RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W SKI6P46948 246 aaPredicted RBP1.81□□□□□ -2.12
UBP15YMR304W GIS2P53849 153 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
UBP15YMR304W PAU10Q03050 120 aa1.81□□□□□ -2.12
UBP15YMR304W INP1Q03694 420 aa1.81□□□□□ -2.12
UBP15YMR304W IRC25Q07951 179 aa1.81□□□□□ -2.12
UBP15YMR304W PAU20Q08322 120 aa1.81□□□□□ -2.12
UBP15YMR304W NIP7Q08962 181 aaKnown RBP1.81□□□□□ -2.12
UBP15YMR304W YOR343CQ12484 108 aa1.81□□□□□ -2.12
UBP15YMR304W PAU9Q3E770 120 aa1.81□□□□□ -2.12
UBP15YMR304W HTL1Q9URQ5 78 aa1.81□□□□□ -2.12
UBP15YMR304W PFY1P07274 126 aa1.81□□□□□ -2.12
UBP15YMR304W ARC40P38328 384 aaKnown RBP1.81□□□□□ -2.12
UBP15YMR304W ATP19P81451 68 aa1.81□□□□□ -2.12
UBP15YMR304W SRL1Q08673 210 aa1.81□□□□□ -2.12
UBP15YMR304W YDR029WQ12111 104 aa1.81□□□□□ -2.12
UBP15YMR304W RRT15Q3E811 62 aa1.81□□□□□ -2.12
UBP15YMR304W CBP4P37267 147 aa1.81□□□□□ -2.12
UBP15YMR304W ATX1P38636 73 aa1.81□□□□□ -2.12
UBP15YMR304W YPS5P53057 165 aa1.81□□□□□ -2.12
UBP15YMR304W SED1Q01589 338 aa1.81□□□□□ -2.12
UBP15YMR304W YOR314WQ12506 109 aa1.81□□□□□ -2.12
UBP15YMR304W YDR182W-AQ3E796 67 aa1.81□□□□□ -2.12
UBP15YMR304W MIC10Q96VH5 97 aa1.81□□□□□ -2.12
UBP15YMR304W PIS1P06197 220 aaKnown RBP1.8□□□□□ -2.12
UBP15YMR304W INO4P13902 151 aa1.8□□□□□ -2.12
UBP15YMR304W RAD6P06104 172 aa1.8□□□□□ -2.12
UBP15YMR304W PCL5P38794 229 aa1.8□□□□□ -2.12
UBP15YMR304W RPL42AP0CX27 106 aaKnown RBP1.8□□□□□ -2.12
UBP15YMR304W RPL42BP0CX28 106 aaKnown RBP1.8□□□□□ -2.12
UBP15YMR304W RPL14AP36105 138 aaKnown RBP1.8□□□□□ -2.12
UBP15YMR304W SIM1P40472 476 aa1.8□□□□□ -2.12
UBP15YMR304W FHN1P53279 174 aa1.8□□□□□ -2.12
UBP15YMR304W RNH203Q12338 110 aa1.8□□□□□ -2.12
UBP15YMR304W YMR316C-AI2HB70 103 aa1.79□□□□□ -2.12
UBP15YMR304W YHR139C-AO13536 103 aa1.79□□□□□ -2.12
UBP15YMR304W YCR043CP25361 127 aa1.79□□□□□ -2.12
UBP15YMR304W MRPL39P36533 70 aa1.79□□□□□ -2.12
UBP15YMR304W HUR1P45820 110 aa1.79□□□□□ -2.12
UBP15YMR304W YDR274CP87283 123 aa1.79□□□□□ -2.12
UBP15YMR304W RGM1Q00453 211 aa1.79□□□□□ -2.12
UBP15YMR304W ICY1Q04329 127 aa1.79□□□□□ -2.12
UBP15YMR304W API2Q04413 109 aa1.79□□□□□ -2.12
UBP15YMR304W SME1Q12330 94 aaPredicted RBP1.79□□□□□ -2.12
UBP15YMR304W TRP1P00912 224 aa1.79□□□□□ -2.12
UBP15YMR304W ADK1P07170 222 aaKnown RBP1.79□□□□□ -2.12
UBP15YMR304W RPL16BP26785 198 aaKnown RBP1.79□□□□□ -2.12
UBP15YMR304W ERG2P32352 222 aa1.79□□□□□ -2.12
UBP15YMR304W YPR011CQ12251 326 aa1.79□□□□□ -2.12
UBP15YMR304W MTC7P32633 139 aa1.79□□□□□ -2.12
UBP15YMR304W DFG10P40526 253 aa1.79□□□□□ -2.12
UBP15YMR304W TOS6P48560 102 aa1.79□□□□□ -2.12
UBP15YMR304W YLR042CQ07990 161 aa1.79□□□□□ -2.12
UBP15YMR304W FYV12Q08559 129 aa1.79□□□□□ -2.12
UBP15YMR304W CDC39P25655 2108 aaKnown RBP1.79□□□□□ -2.12
UBP15YMR304W AQY1P0CD91 305 aa1.78□□□□□ -2.12
UBP15YMR304W MRPL31P14063 131 aaPredicted RBP1.78□□□□□ -2.12
UBP15YMR304W RPB11P38902 120 aa1.78□□□□□ -2.12
UBP15YMR304W CWP2P43497 92 aa1.78□□□□□ -2.12
UBP15YMR304W WWM1P43582 211 aaKnown RBP1.78□□□□□ -2.12
UBP15YMR304W PET8P38921 284 aa1.78□□□□□ -2.12
UBP15YMR304W RRT13P40042 185 aa1.78□□□□□ -2.12
UBP15YMR304W YGR039WP53225 103 aa1.78□□□□□ -2.12
UBP15YMR304W MET31Q03081 177 aa1.78□□□□□ -2.12
UBP15YMR304W ARF1P11076 181 aaKnown RBP1.78□□□□□ -2.13
UBP15YMR304W YIL014C-AQ02598 104 aa1.78□□□□□ -2.13
UBP15YMR304W DIF1O13577 133 aa1.77□□□□□ -2.13
UBP15YMR304W YAR029WP39549 74 aa1.77□□□□□ -2.13
UBP15YMR304W SCS22Q6Q595 175 aa1.77□□□□□ -2.13
UBP15YMR304W YBL081WP38180 368 aaKnown RBP1.77□□□□□ -2.13
UBP15YMR304W LSM2P38203 95 aaKnown RBP1.77□□□□□ -2.13
UBP15YMR304W BOL2P53082 120 aa1.77□□□□□ -2.13
UBP15YMR304W YOL118CQ08259 102 aa1.77□□□□□ -2.13
UBP15YMR304W PPT2Q12036 173 aa1.77□□□□□ -2.13
UBP15YMR304W BLM10P43583 2143 aa1.77□□□□□ -2.13
UBP15YMR304W YHR173CP38864 112 aa1.77□□□□□ -2.13
UBP15YMR304W YER187WP40102 141 aa1.77□□□□□ -2.13
UBP15YMR304W COA3Q3E7B2 85 aa1.77□□□□□ -2.13
UBP15YMR304W VPS13Q07878 3144 aa1.77□□□□□ -2.13
UBP15YMR304W ASK1P35734 292 aa1.76□□□□□ -2.13
UBP15YMR304W YOR186WQ08560 144 aa1.76□□□□□ -2.13
UBP15YMR304W ICS3P47034 131 aa1.76□□□□□ -2.13
UBP15YMR304W YMR244WQ04018 355 aa1.76□□□□□ -2.13
UBP15YMR304W YBR144CP34215 104 aa1.76□□□□□ -2.13
UBP15YMR304W IMP2P46972 177 aa1.76□□□□□ -2.13
UBP15YMR304W YGL118CP53132 145 aa1.76□□□□□ -2.13
UBP15YMR304W TSC3Q3E790 80 aa1.76□□□□□ -2.13
UBP15YMR304W YLR365WQ7LIF2 110 aa1.76□□□□□ -2.13
UBP15YMR304W VTC1P40046 129 aaRIP-Chip data1.75□□□□□ -2.13not detected
UBP15YMR304W ERI1P62651 68 aaKnown RBP1.75□□□□□ -2.13
UBP15YMR304W GPI19Q04082 140 aa1.75□□□□□ -2.13
UBP15YMR304W YOR015WQ12169 119 aa1.75□□□□□ -2.13
UBP15YMR304W TIR2P33890 251 aa1.75□□□□□ -2.13
UBP15YMR304W YGL010WP25338 174 aa1.75□□□□□ -2.13
UBP15YMR304W FPR2P32472 135 aa1.75□□□□□ -2.13
UBP15YMR304W TIM22Q12328 207 aa1.75□□□□□ -2.13
UBP15YMR304W YKL065W-AQ2V2P2 73 aa1.75□□□□□ -2.13
UBP15YMR304W NHP2P32495 156 aaPredicted RBP1.74□□□□□ -2.13
UBP15YMR304W YPI1P43587 155 aa1.74□□□□□ -2.13
UBP15YMR304W PCL9Q12477 304 aa1.74□□□□□ -2.13
UBP15YMR304W NCA3P46955 337 aa1.74□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms