.95
SNF8YPL002C YPR145C-AQ2V2P0 78 aa2.87□□□□□ -1.95
SNF8YPL002C YML100W-AQ8TGT0 57 aa2.87□□□□□ -1.95
SNF8YPL002C HHF1P02309 103 aaKnown RBP2.86□□□□□ -1.95
SNF8YPL002C FPR2P32472 135 aa2.86□□□□□ -1.95
SNF8YPL002C VMA21P41806 77 aa2.86□□□□□ -1.95
SNF8YPL002C RSM19P53733 91 aaPredicted RBP2.86□□□□□ -1.95
SNF8YPL002C SYM1Q06563 197 aa2.86□□□□□ -1.95
SNF8YPL002C LCL2Q08045 131 aa2.86□□□□□ -1.95
SNF8YPL002C YOL014WQ08110 124 aa2.86□□□□□ -1.95
SNF8YPL002C EMC6Q12431 108 aa2.86□□□□□ -1.95
SNF8YPL002C DFM1Q12743 341 aaKnown RBP2.86□□□□□ -1.95
SNF8YPL002C RPS25AQ3E792 108 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms